RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 SNAP25P60880 206 aa11.42□□□□□ -0.58
NIF3L1-202ENST00000409020 MFSD14CQ5VZR4 134 aa11.42□□□□□ -0.58
NIF3L1-202ENST00000409020 SLFN13Q68D06 897 aa11.42□□□□□ -0.58
NIF3L1-202ENST00000409020 TBC1D10CQ8IV04 446 aa11.42□□□□□ -0.58
NIF3L1-202ENST00000409020 MAML3Q96JK9 1138 aa11.42□□□□□ -0.58
NIF3L1-202ENST00000409020 HTATIP2Q9BUP3 242 aa11.42□□□□□ -0.58
NIF3L1-202ENST00000409020 ZNF287Q9HBT7 754 aa11.42□□□□□ -0.58
NIF3L1-202ENST00000409020 ANAPC4Q9UJX5 808 aa11.42□□□□□ -0.58
NIF3L1-202ENST00000409020 STX8Q9UNK0 236 aa11.42□□□□□ -0.58
NIF3L1-202ENST00000409020 CCDC171Q6TFL3 1326 aa11.41□□□□□ -0.58
NIF3L1-202ENST00000409020 SPTBN5Q9NRC6 3674 aaKnown RBP11.41□□□□□ -0.58
NIF3L1-202ENST00000409020 TSPY2A6NKD2 308 aa11.41□□□□□ -0.58
NIF3L1-202ENST00000409020 STRNO43815 780 aa11.41□□□□□ -0.58
NIF3L1-202ENST00000409020 RANBP6O60518 1105 aaKnown RBP11.41□□□□□ -0.58
NIF3L1-202ENST00000409020 SLC3A2P08195 630 aaKnown RBP11.41□□□□□ -0.58
NIF3L1-202ENST00000409020 FCER1AP12319 257 aa11.41□□□□□ -0.58
NIF3L1-202ENST00000409020 GSPT1P15170 499 aaKnown RBP11.41□□□□□ -0.58
NIF3L1-202ENST00000409020 DMTNQ08495 405 aa11.41□□□□□ -0.58
NIF3L1-202ENST00000409020 ALX1Q15699 326 aa11.41□□□□□ -0.58
NIF3L1-202ENST00000409020 SNRNP48Q6IEG0 339 aaKnown RBP11.41□□□□□ -0.58
NIF3L1-202ENST00000409020 CPXCR1Q8N123 301 aa11.41□□□□□ -0.58
NIF3L1-202ENST00000409020 ANKLE1Q8NAG6 615 aa11.41□□□□□ -0.58
NIF3L1-202ENST00000409020 SPRYD3Q8NCJ5 442 aa11.41□□□□□ -0.58
NIF3L1-202ENST00000409020 GMCL1P1Q8NEA9 526 aa11.41□□□□□ -0.58
NIF3L1-202ENST00000409020 MMP19Q99542 508 aa11.41□□□□□ -0.58
NIF3L1-202ENST00000409020 C11orf49Q9H6J7 331 aa11.41□□□□□ -0.58
NIF3L1-202ENST00000409020 RAVER2Q9HCJ3 691 aaKnown RBP11.41□□□□□ -0.58
NIF3L1-202ENST00000409020 MTMR7Q9Y216 660 aa11.41□□□□□ -0.58
NIF3L1-202ENST00000409020 EVI5O60447 810 aa11.4□□□□□ -0.58
NIF3L1-202ENST00000409020 SLC25A27O95847 323 aa11.4□□□□□ -0.58
NIF3L1-202ENST00000409020 FGRP09769 529 aa11.4□□□□□ -0.58
NIF3L1-202ENST00000409020 COL6A1P12109 1028 aa11.4□□□□□ -0.58
NIF3L1-202ENST00000409020 BMP3P12645 472 aa11.4□□□□□ -0.58
NIF3L1-202ENST00000409020 TERF1P54274 439 aa11.4□□□□□ -0.58
NIF3L1-202ENST00000409020 RRP12Q5JTH9 1297 aaKnown RBP11.4□□□□□ -0.58
NIF3L1-202ENST00000409020 OLFML2BQ68BL8 750 aa11.4□□□□□ -0.58
NIF3L1-202ENST00000409020 CWC27Q6UX04 472 aaKnown RBP11.4□□□□□ -0.58
NIF3L1-202ENST00000409020 KCTD1Q719H9 257 aa11.4□□□□□ -0.58
NIF3L1-202ENST00000409020 C7orf61Q8IZ16 206 aa11.4□□□□□ -0.58
NIF3L1-202ENST00000409020 ABRAQ8N0Z2 381 aa11.4□□□□□ -0.58
NIF3L1-202ENST00000409020 PRPF38AQ8NAV1 312 aaKnown RBP11.4□□□□□ -0.58
NIF3L1-202ENST00000409020 SLC38A10Q9HBR0 1119 aa11.4□□□□□ -0.58
NIF3L1-202ENST00000409020 RBM27Q9P2N5 1060 aaKnown RBP11.4□□□□□ -0.58
NIF3L1-202ENST00000409020 DDX20Q9UHI6 824 aaKnown RBP11.4□□□□□ -0.58
NIF3L1-202ENST00000409020 ISY1Q9ULR0 285 aaKnown RBP11.4□□□□□ -0.58
NIF3L1-202ENST00000409020 FRMPD3Q5JV73 1810 aa11.4□□□□□ -0.58
NIF3L1-202ENST00000409020 TMEM232C9JQI7 657 aa11.4□□□□□ -0.59
NIF3L1-202ENST00000409020 ORC4O43929 436 aa11.4□□□□□ -0.59
NIF3L1-202ENST00000409020 ZNF792Q3KQV3 632 aa11.4□□□□□ -0.59
NIF3L1-202ENST00000409020 PPP4R3BQ5MIZ7 849 aa11.4□□□□□ -0.59
NIF3L1-202ENST00000409020 LENG1Q96BZ8 264 aaPredicted RBP11.4□□□□□ -0.59
NIF3L1-202ENST00000409020 TEX13BQ9BXU2 312 aa11.4□□□□□ -0.59
NIF3L1-202ENST00000409020 PRO3102Q9H379 93 aa11.4□□□□□ -0.59
NIF3L1-202ENST00000409020 TOMM22Q9NS69 142 aa11.4□□□□□ -0.59
NIF3L1-202ENST00000409020 ZMYND8Q9ULU4 1186 aaPredicted RBP11.4□□□□□ -0.59
NIF3L1-202ENST00000409020 NEDD4P46934 1319 aa11.39□□□□□ -0.59
NIF3L1-202ENST00000409020 SYN1P17600 705 aa11.39□□□□□ -0.59
NIF3L1-202ENST00000409020 NOVP48745 357 aa11.39□□□□□ -0.59
NIF3L1-202ENST00000409020 LRRC26Q2I0M4 334 aa11.39□□□□□ -0.59
NIF3L1-202ENST00000409020 GJC2Q5T442 439 aaPredicted RBP11.39□□□□□ -0.59
NIF3L1-202ENST00000409020 PRUNE2Q8WUY3 3088 aa11.39□□□□□ -0.59
NIF3L1-202ENST00000409020 GMCL1Q96IK5 515 aa11.39□□□□□ -0.59
NIF3L1-202ENST00000409020 HOMER2Q9NSB8 354 aa11.39□□□□□ -0.59
NIF3L1-202ENST00000409020 KCNG1Q9UIX4 513 aa11.39□□□□□ -0.59
NIF3L1-202ENST00000409020 FEM1BQ9UK73 627 aa11.39□□□□□ -0.59
NIF3L1-202ENST00000409020 ZNF536O15090 1300 aa11.38□□□□□ -0.59
NIF3L1-202ENST00000409020 ZMYM6O95789 1325 aa11.38□□□□□ -0.59
NIF3L1-202ENST00000409020 PITPNM1O00562 1244 aa11.38□□□□□ -0.59
NIF3L1-202ENST00000409020 ZBED4O75132 1171 aa11.38□□□□□ -0.59
NIF3L1-202ENST00000409020 SLC1A4P43007 532 aa11.38□□□□□ -0.59
NIF3L1-202ENST00000409020 FXR1P51114 621 aaKnown RBP eCLIP11.38□□□□□ -0.59
NIF3L1-202ENST00000409020 FAM193AP78312 1265 aa11.38□□□□□ -0.59
NIF3L1-202ENST00000409020 KCTD2Q14681 263 aa11.38□□□□□ -0.59
NIF3L1-202ENST00000409020 TMEM132AQ24JP5 1023 aa11.38□□□□□ -0.59
NIF3L1-202ENST00000409020 TTBK2Q6IQ55 1244 aa11.38□□□□□ -0.59
NIF3L1-202ENST00000409020 FGD4Q96M96 766 aa11.38□□□□□ -0.59
NIF3L1-202ENST00000409020 AGBL1Q96MI9 1066 aa11.38□□□□□ -0.59
NIF3L1-202ENST00000409020 SYNPO2Q9UMS6 1093 aa11.38□□□□□ -0.59
NIF3L1-202ENST00000409020 DDX49Q9Y6V7 483 aaKnown RBP11.38□□□□□ -0.59
NIF3L1-202ENST00000409020 ATP2A1O14983 1001 aa11.37□□□□□ -0.59
NIF3L1-202ENST00000409020 STAT2P52630 851 aa11.37□□□□□ -0.59
NIF3L1-202ENST00000409020 ATN1P54259 1190 aaPredicted RBP11.37□□□□□ -0.59
NIF3L1-202ENST00000409020 SLC20A2Q08357 652 aa11.37□□□□□ -0.59
NIF3L1-202ENST00000409020 RCSD1Q6JBY9 416 aa11.37□□□□□ -0.59
NIF3L1-202ENST00000409020 RASEFQ8IZ41 740 aa11.37□□□□□ -0.59
NIF3L1-202ENST00000409020 HS6ST3Q8IZP7 471 aa11.37□□□□□ -0.59
NIF3L1-202ENST00000409020 TMEM47Q9BQJ4 181 aa11.37□□□□□ -0.59
NIF3L1-202ENST00000409020 ZKSCAN3Q9BRR0 538 aa11.37□□□□□ -0.59
NIF3L1-202ENST00000409020 TINF2Q9BSI4 451 aa11.37□□□□□ -0.59
NIF3L1-202ENST00000409020 SENP6Q9GZR1 1112 aaPredicted RBP11.37□□□□□ -0.59
NIF3L1-202ENST00000409020 DIAPH3Q9NSV4 1193 aa11.37□□□□□ -0.59
NIF3L1-202ENST00000409020 NR2E3Q9Y5X4 410 aa11.37□□□□□ -0.59
NIF3L1-202ENST00000409020 FRMPD2Q68DX3 1309 aaPredicted RBP11.37□□□□□ -0.59
NIF3L1-202ENST00000409020 DNAJC25-GNG10A0A024R161 153 aa11.36□□□□□ -0.59
NIF3L1-202ENST00000409020 SEPT4O43236 478 aa11.36□□□□□ -0.59
NIF3L1-202ENST00000409020 SLC16A2P36021 539 aa11.36□□□□□ -0.59
NIF3L1-202ENST00000409020 IKQ13123 557 aaPredicted RBP11.36□□□□□ -0.59
NIF3L1-202ENST00000409020 AKNAD1Q5T1N1 836 aa11.36□□□□□ -0.59
NIF3L1-202ENST00000409020 CCDC174Q6PII3 467 aa11.36□□□□□ -0.59
NIF3L1-202ENST00000409020 SKAP1Q86WV1 359 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms