RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 IQCEQ6IPM2 695 aa17.31■□□□□ 0.36
LIMS2-205ENST00000409455 SH3RF1Q7Z6J0 888 aa17.31■□□□□ 0.36
LIMS2-205ENST00000409455 TEX2Q8IWB9 1127 aa17.31■□□□□ 0.36
LIMS2-205ENST00000409455 ANKRD2Q9GZV1 360 aa17.31■□□□□ 0.36
LIMS2-205ENST00000409455 CASZ1Q86V15 1759 aa17.31■□□□□ 0.36
LIMS2-205ENST00000409455 A0A087X0B3 334 aa17.3■□□□□ 0.36
LIMS2-205ENST00000409455 RNF225M0QZC1 329 aaPredicted RBP17.3■□□□□ 0.36
LIMS2-205ENST00000409455 DEXIO95424 95 aa17.3■□□□□ 0.36
LIMS2-205ENST00000409455 COPB1P53618 953 aaKnown RBP17.3■□□□□ 0.36
LIMS2-205ENST00000409455 GRAPQ13588 217 aa17.3■□□□□ 0.36
LIMS2-205ENST00000409455 CCDC122Q5T0U0 273 aa17.3■□□□□ 0.36
LIMS2-205ENST00000409455 CCDC70Q6NSX1 233 aa17.3■□□□□ 0.36
LIMS2-205ENST00000409455 GBP6Q6ZN66 633 aa17.3■□□□□ 0.36
LIMS2-205ENST00000409455 MAGEB6Q8N7X4 407 aa17.3■□□□□ 0.36
LIMS2-205ENST00000409455 GRAPLQ8TC17 118 aaPredicted RBP17.3■□□□□ 0.36
LIMS2-205ENST00000409455 BCAS4Q8TDM0 211 aa17.3■□□□□ 0.36
LIMS2-205ENST00000409455 EPSTI1Q96J88 318 aa17.3■□□□□ 0.36
LIMS2-205ENST00000409455 CAPS2Q9BXY5 557 aa17.3■□□□□ 0.36
LIMS2-205ENST00000409455 CABP5Q9NP86 173 aa17.3■□□□□ 0.36
LIMS2-205ENST00000409455 TNRC6CQ9HCJ0 1690 aaKnown RBP17.3■□□□□ 0.36
LIMS2-205ENST00000409455 AGPSO00116 658 aa17.3■□□□□ 0.36
LIMS2-205ENST00000409455 ZMYND10O75800 440 aa17.3■□□□□ 0.36
LIMS2-205ENST00000409455 RTN1Q16799 776 aa17.3■□□□□ 0.36
LIMS2-205ENST00000409455 JAKMIP2Q96AA8 810 aa17.3■□□□□ 0.36
LIMS2-205ENST00000409455 CHP1Q99653 195 aa17.3■□□□□ 0.36
LIMS2-205ENST00000409455 GNL3LQ9NVN8 582 aaKnown RBP17.3■□□□□ 0.36
LIMS2-205ENST00000409455 TAB2Q9NYJ8 693 aa17.3■□□□□ 0.36
LIMS2-205ENST00000409455 REXO2Q9Y3B8 237 aaKnown RBP17.3■□□□□ 0.36
LIMS2-205ENST00000409455 TRIM75PA6NK02 468 aa17.29■□□□□ 0.36
LIMS2-205ENST00000409455 SRGAP2O75044 1071 aa17.29■□□□□ 0.36
LIMS2-205ENST00000409455 MNAT1P51948 309 aa17.29■□□□□ 0.36
LIMS2-205ENST00000409455 PAXIP1Q6ZW49 1069 aaPredicted RBP17.29■□□□□ 0.36
LIMS2-205ENST00000409455 GSPT2Q8IYD1 628 aaKnown RBP17.29■□□□□ 0.36
LIMS2-205ENST00000409455 KAT2BQ92831 832 aa17.29■□□□□ 0.36
LIMS2-205ENST00000409455 TSR1Q2NL82 804 aaKnown RBP17.29■□□□□ 0.36
LIMS2-205ENST00000409455 CRY2Q49AN0 593 aa17.29■□□□□ 0.36
LIMS2-205ENST00000409455 CCNI2Q6ZMN8 369 aaPredicted RBP17.29■□□□□ 0.36
LIMS2-205ENST00000409455 FBXO33Q7Z6M2 555 aa17.29■□□□□ 0.36
LIMS2-205ENST00000409455 SYMPKQ92797 1274 aaKnown RBP17.29■□□□□ 0.36
LIMS2-205ENST00000409455 RPGRQ92834 1020 aaKnown RBP17.29■□□□□ 0.36
LIMS2-205ENST00000409455 LRP2BPQ9P2M1 347 aa17.29■□□□□ 0.36
LIMS2-205ENST00000409455 RWDD2AQ9UIY3 292 aa17.29■□□□□ 0.36
LIMS2-205ENST00000409455 NID2Q14112 1375 aa17.29■□□□□ 0.36
LIMS2-205ENST00000409455 KCNJ18B7U540 433 aa17.28■□□□□ 0.36
LIMS2-205ENST00000409455 EIF3HO15372 352 aaKnown RBP eCLIP17.28■□□□□ 0.36
LIMS2-205ENST00000409455 UBXN1Q04323 297 aa17.28■□□□□ 0.36
LIMS2-205ENST00000409455 KCNJ12Q14500 433 aa17.28■□□□□ 0.36
LIMS2-205ENST00000409455 TCP11X2Q5H9J9 407 aa17.28■□□□□ 0.36
LIMS2-205ENST00000409455 CCDC82Q8N4S0 544 aa17.28■□□□□ 0.36
LIMS2-205ENST00000409455 OR8K1Q8NGG5 319 aa17.28■□□□□ 0.36
LIMS2-205ENST00000409455 ZSWIM5Q9P217 1185 aa17.28■□□□□ 0.36
LIMS2-205ENST00000409455 FAM184BQ9ULE4 1060 aa17.28■□□□□ 0.36
LIMS2-205ENST00000409455 CCDC196A0A1B0GTZ2 297 aa17.28■□□□□ 0.36
LIMS2-205ENST00000409455 KRT86O43790 486 aa17.28■□□□□ 0.36
LIMS2-205ENST00000409455 MYBL2P10244 700 aa17.28■□□□□ 0.36
LIMS2-205ENST00000409455 INPP5BP32019 993 aa17.28■□□□□ 0.36
LIMS2-205ENST00000409455 KRT83P78385 493 aa17.28■□□□□ 0.36
LIMS2-205ENST00000409455 PAK1Q13153 545 aa17.28■□□□□ 0.36
LIMS2-205ENST00000409455 RRAGBQ5VZM2 374 aa17.28■□□□□ 0.36
LIMS2-205ENST00000409455 TXNRD3Q86VQ6 643 aa17.28■□□□□ 0.36
LIMS2-205ENST00000409455 OXER1Q8TDS5 423 aa17.28■□□□□ 0.36
LIMS2-205ENST00000409455 ANKIB1Q9P2G1 1089 aa17.28■□□□□ 0.36
LIMS2-205ENST00000409455 ABCF2Q9UG63 623 aa17.28■□□□□ 0.36
LIMS2-205ENST00000409455 COBLO75128 1261 aa17.27■□□□□ 0.36
LIMS2-205ENST00000409455 KIAA1328Q86T90 577 aa17.27■□□□□ 0.36
LIMS2-205ENST00000409455 NLGN1Q8N2Q7 840 aa17.27■□□□□ 0.36
LIMS2-205ENST00000409455 FERMT2Q96AC1 680 aa17.27■□□□□ 0.36
LIMS2-205ENST00000409455 CNNM2Q9H8M5 875 aa17.27■□□□□ 0.36
LIMS2-205ENST00000409455 GOLGA8KD6RF30 607 aa17.27■□□□□ 0.36
LIMS2-205ENST00000409455 HNRNPH1P31943 449 aaKnown RBP17.27■□□□□ 0.36
LIMS2-205ENST00000409455 GNGT1P63211 74 aa17.27■□□□□ 0.36
LIMS2-205ENST00000409455 AIDAQ96BJ3 306 aa17.27■□□□□ 0.36
LIMS2-205ENST00000409455 STRBPQ96SI9 672 aaKnown RBP17.27■□□□□ 0.36
LIMS2-205ENST00000409455 LUC7L2Q9Y383 392 aaKnown RBP17.27■□□□□ 0.36
LIMS2-205ENST00000409455 HIBADHP31937 336 aaKnown RBP17.26■□□□□ 0.35
LIMS2-205ENST00000409455 CRACR2BQ8N4Y2 399 aaPredicted RBP17.26■□□□□ 0.35
LIMS2-205ENST00000409455 ANO9A1A5B4 782 aa17.26■□□□□ 0.35
LIMS2-205ENST00000409455 IPO7O95373 1038 aaKnown RBP17.26■□□□□ 0.35
LIMS2-205ENST00000409455 BMP15O95972 392 aa17.26■□□□□ 0.35
LIMS2-205ENST00000409455 GSCP56915 257 aaPredicted RBP17.26■□□□□ 0.35
LIMS2-205ENST00000409455 SETQ01105 290 aaPredicted RBP17.26■□□□□ 0.35
LIMS2-205ENST00000409455 FBXW10Q5XX13 1052 aa17.26■□□□□ 0.35
LIMS2-205ENST00000409455 AMOTL1Q8IY63 956 aa17.26■□□□□ 0.35
LIMS2-205ENST00000409455 INCENPQ9NQS7 918 aa17.26■□□□□ 0.35
LIMS2-205ENST00000409455 TTC26A0AVF1 554 aa17.25■□□□□ 0.35
LIMS2-205ENST00000409455 GRIN2DO15399 1336 aa17.25■□□□□ 0.35
LIMS2-205ENST00000409455 OPA1O60313 960 aa17.25■□□□□ 0.35
LIMS2-205ENST00000409455 XBP1P17861 261 aa17.25■□□□□ 0.35
LIMS2-205ENST00000409455 MAP2K2P36507 400 aa17.25■□□□□ 0.35
LIMS2-205ENST00000409455 HERVK_113P62684 666 aa17.25■□□□□ 0.35
LIMS2-205ENST00000409455 AENQ8WTP8 325 aaKnown RBP17.25■□□□□ 0.35
LIMS2-205ENST00000409455 DNAJC7Q99615 494 aa17.25■□□□□ 0.35
LIMS2-205ENST00000409455 KRT23Q9C075 422 aa17.25■□□□□ 0.35
LIMS2-205ENST00000409455 COL1A1P02452 1464 aaPredicted RBP17.25■□□□□ 0.35
LIMS2-205ENST00000409455 ERICH2A1L162 156 aa17.25■□□□□ 0.35
LIMS2-205ENST00000409455 A6NNZ2 444 aa17.25■□□□□ 0.35
LIMS2-205ENST00000409455 WTAPQ15007 396 aa17.25■□□□□ 0.35
LIMS2-205ENST00000409455 TUBB8Q3ZCM7 444 aa17.25■□□□□ 0.35
LIMS2-205ENST00000409455 ZNF662Q6ZS27 426 aa17.25■□□□□ 0.35
LIMS2-205ENST00000409455 NELFBQ8WX92 580 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms