RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 USP38Q8NB14 1042 aa25.1■■□□□ 1.61
RHBDD3-202ENST00000406335 HOMER2Q9NSB8 354 aa25.1■■□□□ 1.61
RHBDD3-202ENST00000406335 MSRAQ9UJ68 235 aa25.1■■□□□ 1.61
RHBDD3-202ENST00000406335 FEM1BQ9UK73 627 aa25.1■■□□□ 1.61
RHBDD3-202ENST00000406335 CST5P28325 142 aaPredicted RBP25.09■■□□□ 1.61
RHBDD3-202ENST00000406335 IKQ13123 557 aaPredicted RBP25.09■■□□□ 1.61
RHBDD3-202ENST00000406335 TMEM240Q5SV17 173 aa25.09■■□□□ 1.61
RHBDD3-202ENST00000406335 PSRC1Q6PGN9 363 aaPredicted RBP25.09■■□□□ 1.61
RHBDD3-202ENST00000406335 ARMCX2Q7L311 632 aa25.09■■□□□ 1.61
RHBDD3-202ENST00000406335 CHST13Q8NET6 341 aa25.09■■□□□ 1.61
RHBDD3-202ENST00000406335 PBX4Q9BYU1 374 aa25.09■■□□□ 1.61
RHBDD3-202ENST00000406335 PRDM12Q9H4Q4 367 aa25.09■■□□□ 1.61
RHBDD3-202ENST00000406335 TNFRSF10AO00220 468 aa25.08■■□□□ 1.61
RHBDD3-202ENST00000406335 ATP2A1O14983 1001 aa25.08■■□□□ 1.61
RHBDD3-202ENST00000406335 IGFBP4P22692 258 aa25.08■■□□□ 1.61
RHBDD3-202ENST00000406335 PBX2P40425 430 aa25.08■■□□□ 1.61
RHBDD3-202ENST00000406335 CDK7P50613 346 aa25.08■■□□□ 1.61
RHBDD3-202ENST00000406335 GJA9P57773 515 aa25.08■■□□□ 1.61
RHBDD3-202ENST00000406335 ZNF365Q70YC5 407 aa25.08■■□□□ 1.61
RHBDD3-202ENST00000406335 MTIF3Q9H2K0 278 aaKnown RBP25.08■■□□□ 1.61
RHBDD3-202ENST00000406335 GSG1L2A8MUP6 293 aa25.07■■□□□ 1.6
RHBDD3-202ENST00000406335 PRDM1O75626 825 aa25.07■■□□□ 1.6
RHBDD3-202ENST00000406335 HDAC1Q13547 482 aaPredicted RBP25.07■■□□□ 1.6
RHBDD3-202ENST00000406335 GIMAP6Q6P9H5 292 aa25.07■■□□□ 1.6
RHBDD3-202ENST00000406335 C16orf59Q7L2K0 433 aa25.07■■□□□ 1.6
RHBDD3-202ENST00000406335 CCDC144CPQ8IYA2 1237 aa25.07■■□□□ 1.6
RHBDD3-202ENST00000406335 KBTBD3Q8NAB2 608 aa25.07■■□□□ 1.6
RHBDD3-202ENST00000406335 IL27Q8NEV9 243 aa25.07■■□□□ 1.6
RHBDD3-202ENST00000406335 EXOC6Q8TAG9 804 aa25.07■■□□□ 1.6
RHBDD3-202ENST00000406335 SLC38A10Q9HBR0 1119 aa25.07■■□□□ 1.6
RHBDD3-202ENST00000406335 BEX3Q00994 111 aa25.06■■□□□ 1.6
RHBDD3-202ENST00000406335 TNFAIP2Q03169 654 aa25.06■■□□□ 1.6
RHBDD3-202ENST00000406335 CCDC85BQ15834 202 aaPredicted RBP25.06■■□□□ 1.6
RHBDD3-202ENST00000406335 ANKRD45Q5TZF3 282 aa25.06■■□□□ 1.6
RHBDD3-202ENST00000406335 LRRC47Q8N1G4 583 aaKnown RBP25.06■■□□□ 1.6
RHBDD3-202ENST00000406335 PI4K2BQ8TCG2 481 aa25.06■■□□□ 1.6
RHBDD3-202ENST00000406335 TTC41PQ6P2S7 1318 aa25.06■■□□□ 1.6
RHBDD3-202ENST00000406335 TTLL1O95922 423 aa25.05■■□□□ 1.6
RHBDD3-202ENST00000406335 FGBP02675 491 aa25.05■■□□□ 1.6
RHBDD3-202ENST00000406335 TSPY3P0CV98 308 aa25.05■■□□□ 1.6
RHBDD3-202ENST00000406335 TSPY8P0CW00 308 aa25.05■■□□□ 1.6
RHBDD3-202ENST00000406335 CYP2C18P33260 490 aa25.05■■□□□ 1.6
RHBDD3-202ENST00000406335 OAZ1P54368 228 aa25.05■■□□□ 1.6
RHBDD3-202ENST00000406335 RAB30Q15771 203 aa25.05■■□□□ 1.6
RHBDD3-202ENST00000406335 SLFN13Q68D06 897 aa25.05■■□□□ 1.6
RHBDD3-202ENST00000406335 CHMP4CQ96CF2 233 aa25.05■■□□□ 1.6
RHBDD3-202ENST00000406335 CEP95Q96GE4 821 aa25.05■■□□□ 1.6
RHBDD3-202ENST00000406335 AP5M1Q9H0R1 490 aa25.05■■□□□ 1.6
RHBDD3-202ENST00000406335 UPF3AQ9H1J1 476 aaKnown RBP25.05■■□□□ 1.6
RHBDD3-202ENST00000406335 SUPT16HQ9Y5B9 1047 aaKnown RBP25.05■■□□□ 1.6
RHBDD3-202ENST00000406335 EYSQ5T1H1 3165 aa25.04■■□□□ 1.6
RHBDD3-202ENST00000406335 TMEM232C9JQI7 657 aa25.04■■□□□ 1.6
RHBDD3-202ENST00000406335 ADCY6O43306 1168 aa25.04■■□□□ 1.6
RHBDD3-202ENST00000406335 ZEB2O60315 1214 aa25.04■■□□□ 1.6
RHBDD3-202ENST00000406335 BMP3P12645 472 aa25.04■■□□□ 1.6
RHBDD3-202ENST00000406335 GNAT2P19087 354 aa25.04■■□□□ 1.6
RHBDD3-202ENST00000406335 FAM126BQ8IXS8 530 aa25.04■■□□□ 1.6
RHBDD3-202ENST00000406335 APPBP2Q92624 585 aa25.04■■□□□ 1.6
RHBDD3-202ENST00000406335 ACAD9Q9H845 621 aa25.04■■□□□ 1.6
RHBDD3-202ENST00000406335 SLC28A3Q9HAS3 691 aa25.04■■□□□ 1.6
RHBDD3-202ENST00000406335 IL23AQ9NPF7 189 aa25.04■■□□□ 1.6
RHBDD3-202ENST00000406335 MTMR4Q9NYA4 1195 aa25.04■■□□□ 1.6
RHBDD3-202ENST00000406335 SALL3Q9BXA9 1300 aa25.04■■□□□ 1.6
RHBDD3-202ENST00000406335 SMCHD1A6NHR9 2005 aa25.03■■□□□ 1.6
RHBDD3-202ENST00000406335 RNF113AO15541 343 aaKnown RBP25.03■■□□□ 1.6
RHBDD3-202ENST00000406335 CNTN2Q02246 1040 aa25.03■■□□□ 1.6
RHBDD3-202ENST00000406335 CXCL17Q6UXB2 119 aa25.03■■□□□ 1.6
RHBDD3-202ENST00000406335 ATXN2LQ8WWM7 1075 aaKnown RBP25.03■■□□□ 1.6
RHBDD3-202ENST00000406335 OSBP2Q969R2 916 aa25.03■■□□□ 1.6
RHBDD3-202ENST00000406335 MKL1Q969V6 931 aa25.03■■□□□ 1.6
RHBDD3-202ENST00000406335 ZNFX1Q9P2E3 1918 aaKnown RBP25.02■■□□□ 1.6
RHBDD3-202ENST00000406335 ASB14A6NK59 587 aa25.02■■□□□ 1.6
RHBDD3-202ENST00000406335 ERC2O15083 957 aa25.02■■□□□ 1.6
RHBDD3-202ENST00000406335 GPAA1O43292 621 aa25.02■■□□□ 1.6
RHBDD3-202ENST00000406335 CABYRO75952 493 aa25.02■■□□□ 1.6
RHBDD3-202ENST00000406335 SLC3A2P08195 630 aaKnown RBP25.02■■□□□ 1.6
RHBDD3-202ENST00000406335 FDX1P10109 184 aa25.02■■□□□ 1.6
RHBDD3-202ENST00000406335 MX1P20591 662 aa25.02■■□□□ 1.6
RHBDD3-202ENST00000406335 PDE4BQ07343 736 aa25.02■■□□□ 1.6
RHBDD3-202ENST00000406335 CHURC1Q8WUH1 139 aa25.02■■□□□ 1.6
RHBDD3-202ENST00000406335 NACAP1Q9BZK3 213 aa25.02■■□□□ 1.6
RHBDD3-202ENST00000406335 HIPK3Q9H422 1215 aa25.02■■□□□ 1.6
RHBDD3-202ENST00000406335 THEGQ9P2T0 379 aa25.02■■□□□ 1.6
RHBDD3-202ENST00000406335 COL11A1P12107 1806 aaPredicted RBP25.01■■□□□ 1.59
RHBDD3-202ENST00000406335 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.01■■□□□ 1.59
RHBDD3-202ENST00000406335 DYNC1LI2O43237 492 aaPredicted RBP25.01■■□□□ 1.59
RHBDD3-202ENST00000406335 STAT2P52630 851 aa25.01■■□□□ 1.59
RHBDD3-202ENST00000406335 ITGA7Q13683 1181 aa25.01■■□□□ 1.59
RHBDD3-202ENST00000406335 AAMPQ13685 434 aa25.01■■□□□ 1.59
RHBDD3-202ENST00000406335 LRRFIP1Q32MZ4 808 aaKnown RBP25.01■■□□□ 1.59
RHBDD3-202ENST00000406335 AKNAD1Q5T1N1 836 aa25.01■■□□□ 1.59
RHBDD3-202ENST00000406335 OTOP2Q7RTS6 562 aa25.01■■□□□ 1.59
RHBDD3-202ENST00000406335 GMCL1P1Q8NEA9 526 aa25.01■■□□□ 1.59
RHBDD3-202ENST00000406335 NKX2-4Q9H2Z4 354 aa25.01■■□□□ 1.59
RHBDD3-202ENST00000406335 RNF146Q9NTX7 359 aa25.01■■□□□ 1.59
RHBDD3-202ENST00000406335 ZBTB47Q9UFB7 747 aaPredicted RBP25.01■■□□□ 1.59
RHBDD3-202ENST00000406335 VCANP13611 3396 aa25.01■■□□□ 1.59
RHBDD3-202ENST00000406335 IGKV6D-41A0A0C4DH26 115 aa25■■□□□ 1.59
RHBDD3-202ENST00000406335 PATL2C9JE40 543 aaKnown RBP25■■□□□ 1.59
RHBDD3-202ENST00000406335 ZFYP08048 801 aaPredicted RBP25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms