RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 ABHD16BQ9H3Z7 469 aa10.68□□□□□ -0.7
SNORD88A-201ENST00000408314 SPC25Q9HBM1 224 aa10.68□□□□□ -0.7
SNORD88A-201ENST00000408314 XPNPEP3Q9NQH7 507 aa10.68□□□□□ -0.7
SNORD88A-201ENST00000408314 FAM184BQ9ULE4 1060 aa10.68□□□□□ -0.7
SNORD88A-201ENST00000408314 TRIOBPQ9H2D6 2365 aa10.68□□□□□ -0.7
SNORD88A-201ENST00000408314 LOC102724159A0A0B4J2E5 919 aa10.67□□□□□ -0.7
SNORD88A-201ENST00000408314 POTEB2H3BUK9 544 aa10.67□□□□□ -0.7
SNORD88A-201ENST00000408314 NMT2O60551 498 aa10.67□□□□□ -0.7
SNORD88A-201ENST00000408314 MYCNP04198 464 aaPredicted RBP10.67□□□□□ -0.7
SNORD88A-201ENST00000408314 ICAM1P05362 532 aa10.67□□□□□ -0.7
SNORD88A-201ENST00000408314 ALAS1P13196 640 aa10.67□□□□□ -0.7
SNORD88A-201ENST00000408314 BMP8BP34820 402 aa10.67□□□□□ -0.7
SNORD88A-201ENST00000408314 PWP2Q15269 919 aaKnown RBP10.67□□□□□ -0.7
SNORD88A-201ENST00000408314 SYDE2Q5VT97 1194 aa10.67□□□□□ -0.7
SNORD88A-201ENST00000408314 BTNL9Q6UXG8 535 aa10.67□□□□□ -0.7
SNORD88A-201ENST00000408314 LBHD1Q9BQE6 289 aaPredicted RBP10.67□□□□□ -0.7
SNORD88A-201ENST00000408314 TMEM47Q9BQJ4 181 aa10.67□□□□□ -0.7
SNORD88A-201ENST00000408314 HOMER2Q9NSB8 354 aa10.67□□□□□ -0.7
SNORD88A-201ENST00000408314 RBM27Q9P2N5 1060 aaKnown RBP10.67□□□□□ -0.7
SNORD88A-201ENST00000408314 ZHX1Q9UKY1 873 aaPredicted RBP10.67□□□□□ -0.7
SNORD88A-201ENST00000408314 CCPG1Q9ULG6 757 aa10.67□□□□□ -0.7
SNORD88A-201ENST00000408314 PRR12Q9ULL5 1215 aa10.67□□□□□ -0.7
SNORD88A-201ENST00000408314 MTMR7Q9Y216 660 aa10.67□□□□□ -0.7
SNORD88A-201ENST00000408314 RIPK3Q9Y572 518 aa10.67□□□□□ -0.7
SNORD88A-201ENST00000408314 ALPK3Q96L96 1907 aa10.66□□□□□ -0.7
SNORD88A-201ENST00000408314 WDR19Q8NEZ3 1342 aa10.66□□□□□ -0.7
SNORD88A-201ENST00000408314 B4DLN1 442 aa10.66□□□□□ -0.7
SNORD88A-201ENST00000408314 FXR1P51114 621 aaKnown RBP eCLIP10.66□□□□□ -0.7
SNORD88A-201ENST00000408314 MRPL12P52815 198 aaKnown RBP10.66□□□□□ -0.7
SNORD88A-201ENST00000408314 TRDNQ13061 729 aa10.66□□□□□ -0.7
SNORD88A-201ENST00000408314 LRRC41Q15345 812 aa10.66□□□□□ -0.7
SNORD88A-201ENST00000408314 LRRC26Q2I0M4 334 aa10.66□□□□□ -0.7
SNORD88A-201ENST00000408314 GJC2Q5T442 439 aaPredicted RBP10.66□□□□□ -0.7
SNORD88A-201ENST00000408314 C1orf53Q5VUE5 145 aa10.66□□□□□ -0.7
SNORD88A-201ENST00000408314 CCDC174Q6PII3 467 aa10.66□□□□□ -0.7
SNORD88A-201ENST00000408314 TBC1D10CQ8IV04 446 aa10.66□□□□□ -0.7
SNORD88A-201ENST00000408314 TRERF1Q96PN7 1200 aa10.66□□□□□ -0.7
SNORD88A-201ENST00000408314 UBAC1Q9BSL1 405 aa10.66□□□□□ -0.7
SNORD88A-201ENST00000408314 TSEN34Q9BSV6 310 aaKnown RBP10.66□□□□□ -0.7
SNORD88A-201ENST00000408314 MAF1Q9H063 256 aa10.66□□□□□ -0.7
SNORD88A-201ENST00000408314 PRO3102Q9H379 93 aa10.66□□□□□ -0.7
SNORD88A-201ENST00000408314 KAT14Q9H8E8 782 aa10.66□□□□□ -0.7
SNORD88A-201ENST00000408314 A1CFQ9NQ94 594 aaKnown RBP10.66□□□□□ -0.7
SNORD88A-201ENST00000408314 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.66□□□□□ -0.7
SNORD88A-201ENST00000408314 ADD3Q9UEY8 706 aaKnown RBP10.66□□□□□ -0.7
SNORD88A-201ENST00000408314 ZMYND8Q9ULU4 1186 aaPredicted RBP10.66□□□□□ -0.7
SNORD88A-201ENST00000408314 NEDD4P46934 1319 aa10.65□□□□□ -0.7
SNORD88A-201ENST00000408314 MOXD2PA6NHM9 499 aa10.65□□□□□ -0.7
SNORD88A-201ENST00000408314 DUSP11O75319 330 aaKnown RBP10.65□□□□□ -0.7
SNORD88A-201ENST00000408314 ZNF865P0CJ78 1059 aaPredicted RBP10.65□□□□□ -0.7
SNORD88A-201ENST00000408314 PDHBP11177 359 aa10.65□□□□□ -0.7
SNORD88A-201ENST00000408314 RTP1P59025 263 aa10.65□□□□□ -0.7
SNORD88A-201ENST00000408314 ZNF543Q08ER8 600 aa10.65□□□□□ -0.7
SNORD88A-201ENST00000408314 ACVR2BQ13705 512 aa10.65□□□□□ -0.7
SNORD88A-201ENST00000408314 ASPRV1Q53RT3 343 aa10.65□□□□□ -0.7
SNORD88A-201ENST00000408314 PRAMEF19Q5SWL8 479 aa10.65□□□□□ -0.7
SNORD88A-201ENST00000408314 ARMCX2Q7L311 632 aa10.65□□□□□ -0.7
SNORD88A-201ENST00000408314 FAM133AQ8N9E0 248 aa10.65□□□□□ -0.7
SNORD88A-201ENST00000408314 PCSK9Q8NBP7 692 aaKnown RBP10.65□□□□□ -0.7
SNORD88A-201ENST00000408314 NUP133Q8WUM0 1156 aa10.65□□□□□ -0.7
SNORD88A-201ENST00000408314 AGBL1Q96MI9 1066 aa10.65□□□□□ -0.7
SNORD88A-201ENST00000408314 GDF15Q99988 308 aa10.65□□□□□ -0.7
SNORD88A-201ENST00000408314 RANBP17Q9H2T7 1088 aaKnown RBP10.65□□□□□ -0.7
SNORD88A-201ENST00000408314 INCENPQ9NQS7 918 aa10.65□□□□□ -0.7
SNORD88A-201ENST00000408314 PHF24Q9UPV7 400 aa10.65□□□□□ -0.7
SNORD88A-201ENST00000408314 U3KPZ7 1027 aaPredicted RBP10.65□□□□□ -0.7
SNORD88A-201ENST00000408314 ZNF536O15090 1300 aa10.64□□□□□ -0.71
SNORD88A-201ENST00000408314 MROH7Q68CQ1 1323 aa10.64□□□□□ -0.71
SNORD88A-201ENST00000408314 KDM4AO75164 1064 aa10.64□□□□□ -0.71
SNORD88A-201ENST00000408314 SNAI1O95863 264 aaPredicted RBP10.64□□□□□ -0.71
SNORD88A-201ENST00000408314 SNHG28P0DPA3 235 aa10.64□□□□□ -0.71
SNORD88A-201ENST00000408314 ADCYAP1R1P41586 468 aa10.64□□□□□ -0.71
SNORD88A-201ENST00000408314 ATN1P54259 1190 aaPredicted RBP10.64□□□□□ -0.71
SNORD88A-201ENST00000408314 SART3Q15020 963 aaKnown RBP10.64□□□□□ -0.71
SNORD88A-201ENST00000408314 SNX17Q15036 470 aa10.64□□□□□ -0.71
SNORD88A-201ENST00000408314 ANO1Q5XXA6 986 aa10.64□□□□□ -0.71
SNORD88A-201ENST00000408314 NSMFQ6X4W1 530 aa10.64□□□□□ -0.71
SNORD88A-201ENST00000408314 SLC39A5Q6ZMH5 540 aa10.64□□□□□ -0.71
SNORD88A-201ENST00000408314 PNMA1Q8ND90 353 aa10.64□□□□□ -0.71
SNORD88A-201ENST00000408314 ZSCAN10Q96SZ4 725 aaPredicted RBP10.64□□□□□ -0.71
SNORD88A-201ENST00000408314 UBE2OQ9C0C9 1292 aaKnown RBP10.64□□□□□ -0.71
SNORD88A-201ENST00000408314 GPCPD1Q9NPB8 672 aa10.64□□□□□ -0.71
SNORD88A-201ENST00000408314 ATP11BQ9Y2G3 1177 aa10.64□□□□□ -0.71
SNORD88A-201ENST00000408314 TNKSO95271 1327 aa10.63□□□□□ -0.71
SNORD88A-201ENST00000408314 FRMPD2Q68DX3 1309 aaPredicted RBP10.63□□□□□ -0.71
SNORD88A-201ENST00000408314 ERICH2A1L162 156 aa10.63□□□□□ -0.71
SNORD88A-201ENST00000408314 B4E1Z4 1266 aa10.63□□□□□ -0.71
SNORD88A-201ENST00000408314 ADAMTS4O75173 837 aa10.63□□□□□ -0.71
SNORD88A-201ENST00000408314 GSPT1P15170 499 aaKnown RBP10.63□□□□□ -0.71
SNORD88A-201ENST00000408314 SYN1P17600 705 aa10.63□□□□□ -0.71
SNORD88A-201ENST00000408314 CST5P28325 142 aaPredicted RBP10.63□□□□□ -0.71
SNORD88A-201ENST00000408314 MAGEA10P43363 369 aaPredicted RBP10.63□□□□□ -0.71
SNORD88A-201ENST00000408314 TRAF1Q13077 416 aa10.63□□□□□ -0.71
SNORD88A-201ENST00000408314 RALYLQ86SE5 291 aaKnown RBP10.63□□□□□ -0.71
SNORD88A-201ENST00000408314 CCDC144CPQ8IYA2 1237 aa10.63□□□□□ -0.71
SNORD88A-201ENST00000408314 TDHQ8IZJ6 230 aa10.63□□□□□ -0.71
SNORD88A-201ENST00000408314 ANKS1AQ92625 1134 aa10.63□□□□□ -0.71
SNORD88A-201ENST00000408314 GLT1D1Q96MS3 346 aa10.63□□□□□ -0.71
SNORD88A-201ENST00000408314 SEZ6LQ9BYH1 1024 aa10.63□□□□□ -0.71
SNORD88A-201ENST00000408314 VTA1Q9NP79 307 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms