RNA–Protein interactions for RNA: ENST00000413358.6

HCG18-234, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 916 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-234ENST00000413358 HOMER1Q86YM7 354 aa10.36□□□□□ -0.75
HCG18-234ENST00000413358 SRBD1Q8N5C6 995 aaKnown RBP10.36□□□□□ -0.75
HCG18-234ENST00000413358 PROCA1Q8NCQ7 364 aaPredicted RBP10.36□□□□□ -0.75
HCG18-234ENST00000413358 PIBF1Q8WXW3 757 aa10.36□□□□□ -0.75
HCG18-234ENST00000413358 WASF1Q92558 559 aa10.36□□□□□ -0.75
HCG18-234ENST00000413358 SPZ1Q9BXG8 430 aa10.36□□□□□ -0.75
HCG18-234ENST00000413358 RNF26Q9BY78 433 aaPredicted RBP10.36□□□□□ -0.75
HCG18-234ENST00000413358 UBA5Q9GZZ9 404 aa10.36□□□□□ -0.75
HCG18-234ENST00000413358 EMILIN3Q9NT22 766 aa10.36□□□□□ -0.75
HCG18-234ENST00000413358 FAM217BQ9NTX9 383 aaPredicted RBP10.36□□□□□ -0.75
HCG18-234ENST00000413358 ORC3Q9UBD5 711 aaPredicted RBP10.36□□□□□ -0.75
HCG18-234ENST00000413358 FEM1BQ9UK73 627 aa10.36□□□□□ -0.75
HCG18-234ENST00000413358 PTPRFP10586 1907 aa10.36□□□□□ -0.75
HCG18-234ENST00000413358 FLOT1O75955 427 aa10.35□□□□□ -0.75
HCG18-234ENST00000413358 ECM2O94769 699 aaPredicted RBP10.35□□□□□ -0.75
HCG18-234ENST00000413358 DEXIO95424 95 aa10.35□□□□□ -0.75
HCG18-234ENST00000413358 CTDNEP1O95476 244 aa10.35□□□□□ -0.75
HCG18-234ENST00000413358 PSMC4P43686 418 aa10.35□□□□□ -0.75
HCG18-234ENST00000413358 UBXN2AP68543 259 aa10.35□□□□□ -0.75
HCG18-234ENST00000413358 IRX3P78415 501 aaPredicted RBP10.35□□□□□ -0.75
HCG18-234ENST00000413358 PABPC4Q13310 644 aaKnown RBP eCLIP10.35□□□□□ -0.75
HCG18-234ENST00000413358 TTBK2Q6IQ55 1244 aa10.35□□□□□ -0.75
HCG18-234ENST00000413358 FASTKD5Q7L8L6 764 aaKnown RBP10.35□□□□□ -0.75
HCG18-234ENST00000413358 ANKRD23Q86SG2 305 aa10.35□□□□□ -0.75
HCG18-234ENST00000413358 SMARCC2Q8TAQ2 1214 aa10.35□□□□□ -0.75
HCG18-234ENST00000413358 SH3TC2Q8TF17 1288 aa10.35□□□□□ -0.75
HCG18-234ENST00000413358 CHURC1Q8WUH1 139 aa10.35□□□□□ -0.75
HCG18-234ENST00000413358 DPF3Q92784 378 aa10.35□□□□□ -0.75
HCG18-234ENST00000413358 KIFC2Q96AC6 838 aa10.35□□□□□ -0.75
HCG18-234ENST00000413358 RRP36Q96EU6 259 aaKnown RBP10.35□□□□□ -0.75
HCG18-234ENST00000413358 TRIM47Q96LD4 638 aa10.35□□□□□ -0.75
HCG18-234ENST00000413358 SLF1Q9BQI6 1058 aa10.35□□□□□ -0.75
HCG18-234ENST00000413358 CPVLQ9H3G5 476 aa10.35□□□□□ -0.75
HCG18-234ENST00000413358 AGTPBP1Q9UPW5 1226 aa10.35□□□□□ -0.75
HCG18-234ENST00000413358 CTDP1Q9Y5B0 961 aaPredicted RBP10.35□□□□□ -0.75
HCG18-234ENST00000413358 hCG_1642624A0A1W2PR95 340 aa10.34□□□□□ -0.75
HCG18-234ENST00000413358 USP17L15C9J2P7 530 aa10.34□□□□□ -0.75
HCG18-234ENST00000413358 USP17L13C9JLJ4 530 aa10.34□□□□□ -0.75
HCG18-234ENST00000413358 USP17L11C9JVI0 530 aa10.34□□□□□ -0.75
HCG18-234ENST00000413358 USP17L18D6R9N7 530 aa10.34□□□□□ -0.75
HCG18-234ENST00000413358 USP17L22D6RA61 530 aa10.34□□□□□ -0.75
HCG18-234ENST00000413358 USP17L17D6RBQ6 530 aa10.34□□□□□ -0.75
HCG18-234ENST00000413358 USP17L19D6RCP7 530 aa10.34□□□□□ -0.75
HCG18-234ENST00000413358 USP17L20D6RJB6 530 aa10.34□□□□□ -0.75
HCG18-234ENST00000413358 PDHXO00330 501 aa10.34□□□□□ -0.75
HCG18-234ENST00000413358 DTNBO60941 627 aa10.34□□□□□ -0.75
HCG18-234ENST00000413358 PDCP20941 246 aa10.34□□□□□ -0.75
HCG18-234ENST00000413358 FOSBP53539 338 aa10.34□□□□□ -0.75
HCG18-234ENST00000413358 USP17L24Q0WX57 530 aa10.34□□□□□ -0.75
HCG18-234ENST00000413358 TRIM29Q14134 588 aa10.34□□□□□ -0.75
HCG18-234ENST00000413358 NTRK3Q16288 839 aa10.34□□□□□ -0.75
HCG18-234ENST00000413358 CDC37Q16543 378 aaPredicted RBP10.34□□□□□ -0.75
HCG18-234ENST00000413358 ADGRF4Q8IZF3 695 aa10.34□□□□□ -0.75
HCG18-234ENST00000413358 PARK7Q99497 189 aaKnown RBP10.34□□□□□ -0.75
HCG18-234ENST00000413358 HTATIP2Q9BUP3 242 aa10.34□□□□□ -0.75
HCG18-234ENST00000413358 CWC22Q9HCG8 908 aaKnown RBP10.34□□□□□ -0.75
HCG18-234ENST00000413358 VAT1LQ9HCJ6 419 aa10.34□□□□□ -0.75
HCG18-234ENST00000413358 FBXO28Q9NVF7 368 aa10.34□□□□□ -0.75
HCG18-234ENST00000413358 CPA4Q9UI42 421 aa10.34□□□□□ -0.75
HCG18-234ENST00000413358 PNMA3Q9UL41 463 aa10.34□□□□□ -0.75
HCG18-234ENST00000413358 H3BQV1 296 aa10.33□□□□□ -0.76
HCG18-234ENST00000413358 PRPF3O43395 683 aaKnown RBP10.33□□□□□ -0.76
HCG18-234ENST00000413358 CYTH3O43739 400 aa10.33□□□□□ -0.76
HCG18-234ENST00000413358 PLA2G6O60733 806 aa10.33□□□□□ -0.76
HCG18-234ENST00000413358 SCG2P13521 617 aa10.33□□□□□ -0.76
HCG18-234ENST00000413358 XBP1P17861 261 aa10.33□□□□□ -0.76
HCG18-234ENST00000413358 SMARCA1P28370 1054 aa10.33□□□□□ -0.76
HCG18-234ENST00000413358 FCGRTP55899 365 aa10.33□□□□□ -0.76
HCG18-234ENST00000413358 FUT2Q10981 343 aa10.33□□□□□ -0.76
HCG18-234ENST00000413358 TREML2Q5T2D2 321 aa10.33□□□□□ -0.76
HCG18-234ENST00000413358 C17orf99Q6UX52 265 aa10.33□□□□□ -0.76
HCG18-234ENST00000413358 BTNL9Q6UXG8 535 aa10.33□□□□□ -0.76
HCG18-234ENST00000413358 HEATR3Q7Z4Q2 680 aa10.33□□□□□ -0.76
HCG18-234ENST00000413358 PIGSQ96S52 555 aa10.33□□□□□ -0.76
HCG18-234ENST00000413358 ALG1Q9BT22 464 aa10.33□□□□□ -0.76
HCG18-234ENST00000413358 ARHGAP39Q9C0H5 1083 aa10.33□□□□□ -0.76
HCG18-234ENST00000413358 RIOX1Q9H6W3 641 aa10.33□□□□□ -0.76
HCG18-234ENST00000413358 SRRDQ9UH36 339 aa10.33□□□□□ -0.76
HCG18-234ENST00000413358 PPP1R9AQ9ULJ8 1098 aa10.33□□□□□ -0.76
HCG18-234ENST00000413358 PRR12Q9ULL5 1215 aa10.33□□□□□ -0.76
HCG18-234ENST00000413358 V9GY48 417 aaPredicted RBP10.33□□□□□ -0.76
HCG18-234ENST00000413358 MYPNQ86TC9 1320 aa10.33□□□□□ -0.76
HCG18-234ENST00000413358 RBBP6Q7Z6E9 1792 aaKnown RBP10.32□□□□□ -0.76
HCG18-234ENST00000413358 KIAA0100Q14667 2235 aaKnown RBP10.32□□□□□ -0.76
HCG18-234ENST00000413358 VPS37CA5D8V6 355 aaPredicted RBP10.32□□□□□ -0.76
HCG18-234ENST00000413358 hCG_1984214I3L0E3 225 aa10.32□□□□□ -0.76
HCG18-234ENST00000413358 ZBTB5O15062 677 aa10.32□□□□□ -0.76
HCG18-234ENST00000413358 OSBPP22059 807 aa10.32□□□□□ -0.76
HCG18-234ENST00000413358 GRK4P32298 578 aa10.32□□□□□ -0.76
HCG18-234ENST00000413358 PFKFB3Q16875 520 aaPredicted RBP10.32□□□□□ -0.76
HCG18-234ENST00000413358 SLC35G1Q2M3R5 365 aa10.32□□□□□ -0.76
HCG18-234ENST00000413358 QRICH1Q2TAL8 776 aa10.32□□□□□ -0.76
HCG18-234ENST00000413358 CCDC174Q6PII3 467 aa10.32□□□□□ -0.76
HCG18-234ENST00000413358 CATSPERGQ6ZRH7 1159 aa10.32□□□□□ -0.76
HCG18-234ENST00000413358 ZNF713Q8N859 430 aaPredicted RBP10.32□□□□□ -0.76
HCG18-234ENST00000413358 PRPF38AQ8NAV1 312 aaKnown RBP10.32□□□□□ -0.76
HCG18-234ENST00000413358 CCDC148Q8NFR7 591 aa10.32□□□□□ -0.76
HCG18-234ENST00000413358 GPKOWQ92917 476 aaPredicted RBP eCLIP10.32□□□□□ -0.76
HCG18-234ENST00000413358 ATG4CQ96DT6 458 aa10.32□□□□□ -0.76
HCG18-234ENST00000413358 C8orf76Q96K31 380 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms