RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 SSRP1Q08945 709 aaKnown RBP17.63■□□□□ 0.41
LSM5-207ENST00000410044 TAF1CQ15572 869 aaPredicted RBP17.63■□□□□ 0.41
LSM5-207ENST00000410044 PIGSQ96S52 555 aa17.63■□□□□ 0.41
LSM5-207ENST00000410044 MORF4L1Q9UBU8 362 aa17.63■□□□□ 0.41
LSM5-207ENST00000410044 ZNF536O15090 1300 aa17.63■□□□□ 0.41
LSM5-207ENST00000410044 STK36Q9NRP7 1315 aa17.63■□□□□ 0.41
LSM5-207ENST00000410044 FDPSP14324 419 aaKnown RBP17.62■□□□□ 0.41
LSM5-207ENST00000410044 TRAF1Q13077 416 aa17.62■□□□□ 0.41
LSM5-207ENST00000410044 BECN1Q14457 450 aa17.62■□□□□ 0.41
LSM5-207ENST00000410044 TMEM132BQ14DG7 1078 aa17.62■□□□□ 0.41
LSM5-207ENST00000410044 PKN1Q16512 942 aa17.62■□□□□ 0.41
LSM5-207ENST00000410044 CDC37Q16543 378 aaPredicted RBP17.62■□□□□ 0.41
LSM5-207ENST00000410044 QRICH1Q2TAL8 776 aa17.62■□□□□ 0.41
LSM5-207ENST00000410044 C17orf99Q6UX52 265 aa17.62■□□□□ 0.41
LSM5-207ENST00000410044 TRIM22Q8IYM9 498 aa17.62■□□□□ 0.41
LSM5-207ENST00000410044 PHKBQ93100 1093 aa17.62■□□□□ 0.41
LSM5-207ENST00000410044 RNF186Q9NXI6 227 aa17.62■□□□□ 0.41
LSM5-207ENST00000410044 BTBD7Q9P203 1132 aa17.62■□□□□ 0.41
LSM5-207ENST00000410044 ZNF214Q9UL59 606 aaPredicted RBP17.62■□□□□ 0.41
LSM5-207ENST00000410044 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.62■□□□□ 0.41
LSM5-207ENST00000410044 SMCHD1A6NHR9 2005 aa17.62■□□□□ 0.41
LSM5-207ENST00000410044 DEXIO95424 95 aa17.61■□□□□ 0.41
LSM5-207ENST00000410044 ICAM1P05362 532 aa17.61■□□□□ 0.41
LSM5-207ENST00000410044 BCRP11274 1271 aa17.61■□□□□ 0.41
LSM5-207ENST00000410044 HMGN5P82970 282 aaKnown RBP17.61■□□□□ 0.41
LSM5-207ENST00000410044 MAP2K1Q02750 393 aaPredicted RBP17.61■□□□□ 0.41
LSM5-207ENST00000410044 PFKFB3Q16875 520 aaPredicted RBP17.61■□□□□ 0.41
LSM5-207ENST00000410044 SMCR8Q8TEV9 937 aaPredicted RBP17.61■□□□□ 0.41
LSM5-207ENST00000410044 SLC26A6Q9BXS9 759 aa17.61■□□□□ 0.41
LSM5-207ENST00000410044 hCG_1984214I3L0E3 225 aa17.6■□□□□ 0.41
LSM5-207ENST00000410044 SNAP25P60880 206 aa17.6■□□□□ 0.41
LSM5-207ENST00000410044 AKAP17AQ02040 695 aaKnown RBP17.6■□□□□ 0.41
LSM5-207ENST00000410044 CRHR2Q13324 411 aa17.6■□□□□ 0.41
LSM5-207ENST00000410044 FAM110CQ1W6H9 321 aa17.6■□□□□ 0.41
LSM5-207ENST00000410044 Q3C1V9 767 aa17.6■□□□□ 0.41
LSM5-207ENST00000410044 FBXO11Q86XK2 927 aa17.6■□□□□ 0.41
LSM5-207ENST00000410044 RIOX2Q8IUF8 465 aa17.6■□□□□ 0.41
LSM5-207ENST00000410044 FAM177A1Q8N128 213 aaPredicted RBP17.6■□□□□ 0.41
LSM5-207ENST00000410044 ZNF713Q8N859 430 aaPredicted RBP17.6■□□□□ 0.41
LSM5-207ENST00000410044 AMNQ9BXJ7 453 aa17.6■□□□□ 0.41
LSM5-207ENST00000410044 MAF1Q9H063 256 aa17.6■□□□□ 0.41
LSM5-207ENST00000410044 TXNRD2Q9NNW7 524 aa17.6■□□□□ 0.41
LSM5-207ENST00000410044 SAGE1Q9NXZ1 904 aa17.6■□□□□ 0.41
LSM5-207ENST00000410044 ORC3Q9UBD5 711 aaPredicted RBP17.6■□□□□ 0.41
LSM5-207ENST00000410044 SEC63Q9UGP8 760 aaKnown RBP17.6■□□□□ 0.41
LSM5-207ENST00000410044 PTPDC1A2A3K4 754 aa17.59■□□□□ 0.41
LSM5-207ENST00000410044 JAK2O60674 1132 aa17.59■□□□□ 0.41
LSM5-207ENST00000410044 PPP1R11O60927 126 aaPredicted RBP17.59■□□□□ 0.41
LSM5-207ENST00000410044 SCG2P13521 617 aa17.59■□□□□ 0.41
LSM5-207ENST00000410044 STAT3P40763 770 aa17.59■□□□□ 0.41
LSM5-207ENST00000410044 ERVK-9P63128 1117 aa17.59■□□□□ 0.41
LSM5-207ENST00000410044 ERVK-24P63145 666 aa17.59■□□□□ 0.41
LSM5-207ENST00000410044 TKFCQ3LXA3 575 aa17.59■□□□□ 0.41
LSM5-207ENST00000410044 SAMD1Q6SPF0 538 aaPredicted RBP17.59■□□□□ 0.41
LSM5-207ENST00000410044 HOMER1Q86YM7 354 aa17.59■□□□□ 0.41
LSM5-207ENST00000410044 GPRC5AQ8NFJ5 357 aa17.59■□□□□ 0.41
LSM5-207ENST00000410044 TEX13BQ9BXU2 312 aa17.59■□□□□ 0.41
LSM5-207ENST00000410044 SPATC1LQ9H0A9 340 aa17.59■□□□□ 0.41
LSM5-207ENST00000410044 RAVER2Q9HCJ3 691 aaKnown RBP17.59■□□□□ 0.41
LSM5-207ENST00000410044 CTDP1Q9Y5B0 961 aaPredicted RBP17.59■□□□□ 0.41
LSM5-207ENST00000410044 SLC25A27O95847 323 aa17.58■□□□□ 0.4
LSM5-207ENST00000410044 COPB2P35606 906 aa17.58■□□□□ 0.4
LSM5-207ENST00000410044 ANP32AP39687 249 aaKnown RBP17.58■□□□□ 0.4
LSM5-207ENST00000410044 NOM1Q5C9Z4 860 aaKnown RBP17.58■□□□□ 0.4
LSM5-207ENST00000410044 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.58■□□□□ 0.4
LSM5-207ENST00000410044 CPXCR1Q8N123 301 aa17.58■□□□□ 0.4
LSM5-207ENST00000410044 ANKRD13CQ8N6S4 541 aa17.58■□□□□ 0.4
LSM5-207ENST00000410044 JMYQ8N9B5 988 aa17.58■□□□□ 0.4
LSM5-207ENST00000410044 RGS22Q8NE09 1264 aa17.58■□□□□ 0.4
LSM5-207ENST00000410044 SHCBP1Q8NEM2 672 aa17.58■□□□□ 0.4
LSM5-207ENST00000410044 WASF1Q92558 559 aa17.58■□□□□ 0.4
LSM5-207ENST00000410044 AGBL1Q96MI9 1066 aa17.58■□□□□ 0.4
LSM5-207ENST00000410044 SH3GLB2Q9NR46 395 aa17.58■□□□□ 0.4
LSM5-207ENST00000410044 ABCB11O95342 1321 aa17.57■□□□□ 0.4
LSM5-207ENST00000410044 hCG_1642624A0A1W2PR95 340 aa17.57■□□□□ 0.4
LSM5-207ENST00000410044 TRPA1O75762 1119 aa17.57■□□□□ 0.4
LSM5-207ENST00000410044 CCNA1P78396 465 aa17.57■□□□□ 0.4
LSM5-207ENST00000410044 CCDC174Q6PII3 467 aa17.57■□□□□ 0.4
LSM5-207ENST00000410044 TEX2Q8IWB9 1127 aa17.57■□□□□ 0.4
LSM5-207ENST00000410044 PAGR1Q9BTK6 254 aa17.57■□□□□ 0.4
LSM5-207ENST00000410044 MOV10L1Q9BXT6 1211 aaKnown RBP17.57■□□□□ 0.4
LSM5-207ENST00000410044 R3HDMLQ9H3Y0 253 aa17.57■□□□□ 0.4
LSM5-207ENST00000410044 WBP1LQ9NX94 342 aa17.57■□□□□ 0.4
LSM5-207ENST00000410044 BARHL2Q9NY43 387 aa17.57■□□□□ 0.4
LSM5-207ENST00000410044 CCPG1Q9ULG6 757 aa17.57■□□□□ 0.4
LSM5-207ENST00000410044 RIPK3Q9Y572 518 aa17.57■□□□□ 0.4
LSM5-207ENST00000410044 PCDHA1Q9Y5I3 950 aa17.57■□□□□ 0.4
LSM5-207ENST00000410044 PEX10O60683 326 aa17.56■□□□□ 0.4
LSM5-207ENST00000410044 PPFIA3O75145 1194 aa17.56■□□□□ 0.4
LSM5-207ENST00000410044 WWC2Q6AWC2 1192 aa17.56■□□□□ 0.4
LSM5-207ENST00000410044 SNRNP48Q6IEG0 339 aaKnown RBP17.56■□□□□ 0.4
LSM5-207ENST00000410044 SAMD3Q8N6K7 520 aa17.56■□□□□ 0.4
LSM5-207ENST00000410044 CHST13Q8NET6 341 aa17.56■□□□□ 0.4
LSM5-207ENST00000410044 PIBF1Q8WXW3 757 aa17.56■□□□□ 0.4
LSM5-207ENST00000410044 COA7Q96BR5 231 aa17.56■□□□□ 0.4
LSM5-207ENST00000410044 DDX11Q96FC9 970 aa17.56■□□□□ 0.4
LSM5-207ENST00000410044 CPA4Q9UI42 421 aa17.56■□□□□ 0.4
LSM5-207ENST00000410044 SMC3Q9UQE7 1217 aa17.56■□□□□ 0.4
LSM5-207ENST00000410044 MRPL11Q9Y3B7 192 aaKnown RBP17.56■□□□□ 0.4
LSM5-207ENST00000410044 STXBP3O00186 592 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms