RNA–Protein interactions for RNA: ENST00000414416.2

LINC00116-201, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene LINC00116, Length 2,051 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-201ENST00000414416 ATG4CQ96DT6 458 aa17.78■□□□□ 0.44
LINC00116-201ENST00000414416 MTMR8Q96EF0 704 aa17.78■□□□□ 0.44
LINC00116-201ENST00000414416 ORC3Q9UBD5 711 aaPredicted RBP17.78■□□□□ 0.44
LINC00116-201ENST00000414416 ZBTB5O15062 677 aa17.77■□□□□ 0.44
LINC00116-201ENST00000414416 DEXIO95424 95 aa17.77■□□□□ 0.44
LINC00116-201ENST00000414416 SNAP25P60880 206 aa17.77■□□□□ 0.44
LINC00116-201ENST00000414416 IFNL1Q8IU54 200 aa17.77■□□□□ 0.44
LINC00116-201ENST00000414416 P2RX7Q99572 595 aaKnown RBP17.77■□□□□ 0.44
LINC00116-201ENST00000414416 RANBP17Q9H2T7 1088 aaKnown RBP17.77■□□□□ 0.44
LINC00116-201ENST00000414416 RLFQ13129 1914 aa17.77■□□□□ 0.44
LINC00116-201ENST00000414416 PNMA6FA0A0J9YX94 578 aa17.76■□□□□ 0.43
LINC00116-201ENST00000414416 IGF2BP3O00425 579 aaKnown RBP eCLIP17.76■□□□□ 0.43
LINC00116-201ENST00000414416 VWA5AO00534 786 aa17.76■□□□□ 0.43
LINC00116-201ENST00000414416 FDX1P10109 184 aa17.76■□□□□ 0.43
LINC00116-201ENST00000414416 FDPSP14324 419 aaKnown RBP17.76■□□□□ 0.43
LINC00116-201ENST00000414416 GJB2P29033 226 aa17.76■□□□□ 0.43
LINC00116-201ENST00000414416 TM4SF4P48230 202 aa17.76■□□□□ 0.43
LINC00116-201ENST00000414416 VEGFBP49765 207 aa17.76■□□□□ 0.43
LINC00116-201ENST00000414416 HERVK_113P62684 666 aa17.76■□□□□ 0.43
LINC00116-201ENST00000414416 FOXD4L5Q5VV16 416 aaPredicted RBP17.76■□□□□ 0.43
LINC00116-201ENST00000414416 OTUD7BQ6GQQ9 843 aa17.76■□□□□ 0.43
LINC00116-201ENST00000414416 FOXD4L4Q8WXT5 416 aaPredicted RBP17.76■□□□□ 0.43
LINC00116-201ENST00000414416 ZCCHC17Q9NP64 241 aaKnown RBP17.76■□□□□ 0.43
LINC00116-201ENST00000414416 CTDP1Q9Y5B0 961 aaPredicted RBP17.76■□□□□ 0.43
LINC00116-201ENST00000414416 ZBED4O75132 1171 aa17.76■□□□□ 0.43
LINC00116-201ENST00000414416 CYP2C8P10632 490 aa17.76■□□□□ 0.43
LINC00116-201ENST00000414416 NUCB2P80303 420 aa17.76■□□□□ 0.43
LINC00116-201ENST00000414416 QRICH1Q2TAL8 776 aa17.76■□□□□ 0.43
LINC00116-201ENST00000414416 FAM184AQ8NB25 1140 aa17.76■□□□□ 0.43
LINC00116-201ENST00000414416 SLC38A10Q9HBR0 1119 aa17.76■□□□□ 0.43
LINC00116-201ENST00000414416 ADAMTS5Q9UNA0 930 aa17.76■□□□□ 0.43
LINC00116-201ENST00000414416 PFKFB3Q16875 520 aaPredicted RBP17.75■□□□□ 0.43
LINC00116-201ENST00000414416 REM2Q8IYK8 340 aaPredicted RBP17.75■□□□□ 0.43
LINC00116-201ENST00000414416 SMCR8Q8TEV9 937 aaPredicted RBP17.75■□□□□ 0.43
LINC00116-201ENST00000414416 WASF1Q92558 559 aa17.75■□□□□ 0.43
LINC00116-201ENST00000414416 PARK7Q99497 189 aaKnown RBP17.75■□□□□ 0.43
LINC00116-201ENST00000414416 KIF3AQ9Y496 699 aa17.75■□□□□ 0.43
LINC00116-201ENST00000414416 SCG2P13521 617 aa17.75■□□□□ 0.43
LINC00116-201ENST00000414416 MCM4P33991 863 aa17.75■□□□□ 0.43
LINC00116-201ENST00000414416 PKN1Q16512 942 aa17.75■□□□□ 0.43
LINC00116-201ENST00000414416 CCDC174Q6PII3 467 aa17.75■□□□□ 0.43
LINC00116-201ENST00000414416 LBX2Q6XYB7 198 aa17.75■□□□□ 0.43
LINC00116-201ENST00000414416 MB21D1Q8N884 522 aa17.75■□□□□ 0.43
LINC00116-201ENST00000414416 MYH6P13533 1939 aa17.74■□□□□ 0.43
LINC00116-201ENST00000414416 MAP2K2P36507 400 aa17.74■□□□□ 0.43
LINC00116-201ENST00000414416 HEATR3Q7Z4Q2 680 aa17.73■□□□□ 0.43
LINC00116-201ENST00000414416 CPXCR1Q8N123 301 aa17.73■□□□□ 0.43
LINC00116-201ENST00000414416 GTF3C2Q8WUA4 911 aaPredicted RBP17.73■□□□□ 0.43
LINC00116-201ENST00000414416 CHAMP1Q96JM3 812 aa17.73■□□□□ 0.43
LINC00116-201ENST00000414416 ALG1Q9BT22 464 aa17.73■□□□□ 0.43
LINC00116-201ENST00000414416 AMNQ9BXJ7 453 aa17.73■□□□□ 0.43
LINC00116-201ENST00000414416 PPP1R11O60927 126 aaPredicted RBP17.73■□□□□ 0.43
LINC00116-201ENST00000414416 TAF1CQ15572 869 aaPredicted RBP17.73■□□□□ 0.43
LINC00116-201ENST00000414416 FBXO11Q86XK2 927 aa17.73■□□□□ 0.43
LINC00116-201ENST00000414416 REPS2Q8NFH8 660 aa17.73■□□□□ 0.43
LINC00116-201ENST00000414416 GPKOWQ92917 476 aaPredicted RBP eCLIP17.73■□□□□ 0.43
LINC00116-201ENST00000414416 AIFM3Q96NN9 605 aa17.73■□□□□ 0.43
LINC00116-201ENST00000414416 BRD1O95696 1058 aa17.72■□□□□ 0.43
LINC00116-201ENST00000414416 ICAM1P05362 532 aa17.72■□□□□ 0.43
LINC00116-201ENST00000414416 TMEM132BQ14DG7 1078 aa17.72■□□□□ 0.43
LINC00116-201ENST00000414416 WWC2Q6AWC2 1192 aa17.72■□□□□ 0.43
LINC00116-201ENST00000414416 POTEEQ6S8J3 1075 aa17.72■□□□□ 0.43
LINC00116-201ENST00000414416 PAGR1Q9BTK6 254 aa17.72■□□□□ 0.43
LINC00116-201ENST00000414416 RAVER2Q9HCJ3 691 aaKnown RBP17.72■□□□□ 0.43
LINC00116-201ENST00000414416 ZNF536O15090 1300 aa17.72■□□□□ 0.43
LINC00116-201ENST00000414416 A0A0G2JMZ2 1700 aa17.72■□□□□ 0.43
LINC00116-201ENST00000414416 COL11A1P12107 1806 aaPredicted RBP17.72■□□□□ 0.43
LINC00116-201ENST00000414416 hCG_1984214I3L0E3 225 aa17.71■□□□□ 0.43
LINC00116-201ENST00000414416 ALDH1A1P00352 501 aa17.71■□□□□ 0.43
LINC00116-201ENST00000414416 XBP1P17861 261 aa17.71■□□□□ 0.43
LINC00116-201ENST00000414416 OAZ1P54368 228 aa17.71■□□□□ 0.43
LINC00116-201ENST00000414416 TRAF1Q13077 416 aa17.71■□□□□ 0.43
LINC00116-201ENST00000414416 USH1GQ495M9 461 aa17.71■□□□□ 0.43
LINC00116-201ENST00000414416 ZNF713Q8N859 430 aaPredicted RBP17.71■□□□□ 0.43
LINC00116-201ENST00000414416 COA7Q96BR5 231 aa17.71■□□□□ 0.43
LINC00116-201ENST00000414416 AGBL1Q96MI9 1066 aa17.71■□□□□ 0.43
LINC00116-201ENST00000414416 BARHL2Q9NY43 387 aa17.71■□□□□ 0.43
LINC00116-201ENST00000414416 BTBD7Q9P203 1132 aa17.71■□□□□ 0.43
LINC00116-201ENST00000414416 PNMA2Q9UL42 364 aa17.71■□□□□ 0.43
LINC00116-201ENST00000414416 ZNF214Q9UL59 606 aaPredicted RBP17.71■□□□□ 0.43
LINC00116-201ENST00000414416 CCPG1Q9ULG6 757 aa17.71■□□□□ 0.43
LINC00116-201ENST00000414416 RABGAP1Q9Y3P9 1069 aa17.71■□□□□ 0.43
LINC00116-201ENST00000414416 PCDHA1Q9Y5I3 950 aa17.71■□□□□ 0.43
LINC00116-201ENST00000414416 ATP2A1O14983 1001 aa17.71■□□□□ 0.43
LINC00116-201ENST00000414416 GCLCP48506 637 aaPredicted RBP17.71■□□□□ 0.43
LINC00116-201ENST00000414416 PLS1Q14651 629 aa17.71■□□□□ 0.43
LINC00116-201ENST00000414416 VPS54Q9P1Q0 977 aa17.71■□□□□ 0.43
LINC00116-201ENST00000414416 SYT1P21579 422 aa17.7■□□□□ 0.42
LINC00116-201ENST00000414416 FOSBP53539 338 aa17.7■□□□□ 0.42
LINC00116-201ENST00000414416 LARP1BQ659C4 914 aaKnown RBP17.7■□□□□ 0.42
LINC00116-201ENST00000414416 SNRNP48Q6IEG0 339 aaKnown RBP17.7■□□□□ 0.42
LINC00116-201ENST00000414416 C8orf76Q96K31 380 aa17.7■□□□□ 0.42
LINC00116-201ENST00000414416 TEX13BQ9BXU2 312 aa17.7■□□□□ 0.42
LINC00116-201ENST00000414416 TXNRD2Q9NNW7 524 aa17.7■□□□□ 0.42
LINC00116-201ENST00000414416 RBPJLQ9UBG7 517 aa17.7■□□□□ 0.42
LINC00116-201ENST00000414416 STXBP3O00186 592 aa17.7■□□□□ 0.42
LINC00116-201ENST00000414416 PEX10O60683 326 aa17.7■□□□□ 0.42
LINC00116-201ENST00000414416 CNMDO75829 334 aa17.7■□□□□ 0.42
LINC00116-201ENST00000414416 BAG4O95429 457 aaKnown RBP17.7■□□□□ 0.42
LINC00116-201ENST00000414416 PDCP20941 246 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms