RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 ZBTB5O15062 677 aa38.55■■■■□ 3.76
CSNK1E-204ENST00000403904 SSRP1Q08945 709 aaKnown RBP38.55■■■■□ 3.76
CSNK1E-204ENST00000403904 RNF26Q9BY78 433 aaPredicted RBP38.55■■■■□ 3.76
CSNK1E-204ENST00000403904 ZFYVE28Q9HCC9 887 aa38.55■■■■□ 3.76
CSNK1E-204ENST00000403904 TXNRD2Q9NNW7 524 aa38.55■■■■□ 3.76
CSNK1E-204ENST00000403904 BTBD7Q9P203 1132 aa38.55■■■■□ 3.76
CSNK1E-204ENST00000403904 CA12O43570 354 aa38.54■■■■□ 3.76
CSNK1E-204ENST00000403904 FMNL1O95466 1100 aaPredicted RBP38.54■■■■□ 3.76
CSNK1E-204ENST00000403904 TMEM132BQ14DG7 1078 aa38.54■■■■□ 3.76
CSNK1E-204ENST00000403904 TRIM22Q8IYM9 498 aa38.54■■■■□ 3.76
CSNK1E-204ENST00000403904 CPXCR1Q8N123 301 aa38.54■■■■□ 3.76
CSNK1E-204ENST00000403904 MB21D1Q8N884 522 aa38.54■■■■□ 3.76
CSNK1E-204ENST00000403904 RAVER2Q9HCJ3 691 aaKnown RBP38.54■■■■□ 3.76
CSNK1E-204ENST00000403904 SEC63Q9UGP8 760 aaKnown RBP38.54■■■■□ 3.76
CSNK1E-204ENST00000403904 PTPDC1A2A3K4 754 aa38.53■■■■□ 3.76
CSNK1E-204ENST00000403904 PRPF3O43395 683 aaKnown RBP38.53■■■■□ 3.76
CSNK1E-204ENST00000403904 ANP32AP39687 249 aaKnown RBP38.53■■■■□ 3.76
CSNK1E-204ENST00000403904 GTF3C2Q8WUA4 911 aaPredicted RBP38.53■■■■□ 3.76
CSNK1E-204ENST00000403904 DDX11Q96FC9 970 aa38.53■■■■□ 3.76
CSNK1E-204ENST00000403904 LLPHQ9BRT6 129 aaKnown RBP38.53■■■■□ 3.76
CSNK1E-204ENST00000403904 ZNF536O15090 1300 aa38.53■■■■□ 3.76
CSNK1E-204ENST00000403904 PNMA6FA0A0J9YX94 578 aa38.53■■■■□ 3.76
CSNK1E-204ENST00000403904 CNMDO75829 334 aa38.53■■■■□ 3.76
CSNK1E-204ENST00000403904 GCLCP48506 637 aaPredicted RBP38.53■■■■□ 3.76
CSNK1E-204ENST00000403904 AKAP17AQ02040 695 aaKnown RBP38.53■■■■□ 3.76
CSNK1E-204ENST00000403904 BECN1Q14457 450 aa38.53■■■■□ 3.76
CSNK1E-204ENST00000403904 ANKRD13CQ8N6S4 541 aa38.53■■■■□ 3.76
CSNK1E-204ENST00000403904 RNF186Q9NXI6 227 aa38.53■■■■□ 3.76
CSNK1E-204ENST00000403904 RABGAP1Q9Y3P9 1069 aa38.53■■■■□ 3.76
CSNK1E-204ENST00000403904 SMCHD1A6NHR9 2005 aa38.52■■■■□ 3.76
CSNK1E-204ENST00000403904 ADGRA2Q96PE1 1338 aa38.52■■■■□ 3.76
CSNK1E-204ENST00000403904 TRPA1O75762 1119 aa38.52■■■■□ 3.76
CSNK1E-204ENST00000403904 CPA4Q9UI42 421 aa38.52■■■■□ 3.76
CSNK1E-204ENST00000403904 ZNF214Q9UL59 606 aaPredicted RBP38.52■■■■□ 3.76
CSNK1E-204ENST00000403904 TLR2O60603 784 aa38.51■■■■□ 3.76
CSNK1E-204ENST00000403904 PPP1R11O60927 126 aaPredicted RBP38.51■■■■□ 3.76
CSNK1E-204ENST00000403904 PLS1Q14651 629 aa38.51■■■■□ 3.76
CSNK1E-204ENST00000403904 AGBL1Q96MI9 1066 aa38.51■■■■□ 3.76
CSNK1E-204ENST00000403904 R3HDMLQ9H3Y0 253 aa38.51■■■■□ 3.76
CSNK1E-204ENST00000403904 TAL1P17542 331 aaPredicted RBP38.5■■■■□ 3.75
CSNK1E-204ENST00000403904 SMARCC2Q8TAQ2 1214 aa38.5■■■■□ 3.75
CSNK1E-204ENST00000403904 ORC3Q9UBD5 711 aaPredicted RBP38.5■■■■□ 3.75
CSNK1E-204ENST00000403904 SLC4A3P48751 1232 aa38.49■■■■□ 3.75
CSNK1E-204ENST00000403904 PKN1Q16512 942 aa38.49■■■■□ 3.75
CSNK1E-204ENST00000403904 TBC1D8O95759 1140 aa38.48■■■■□ 3.75
CSNK1E-204ENST00000403904 ICAM1P05362 532 aa38.48■■■■□ 3.75
CSNK1E-204ENST00000403904 FDPSP14324 419 aaKnown RBP38.48■■■■□ 3.75
CSNK1E-204ENST00000403904 Q3C1V9 767 aa38.48■■■■□ 3.75
CSNK1E-204ENST00000403904 FBXO11Q86XK2 927 aa38.48■■■■□ 3.75
CSNK1E-204ENST00000403904 FOXD4L1Q9NU39 408 aa38.48■■■■□ 3.75
CSNK1E-204ENST00000403904 RBM27Q9P2N5 1060 aaKnown RBP38.48■■■■□ 3.75
CSNK1E-204ENST00000403904 ZSCAN21Q9Y5A6 473 aaPredicted RBP38.48■■■■□ 3.75
CSNK1E-204ENST00000403904 STK36Q9NRP7 1315 aa38.48■■■■□ 3.75
CSNK1E-204ENST00000403904 OAZ1P54368 228 aa38.48■■■■□ 3.75
CSNK1E-204ENST00000403904 MAP2K1Q02750 393 aaPredicted RBP38.48■■■■□ 3.75
CSNK1E-204ENST00000403904 USH1GQ495M9 461 aa38.48■■■■□ 3.75
CSNK1E-204ENST00000403904 CCPG1Q9ULG6 757 aa38.48■■■■□ 3.75
CSNK1E-204ENST00000403904 ATP2A1O14983 1001 aa38.47■■■■□ 3.75
CSNK1E-204ENST00000403904 DEXIO95424 95 aa38.47■■■■□ 3.75
CSNK1E-204ENST00000403904 STAT3P40763 770 aa38.47■■■■□ 3.75
CSNK1E-204ENST00000403904 ERVK-9P63128 1117 aa38.47■■■■□ 3.75
CSNK1E-204ENST00000403904 ERVK-24P63145 666 aa38.47■■■■□ 3.75
CSNK1E-204ENST00000403904 PFKFB3Q16875 520 aaPredicted RBP38.47■■■■□ 3.75
CSNK1E-204ENST00000403904 SNRNP48Q6IEG0 339 aaKnown RBP38.47■■■■□ 3.75
CSNK1E-204ENST00000403904 C17orf99Q6UX52 265 aa38.47■■■■□ 3.75
CSNK1E-204ENST00000403904 GPKOWQ92917 476 aaPredicted RBP eCLIP38.47■■■■□ 3.752e-6■■□□□ 13
CSNK1E-204ENST00000403904 AMNQ9BXJ7 453 aa38.47■■■■□ 3.75
CSNK1E-204ENST00000403904 TEX13BQ9BXU2 312 aa38.47■■■■□ 3.75
CSNK1E-204ENST00000403904 SPATC1LQ9H0A9 340 aa38.47■■■■□ 3.75
CSNK1E-204ENST00000403904 GPRC5AQ8NFJ5 357 aa38.46■■■■□ 3.75
CSNK1E-204ENST00000403904 MORF4L1Q9UBU8 362 aa38.46■■■■□ 3.75
CSNK1E-204ENST00000403904 BCRP11274 1271 aa38.45■■■■□ 3.75
CSNK1E-204ENST00000403904 SCG2P13521 617 aa38.45■■■■□ 3.75
CSNK1E-204ENST00000403904 HEATR3Q7Z4Q2 680 aa38.45■■■■□ 3.75
CSNK1E-204ENST00000403904 COA7Q96BR5 231 aa38.45■■■■□ 3.75
CSNK1E-204ENST00000403904 AIFM3Q96NN9 605 aa38.45■■■■□ 3.75
CSNK1E-204ENST00000403904 RIPK3Q9Y572 518 aa38.45■■■■□ 3.75
CSNK1E-204ENST00000403904 FAM110CQ1W6H9 321 aa38.44■■■■□ 3.74
CSNK1E-204ENST00000403904 SPRYD3Q8NCJ5 442 aa38.44■■■■□ 3.74
CSNK1E-204ENST00000403904 INTS4Q96HW7 963 aaKnown RBP38.44■■■■□ 3.74
CSNK1E-204ENST00000403904 SMC3Q9UQE7 1217 aa38.44■■■■□ 3.74
CSNK1E-204ENST00000403904 PCDHA1Q9Y5I3 950 aa38.44■■■■□ 3.74
CSNK1E-204ENST00000403904 HSP90AA1P07900 732 aaKnown RBP38.44■■■■□ 3.74
CSNK1E-204ENST00000403904 HMGN5P82970 282 aaKnown RBP38.44■■■■□ 3.74
CSNK1E-204ENST00000403904 WWC2Q6AWC2 1192 aa38.44■■■■□ 3.74
CSNK1E-204ENST00000403904 CFHR5Q9BXR6 569 aa38.44■■■■□ 3.74
CSNK1E-204ENST00000403904 ALAS1P13196 640 aa38.43■■■■□ 3.74
CSNK1E-204ENST00000403904 MOV10L1Q9BXT6 1211 aaKnown RBP38.43■■■■□ 3.74
CSNK1E-204ENST00000403904 HOMER2Q9NSB8 354 aa38.42■■■■□ 3.74
CSNK1E-204ENST00000403904 GJB2P29033 226 aa38.41■■■■□ 3.74
CSNK1E-204ENST00000403904 RIOX2Q8IUF8 465 aa38.41■■■■□ 3.74
CSNK1E-204ENST00000403904 BEGAINQ9BUH8 593 aa38.41■■■■□ 3.74
CSNK1E-204ENST00000403904 FAM184AQ8NB25 1140 aa38.4■■■■□ 3.74
CSNK1E-204ENST00000403904 PNMA2Q9UL42 364 aa38.4■■■■□ 3.74
CSNK1E-204ENST00000403904 WASF1Q92558 559 aa38.4■■■■□ 3.74
CSNK1E-204ENST00000403904 ALG1Q9BT22 464 aa38.4■■■■□ 3.74
CSNK1E-204ENST00000403904 SAGE1Q9NXZ1 904 aa38.4■■■■□ 3.74
CSNK1E-204ENST00000403904 BARHL2Q9NY43 387 aa38.4■■■■□ 3.74
CSNK1E-204ENST00000403904 STXBP3O00186 592 aa38.39■■■■□ 3.74
CSNK1E-204ENST00000403904 TYW1BQ6NUM6 668 aa38.39■■■■□ 3.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms