RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 hCG_1984214I3L0E3 225 aa23.68■■□□□ 1.38
VSX1-203ENST00000409285 ATP2A1O14983 1001 aa23.68■■□□□ 1.38
VSX1-203ENST00000409285 AKAP17AQ02040 695 aaKnown RBP23.68■■□□□ 1.38
VSX1-203ENST00000409285 PKN1Q16512 942 aa23.68■■□□□ 1.38
VSX1-203ENST00000409285 PFKFB3Q16875 520 aaPredicted RBP23.68■■□□□ 1.38
VSX1-203ENST00000409285 FAM177A1Q8N128 213 aaPredicted RBP23.68■■□□□ 1.38
VSX1-203ENST00000409285 ZNF713Q8N859 430 aaPredicted RBP23.68■■□□□ 1.38
VSX1-203ENST00000409285 REPS2Q8NFH8 660 aa23.68■■□□□ 1.38
VSX1-203ENST00000409285 ATG4CQ96DT6 458 aa23.68■■□□□ 1.38
VSX1-203ENST00000409285 ZIC5Q96T25 663 aa23.68■■□□□ 1.38
VSX1-203ENST00000409285 PARK7Q99497 189 aaKnown RBP23.68■■□□□ 1.38
VSX1-203ENST00000409285 ORC3Q9UBD5 711 aaPredicted RBP23.68■■□□□ 1.38
VSX1-203ENST00000409285 SMC3Q9UQE7 1217 aa23.68■■□□□ 1.38
VSX1-203ENST00000409285 KIF3AQ9Y496 699 aa23.68■■□□□ 1.38
VSX1-203ENST00000409285 V9GY48 417 aaPredicted RBP23.68■■□□□ 1.38
VSX1-203ENST00000409285 MGAMO43451 1857 aa23.68■■□□□ 1.38
VSX1-203ENST00000409285 HSP90AA1P07900 732 aaKnown RBP23.68■■□□□ 1.38
VSX1-203ENST00000409285 QRICH1Q2TAL8 776 aa23.68■■□□□ 1.38
VSX1-203ENST00000409285 WASF1Q92558 559 aa23.68■■□□□ 1.38
VSX1-203ENST00000409285 P2RX7Q99572 595 aaKnown RBP23.68■■□□□ 1.38
VSX1-203ENST00000409285 SCG2P13521 617 aa23.67■■□□□ 1.38
VSX1-203ENST00000409285 TRAF1Q13077 416 aa23.67■■□□□ 1.38
VSX1-203ENST00000409285 RGS22Q8NE09 1264 aa23.67■■□□□ 1.38
VSX1-203ENST00000409285 VAT1LQ9HCJ6 419 aa23.67■■□□□ 1.38
VSX1-203ENST00000409285 ZNF536O15090 1300 aa23.66■■□□□ 1.38
VSX1-203ENST00000409285 ZBED4O75132 1171 aa23.66■■□□□ 1.38
VSX1-203ENST00000409285 ALDH1A1P00352 501 aa23.66■■□□□ 1.38
VSX1-203ENST00000409285 ICAM1P05362 532 aa23.66■■□□□ 1.38
VSX1-203ENST00000409285 GJB2P29033 226 aa23.66■■□□□ 1.38
VSX1-203ENST00000409285 GCLCP48506 637 aaPredicted RBP23.66■■□□□ 1.38
VSX1-203ENST00000409285 HOMER1Q86YM7 354 aa23.66■■□□□ 1.38
VSX1-203ENST00000409285 ZNF214Q9UL59 606 aaPredicted RBP23.66■■□□□ 1.38
VSX1-203ENST00000409285 ZNFX1Q9P2E3 1918 aaKnown RBP23.66■■□□□ 1.38
VSX1-203ENST00000409285 ADGRA2Q96PE1 1338 aa23.66■■□□□ 1.38
VSX1-203ENST00000409285 POTEEQ6S8J3 1075 aa23.65■■□□□ 1.38
VSX1-203ENST00000409285 DDX11Q96FC9 970 aa23.65■■□□□ 1.38
VSX1-203ENST00000409285 IPO9Q96P70 1041 aaKnown RBP23.65■■□□□ 1.38
VSX1-203ENST00000409285 AMNQ9BXJ7 453 aa23.65■■□□□ 1.38
VSX1-203ENST00000409285 RABGAP1Q9Y3P9 1069 aa23.65■■□□□ 1.38
VSX1-203ENST00000409285 PLXNB2O15031 1838 aa23.65■■□□□ 1.38
VSX1-203ENST00000409285 MYH15Q9Y2K3 1946 aa23.65■■□□□ 1.38
VSX1-203ENST00000409285 PPP1R11O60927 126 aaPredicted RBP23.64■■□□□ 1.38
VSX1-203ENST00000409285 PPFIA3O75145 1194 aa23.64■■□□□ 1.38
VSX1-203ENST00000409285 CYP2C8P10632 490 aa23.64■■□□□ 1.38
VSX1-203ENST00000409285 MAP2K1Q02750 393 aaPredicted RBP23.64■■□□□ 1.38
VSX1-203ENST00000409285 PPP1R18Q6NYC8 613 aa23.64■■□□□ 1.38
VSX1-203ENST00000409285 SMCR8Q8TEV9 937 aaPredicted RBP23.64■■□□□ 1.38
VSX1-203ENST00000409285 SH3GLB2Q9NR46 395 aa23.64■■□□□ 1.38
VSX1-203ENST00000409285 BARHL2Q9NY43 387 aa23.64■■□□□ 1.38
VSX1-203ENST00000409285 hCG_1642624A0A1W2PR95 340 aa23.63■■□□□ 1.37
VSX1-203ENST00000409285 TMEM132BQ14DG7 1078 aa23.63■■□□□ 1.37
VSX1-203ENST00000409285 FBXO11Q86XK2 927 aa23.63■■□□□ 1.37
VSX1-203ENST00000409285 FAM184AQ8NB25 1140 aa23.63■■□□□ 1.37
VSX1-203ENST00000409285 TEX13BQ9BXU2 312 aa23.63■■□□□ 1.37
VSX1-203ENST00000409285 CWC22Q9HCG8 908 aaKnown RBP23.63■■□□□ 1.37
VSX1-203ENST00000409285 WWC2Q6AWC2 1192 aa23.62■■□□□ 1.37
VSX1-203ENST00000409285 TEX2Q8IWB9 1127 aa23.62■■□□□ 1.37
VSX1-203ENST00000409285 CFHR5Q9BXR6 569 aa23.62■■□□□ 1.37
VSX1-203ENST00000409285 MORF4L1Q9UBU8 362 aa23.62■■□□□ 1.37
VSX1-203ENST00000409285 DAXXQ9UER7 740 aaPredicted RBP23.62■■□□□ 1.37
VSX1-203ENST00000409285 LCTP09848 1927 aa23.62■■□□□ 1.37
VSX1-203ENST00000409285 ZNF236Q9UL36 1845 aa23.62■■□□□ 1.37
VSX1-203ENST00000409285 CNMDO75829 334 aa23.62■■□□□ 1.37
VSX1-203ENST00000409285 PDCP20941 246 aa23.62■■□□□ 1.37
VSX1-203ENST00000409285 TAF1CQ15572 869 aaPredicted RBP23.62■■□□□ 1.37
VSX1-203ENST00000409285 SAMD1Q6SPF0 538 aaPredicted RBP23.62■■□□□ 1.37
VSX1-203ENST00000409285 PIBF1Q8WXW3 757 aa23.62■■□□□ 1.37
VSX1-203ENST00000409285 ALG1Q9BT22 464 aa23.62■■□□□ 1.37
VSX1-203ENST00000409285 BTBD7Q9P203 1132 aa23.62■■□□□ 1.37
VSX1-203ENST00000409285 RBPJLQ9UBG7 517 aa23.62■■□□□ 1.37
VSX1-203ENST00000409285 CTDP1Q9Y5B0 961 aaPredicted RBP23.62■■□□□ 1.37
VSX1-203ENST00000409285 STXBP3O00186 592 aa23.61■■□□□ 1.37
VSX1-203ENST00000409285 CA12O43570 354 aa23.61■■□□□ 1.37
VSX1-203ENST00000409285 DTNBO60941 627 aa23.61■■□□□ 1.37
VSX1-203ENST00000409285 PDIA4P13667 645 aaKnown RBP23.61■■□□□ 1.37
VSX1-203ENST00000409285 SNAP25P60880 206 aa23.61■■□□□ 1.37
VSX1-203ENST00000409285 FAM110CQ1W6H9 321 aa23.61■■□□□ 1.37
VSX1-203ENST00000409285 CCDC174Q6PII3 467 aa23.61■■□□□ 1.37
VSX1-203ENST00000409285 HEATR3Q7Z4Q2 680 aa23.61■■□□□ 1.37
VSX1-203ENST00000409285 CCDC12Q8WUD4 166 aaPredicted RBP23.61■■□□□ 1.37
VSX1-203ENST00000409285 PCDHA1Q9Y5I3 950 aa23.61■■□□□ 1.37
VSX1-203ENST00000409285 ABCB11O95342 1321 aa23.61■■□□□ 1.37
VSX1-203ENST00000409285 PLXNA1Q9UIW2 1896 aa23.61■■□□□ 1.37
VSX1-203ENST00000409285 ESYT2A0FGR8 921 aa23.6■■□□□ 1.37
VSX1-203ENST00000409285 XBP1P17861 261 aa23.6■■□□□ 1.37
VSX1-203ENST00000409285 SLC4A3P48751 1232 aa23.6■■□□□ 1.37
VSX1-203ENST00000409285 CCDC148Q8NFR7 591 aa23.6■■□□□ 1.37
VSX1-203ENST00000409285 GPKOWQ92917 476 aaPredicted RBP eCLIP23.6■■□□□ 1.37
VSX1-203ENST00000409285 AIFM3Q96NN9 605 aa23.6■■□□□ 1.37
VSX1-203ENST00000409285 MAF1Q9H063 256 aa23.6■■□□□ 1.37
VSX1-203ENST00000409285 SPATC1LQ9H0A9 340 aa23.6■■□□□ 1.37
VSX1-203ENST00000409285 TXNRD2Q9NNW7 524 aa23.6■■□□□ 1.37
VSX1-203ENST00000409285 FOXD4L1Q9NU39 408 aa23.6■■□□□ 1.37
VSX1-203ENST00000409285 WBP1LQ9NX94 342 aa23.6■■□□□ 1.37
VSX1-203ENST00000409285 CCPG1Q9ULG6 757 aa23.6■■□□□ 1.37
VSX1-203ENST00000409285 TLR2O60603 784 aa23.59■■□□□ 1.37
VSX1-203ENST00000409285 COPB2P35606 906 aa23.59■■□□□ 1.37
VSX1-203ENST00000409285 STAT3P40763 770 aa23.59■■□□□ 1.37
VSX1-203ENST00000409285 ERVK-9P63128 1117 aa23.59■■□□□ 1.37
VSX1-203ENST00000409285 ERVK-24P63145 666 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms