RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 FMR1NBQ8N0W7 255 aaPredicted RBP6.32□□□□□ -1.4
EPHA4-202ENST00000409854 PIAS4Q8N2W9 510 aaPredicted RBP6.32□□□□□ -1.4
EPHA4-202ENST00000409854 ACER1Q8TDN7 264 aa6.32□□□□□ -1.4
EPHA4-202ENST00000409854 VCPKMTQ9H867 229 aa6.32□□□□□ -1.4
EPHA4-202ENST00000409854 C6orf50Q9HD87 102 aa6.32□□□□□ -1.4
EPHA4-202ENST00000409854 DACT1Q9NYF0 836 aa6.32□□□□□ -1.4
EPHA4-202ENST00000409854 GGA3Q9NZ52 723 aa6.32□□□□□ -1.4
EPHA4-202ENST00000409854 GOLGA6L3A6NEY3 463 aa6.31□□□□□ -1.4
EPHA4-202ENST00000409854 TRIM75PA6NK02 468 aa6.31□□□□□ -1.4
EPHA4-202ENST00000409854 WNT7AO00755 349 aa6.31□□□□□ -1.4
EPHA4-202ENST00000409854 CLK2P49760 499 aaKnown RBP6.31□□□□□ -1.4
EPHA4-202ENST00000409854 TTC38Q5R3I4 469 aa6.31□□□□□ -1.4
EPHA4-202ENST00000409854 NBPF12Q5TAG4 269 aaPredicted RBP6.31□□□□□ -1.4
EPHA4-202ENST00000409854 RESP18Q5W5W9 173 aa6.31□□□□□ -1.4
EPHA4-202ENST00000409854 DCAF15Q66K64 600 aa6.31□□□□□ -1.4
EPHA4-202ENST00000409854 ZNF579Q8NAF0 562 aaKnown RBP6.31□□□□□ -1.4
EPHA4-202ENST00000409854 ZNF341Q9BYN7 854 aa6.31□□□□□ -1.4
EPHA4-202ENST00000409854 SCAF8Q9UPN6 1271 aaKnown RBP6.31□□□□□ -1.4
EPHA4-202ENST00000409854 SMCO2A6NFE2 343 aa6.31□□□□□ -1.4
EPHA4-202ENST00000409854 SLC16A2P36021 539 aa6.31□□□□□ -1.4
EPHA4-202ENST00000409854 ATP2C1P98194 919 aaPredicted RBP6.31□□□□□ -1.4
EPHA4-202ENST00000409854 SYDE2Q5VT97 1194 aa6.31□□□□□ -1.4
EPHA4-202ENST00000409854 SHC4Q6S5L8 630 aa6.31□□□□□ -1.4
EPHA4-202ENST00000409854 PIK3AP1Q6ZUJ8 805 aa6.31□□□□□ -1.4
EPHA4-202ENST00000409854 KRT25Q7Z3Z0 450 aa6.31□□□□□ -1.4
EPHA4-202ENST00000409854 TEX2Q8IWB9 1127 aa6.31□□□□□ -1.4
EPHA4-202ENST00000409854 KRI1Q8N9T8 703 aaKnown RBP6.31□□□□□ -1.4
EPHA4-202ENST00000409854 FSIP1Q8NA03 581 aa6.31□□□□□ -1.4
EPHA4-202ENST00000409854 NUP62CLQ9H1M0 184 aa6.31□□□□□ -1.4
EPHA4-202ENST00000409854 VAT1LQ9HCJ6 419 aa6.31□□□□□ -1.4
EPHA4-202ENST00000409854 RIC8AQ9NPQ8 531 aa6.31□□□□□ -1.4
EPHA4-202ENST00000409854 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.31□□□□□ -1.4
EPHA4-202ENST00000409854 SRPRBQ9Y5M8 271 aaKnown RBP6.31□□□□□ -1.4
EPHA4-202ENST00000409854 MARCKSP29966 332 aaPredicted RBP6.31□□□□□ -1.4
EPHA4-202ENST00000409854 ORC2Q13416 577 aaPredicted RBP6.31□□□□□ -1.4
EPHA4-202ENST00000409854 CDC37Q16543 378 aaPredicted RBP6.31□□□□□ -1.4
EPHA4-202ENST00000409854 QRICH1Q2TAL8 776 aa6.31□□□□□ -1.4
EPHA4-202ENST00000409854 NOL9Q5SY16 702 aaKnown RBP6.31□□□□□ -1.4
EPHA4-202ENST00000409854 CCDC73Q6ZRK6 1079 aa6.31□□□□□ -1.4
EPHA4-202ENST00000409854 NUP88Q99567 741 aaPredicted RBP6.31□□□□□ -1.4
EPHA4-202ENST00000409854 KIAA1683Q9H0B3 1180 aa6.31□□□□□ -1.4
EPHA4-202ENST00000409854 CHRM1P11229 460 aaPredicted RBP6.3□□□□□ -1.4
EPHA4-202ENST00000409854 PFKFB1P16118 471 aa6.3□□□□□ -1.4
EPHA4-202ENST00000409854 LMOD1P29536 600 aaPredicted RBP6.3□□□□□ -1.4
EPHA4-202ENST00000409854 ADCY7P51828 1080 aa6.3□□□□□ -1.4
EPHA4-202ENST00000409854 NDUFA8P51970 172 aa6.3□□□□□ -1.4
EPHA4-202ENST00000409854 L1TD1Q5T7N2 865 aaKnown RBP6.3□□□□□ -1.4
EPHA4-202ENST00000409854 SCYL3Q8IZE3 742 aa6.3□□□□□ -1.4
EPHA4-202ENST00000409854 C4orf32Q8N8J7 132 aa6.3□□□□□ -1.4
EPHA4-202ENST00000409854 FERMT2Q96AC1 680 aa6.3□□□□□ -1.4
EPHA4-202ENST00000409854 COA7Q96BR5 231 aa6.3□□□□□ -1.4
EPHA4-202ENST00000409854 TIGD1Q96MW7 591 aa6.3□□□□□ -1.4
EPHA4-202ENST00000409854 WDR18Q9BV38 432 aa6.3□□□□□ -1.4
EPHA4-202ENST00000409854 GLIS2Q9BZE0 524 aaPredicted RBP6.3□□□□□ -1.4
EPHA4-202ENST00000409854 CCDC194A0A1B0GVG4 234 aa6.3□□□□□ -1.4
EPHA4-202ENST00000409854 TMEM232C9JQI7 657 aa6.3□□□□□ -1.4
EPHA4-202ENST00000409854 CTAGE5O15320 804 aa6.3□□□□□ -1.4
EPHA4-202ENST00000409854 MRE11P49959 708 aa6.3□□□□□ -1.4
EPHA4-202ENST00000409854 STAT2P52630 851 aa6.3□□□□□ -1.4
EPHA4-202ENST00000409854 MAP3K11Q16584 847 aa6.3□□□□□ -1.4
EPHA4-202ENST00000409854 REXO1Q8N1G1 1221 aaKnown RBP6.3□□□□□ -1.4
EPHA4-202ENST00000409854 RASGRP4Q8TDF6 673 aa6.3□□□□□ -1.4
EPHA4-202ENST00000409854 LPAR1Q92633 364 aa6.3□□□□□ -1.4
EPHA4-202ENST00000409854 GLT8D2Q9H1C3 349 aa6.3□□□□□ -1.4
EPHA4-202ENST00000409854 RANBP17Q9H2T7 1088 aaKnown RBP6.3□□□□□ -1.4
EPHA4-202ENST00000409854 GRPEL1Q9HAV7 217 aa6.3□□□□□ -1.4
EPHA4-202ENST00000409854 PRR12Q9ULL5 1215 aa6.3□□□□□ -1.4
EPHA4-202ENST00000409854 A0A1B0GVL5 298 aa6.3□□□□□ -1.4
EPHA4-202ENST00000409854 INPP5BP32019 993 aa6.3□□□□□ -1.4
EPHA4-202ENST00000409854 NONOQ15233 471 aaKnown RBP eCLIP6.3□□□□□ -1.4
EPHA4-202ENST00000409854 FAM83BQ5T0W9 1011 aa6.3□□□□□ -1.4
EPHA4-202ENST00000409854 ARL6IP4Q66PJ3 421 aaKnown RBP6.3□□□□□ -1.4
EPHA4-202ENST00000409854 USP50Q70EL3 339 aaPredicted RBP6.3□□□□□ -1.4
EPHA4-202ENST00000409854 FAM160B2Q86V87 743 aa6.3□□□□□ -1.4
EPHA4-202ENST00000409854 ELOA2Q8IYF1 753 aaPredicted RBP6.3□□□□□ -1.4
EPHA4-202ENST00000409854 KLRG1Q96E93 195 aa6.3□□□□□ -1.4
EPHA4-202ENST00000409854 CLIC6Q96NY7 704 aa6.3□□□□□ -1.4
EPHA4-202ENST00000409854 TNMDQ9H2S6 317 aa6.3□□□□□ -1.4
EPHA4-202ENST00000409854 FEM1BQ9UK73 627 aa6.3□□□□□ -1.4
EPHA4-202ENST00000409854 LAD1O00515 517 aa6.29□□□□□ -1.4
EPHA4-202ENST00000409854 WDR46O15213 610 aaKnown RBP6.29□□□□□ -1.4
EPHA4-202ENST00000409854 GRIN3BO60391 1043 aa6.29□□□□□ -1.4
EPHA4-202ENST00000409854 GRIN1Q05586 938 aa6.29□□□□□ -1.4
EPHA4-202ENST00000409854 TPRNQ4KMQ1 711 aa6.29□□□□□ -1.4
EPHA4-202ENST00000409854 CUL5Q93034 780 aa6.29□□□□□ -1.4
EPHA4-202ENST00000409854 AMNQ9BXJ7 453 aa6.29□□□□□ -1.4
EPHA4-202ENST00000409854 TSPY26PQ9H489 355 aa6.29□□□□□ -1.4
EPHA4-202ENST00000409854 MRVI1Q9Y6F6 885 aa6.29□□□□□ -1.4
EPHA4-202ENST00000409854 LCTP09848 1927 aa6.29□□□□□ -1.4
EPHA4-202ENST00000409854 GLTPD2A6NH11 291 aa6.29□□□□□ -1.4
EPHA4-202ENST00000409854 EDIL3O43854 480 aa6.29□□□□□ -1.4
EPHA4-202ENST00000409854 KINO60870 393 aaKnown RBP6.29□□□□□ -1.4
EPHA4-202ENST00000409854 PRPHP41219 470 aa6.29□□□□□ -1.4
EPHA4-202ENST00000409854 PTGDRQ13258 359 aa6.29□□□□□ -1.4
EPHA4-202ENST00000409854 ZNF174Q15697 407 aa6.29□□□□□ -1.4
EPHA4-202ENST00000409854 INF2Q27J81 1249 aa6.29□□□□□ -1.4
EPHA4-202ENST00000409854 SUPT20HL1Q3ZLR7 823 aa6.29□□□□□ -1.4
EPHA4-202ENST00000409854 SPICE1Q8N0Z3 855 aa6.29□□□□□ -1.4
EPHA4-202ENST00000409854 FAM43AQ8N2R8 423 aa6.29□□□□□ -1.4
EPHA4-202ENST00000409854 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms