RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 PUM3Q15397 648 aaKnown RBP6.01□□□□□ -1.45
VPS41-205ENST00000414632 ATP2B3Q16720 1220 aa6.01□□□□□ -1.45
VPS41-205ENST00000414632 KIF4BQ2VIQ3 1234 aa6.01□□□□□ -1.45
VPS41-205ENST00000414632 TTC39BQ5VTQ0 682 aaPredicted RBP6.01□□□□□ -1.45
VPS41-205ENST00000414632 TTLL5Q6EMB2 1281 aa6.01□□□□□ -1.45
VPS41-205ENST00000414632 USP50Q70EL3 339 aaPredicted RBP6.01□□□□□ -1.45
VPS41-205ENST00000414632 DPH6Q7L8W6 267 aa6.01□□□□□ -1.45
VPS41-205ENST00000414632 PNMA8AQ86V59 439 aaPredicted RBP6.01□□□□□ -1.45
VPS41-205ENST00000414632 VPS37DQ86XT2 251 aa6.01□□□□□ -1.45
VPS41-205ENST00000414632 CNTROBQ8N137 903 aa6.01□□□□□ -1.45
VPS41-205ENST00000414632 CERS5Q8N5B7 392 aa6.01□□□□□ -1.45
VPS41-205ENST00000414632 GLIS2Q9BZE0 524 aaPredicted RBP6.01□□□□□ -1.45
VPS41-205ENST00000414632 ZCCHC2Q9C0B9 1178 aaKnown RBP6.01□□□□□ -1.45
VPS41-205ENST00000414632 RUBCNLQ9H714 662 aa6.01□□□□□ -1.45
VPS41-205ENST00000414632 C11orf16Q9NQ32 467 aa6.01□□□□□ -1.45
VPS41-205ENST00000414632 COPRSQ9NQ92 184 aa6.01□□□□□ -1.45
VPS41-205ENST00000414632 HDAC5Q9UQL6 1122 aa6.01□□□□□ -1.45
VPS41-205ENST00000414632 COL1A1P02452 1464 aaPredicted RBP6.01□□□□□ -1.45
VPS41-205ENST00000414632 ZNF609O15014 1411 aa6□□□□□ -1.45
VPS41-205ENST00000414632 PCNTO95613 3336 aa6□□□□□ -1.45
VPS41-205ENST00000414632 AK9Q5TCS8 1911 aa6□□□□□ -1.45
VPS41-205ENST00000414632 AKAP11Q9UKA4 1901 aa6□□□□□ -1.45
VPS41-205ENST00000414632 ADM5C9JUS6 153 aa6□□□□□ -1.45
VPS41-205ENST00000414632 FRAT2O75474 233 aaPredicted RBP6□□□□□ -1.45
VPS41-205ENST00000414632 SURF6O75683 361 aaKnown RBP6□□□□□ -1.45
VPS41-205ENST00000414632 CIAO1O76071 339 aa6□□□□□ -1.45
VPS41-205ENST00000414632 F11P03951 625 aa6□□□□□ -1.45
VPS41-205ENST00000414632 IFIT1P09914 478 aaKnown RBP6□□□□□ -1.45
VPS41-205ENST00000414632 SLC5A1P13866 664 aa6□□□□□ -1.45
VPS41-205ENST00000414632 IL1R1P14778 569 aa6□□□□□ -1.45
VPS41-205ENST00000414632 FGFR2P21802 821 aa6□□□□□ -1.45
VPS41-205ENST00000414632 RPS12P25398 132 aaKnown RBP6□□□□□ -1.45
VPS41-205ENST00000414632 IL15P40933 162 aaPredicted RBP6□□□□□ -1.45
VPS41-205ENST00000414632 RRP1P56182 461 aaKnown RBP6□□□□□ -1.45
VPS41-205ENST00000414632 TIMM10P62072 90 aa6□□□□□ -1.45
VPS41-205ENST00000414632 ATP8B2P98198 1209 aa6□□□□□ -1.45
VPS41-205ENST00000414632 G3BP1Q13283 466 aaKnown RBP eCLIP6□□□□□ -1.45
VPS41-205ENST00000414632 MTX1Q13505 466 aa6□□□□□ -1.45
VPS41-205ENST00000414632 SCARF1Q14162 830 aa6□□□□□ -1.45
VPS41-205ENST00000414632 GRIK5Q16478 980 aa6□□□□□ -1.45
VPS41-205ENST00000414632 NBPF9Q3BBW0 867 aa6□□□□□ -1.45
VPS41-205ENST00000414632 STRIP1Q5VSL9 837 aa6□□□□□ -1.45
VPS41-205ENST00000414632 CEP85Q6P2H3 762 aa6□□□□□ -1.45
VPS41-205ENST00000414632 C15orf52Q6ZUT6 534 aaKnown RBP6□□□□□ -1.45
VPS41-205ENST00000414632 GOLGA6L2Q8N9W4 650 aaPredicted RBP6□□□□□ -1.45
VPS41-205ENST00000414632 AGBL3Q8NEM8 1001 aa6□□□□□ -1.45
VPS41-205ENST00000414632 DPF2Q92785 391 aa6□□□□□ -1.45
VPS41-205ENST00000414632 NEUROD6Q96NK8 337 aa6□□□□□ -1.45
VPS41-205ENST00000414632 CRISPLD1Q9H336 500 aa6□□□□□ -1.45
VPS41-205ENST00000414632 SUV39H2Q9H5I1 410 aa6□□□□□ -1.45
VPS41-205ENST00000414632 ZNF408Q9H9D4 720 aa6□□□□□ -1.45
VPS41-205ENST00000414632 MYOZ2Q9NPC6 264 aa6□□□□□ -1.45
VPS41-205ENST00000414632 BRD7Q9NPI1 651 aa6□□□□□ -1.45
VPS41-205ENST00000414632 PPP4R2Q9NY27 417 aa6□□□□□ -1.45
VPS41-205ENST00000414632 EXOC6BQ9Y2D4 811 aa6□□□□□ -1.45
VPS41-205ENST00000414632 MAST2Q6P0Q8 1798 aa6□□□□□ -1.45
VPS41-205ENST00000414632 AOX1Q06278 1338 aa5.99□□□□□ -1.45
VPS41-205ENST00000414632 PASKQ96RG2 1323 aa5.99□□□□□ -1.45
VPS41-205ENST00000414632 CDK5RAP2Q96SN8 1893 aa5.99□□□□□ -1.45
VPS41-205ENST00000414632 A0A1B0GUL7 405 aa5.99□□□□□ -1.45
VPS41-205ENST00000414632 SASH3O75995 380 aa5.99□□□□□ -1.45
VPS41-205ENST00000414632 PHKA1P46020 1223 aa5.99□□□□□ -1.45
VPS41-205ENST00000414632 RBM5P52756 815 aaKnown RBP eCLIP5.99□□□□□ -1.45
VPS41-205ENST00000414632 GRM2Q14416 872 aa5.99□□□□□ -1.45
VPS41-205ENST00000414632 CAVIN4Q5BKX8 364 aa5.99□□□□□ -1.45
VPS41-205ENST00000414632 MFSD14BQ5SR56 506 aa5.99□□□□□ -1.45
VPS41-205ENST00000414632 SAMD5Q5TGI4 173 aa5.99□□□□□ -1.45
VPS41-205ENST00000414632 ANGEL2Q5VTE6 544 aaKnown RBP5.99□□□□□ -1.45
VPS41-205ENST00000414632 NLRP8Q86W28 1048 aa5.99□□□□□ -1.45
VPS41-205ENST00000414632 PGBD3Q8N328 593 aa5.99□□□□□ -1.45
VPS41-205ENST00000414632 TDRD7Q8NHU6 1098 aaKnown RBP5.99□□□□□ -1.45
VPS41-205ENST00000414632 SSH3Q8TE77 659 aa5.99□□□□□ -1.45
VPS41-205ENST00000414632 LPIN2Q92539 896 aa5.99□□□□□ -1.45
VPS41-205ENST00000414632 SPATA32Q96LK8 384 aa5.99□□□□□ -1.45
VPS41-205ENST00000414632 GGA3Q9NZ52 723 aa5.99□□□□□ -1.45
VPS41-205ENST00000414632 DDX19BQ9UMR2 479 aa5.99□□□□□ -1.45
VPS41-205ENST00000414632 DYRK1BQ9Y463 629 aa5.99□□□□□ -1.45
VPS41-205ENST00000414632 FAM205AQ6ZU69 1335 aa5.99□□□□□ -1.45
VPS41-205ENST00000414632 MYO3BQ8WXR4 1341 aa5.99□□□□□ -1.45
VPS41-205ENST00000414632 OTOFQ9HC10 1997 aa5.98□□□□□ -1.45
VPS41-205ENST00000414632 DOCK2Q92608 1830 aa5.98□□□□□ -1.45
VPS41-205ENST00000414632 A0A1W2PP55 124 aa5.98□□□□□ -1.45
VPS41-205ENST00000414632 CLRN2A0PK11 232 aa5.98□□□□□ -1.45
VPS41-205ENST00000414632 CYP2E1P05181 493 aaPredicted RBP5.98□□□□□ -1.45
VPS41-205ENST00000414632 GSTT1P30711 240 aa5.98□□□□□ -1.45
VPS41-205ENST00000414632 ZNF280AP59817 542 aaPredicted RBP5.98□□□□□ -1.45
VPS41-205ENST00000414632 IRX6P78412 446 aaPredicted RBP5.98□□□□□ -1.45
VPS41-205ENST00000414632 GRM1Q13255 1194 aa5.98□□□□□ -1.45
VPS41-205ENST00000414632 PDE3AQ14432 1141 aa5.98□□□□□ -1.45
VPS41-205ENST00000414632 CFAP100Q494V2 611 aa5.98□□□□□ -1.45
VPS41-205ENST00000414632 GORABQ5T7V8 394 aa5.98□□□□□ -1.45
VPS41-205ENST00000414632 KIAA0319Q5VV43 1072 aa5.98□□□□□ -1.45
VPS41-205ENST00000414632 PRAMEF18Q5VWM3 479 aa5.98□□□□□ -1.45
VPS41-205ENST00000414632 ERMP1Q7Z2K6 904 aa5.98□□□□□ -1.45
VPS41-205ENST00000414632 SIRT2Q8IXJ6 389 aa5.98□□□□□ -1.45
VPS41-205ENST00000414632 ARMC5Q96C12 935 aa5.98□□□□□ -1.45
VPS41-205ENST00000414632 CRBNQ96SW2 442 aa5.98□□□□□ -1.45
VPS41-205ENST00000414632 GAS2L1Q99501 681 aaPredicted RBP5.98□□□□□ -1.45
VPS41-205ENST00000414632 LNPKQ9C0E8 428 aa5.98□□□□□ -1.45
VPS41-205ENST00000414632 CCDC8Q9H0W5 538 aaPredicted RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms