RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 PSRC1Q6PGN9 363 aaPredicted RBP14.35□□□□□ -0.11
SPTLC1P3-201ENST00000403408 TMEM199Q8N511 208 aa14.35□□□□□ -0.11
SPTLC1P3-201ENST00000403408 RHPN1Q8TCX5 695 aa14.35□□□□□ -0.11
SPTLC1P3-201ENST00000403408 TEX13BQ9BXU2 312 aa14.35□□□□□ -0.11
SPTLC1P3-201ENST00000403408 WNT8AQ9H1J5 351 aa14.35□□□□□ -0.11
SPTLC1P3-201ENST00000403408 SH2D4AQ9H788 454 aa14.35□□□□□ -0.11
SPTLC1P3-201ENST00000403408 KANSL2Q9H9L4 492 aa14.35□□□□□ -0.11
SPTLC1P3-201ENST00000403408 SCN5AQ14524 2016 aa14.34□□□□□ -0.11
SPTLC1P3-201ENST00000403408 EPOPA6NHQ4 379 aa14.34□□□□□ -0.11
SPTLC1P3-201ENST00000403408 ARHGEF15O94989 841 aa14.34□□□□□ -0.11
SPTLC1P3-201ENST00000403408 NDUFB10O96000 172 aa14.34□□□□□ -0.11
SPTLC1P3-201ENST00000403408 CCL23P55773 120 aa14.34□□□□□ -0.11
SPTLC1P3-201ENST00000403408 CNTN2Q02246 1040 aa14.34□□□□□ -0.11
SPTLC1P3-201ENST00000403408 TTF1Q15361 905 aaPredicted RBP14.34□□□□□ -0.11
SPTLC1P3-201ENST00000403408 GNASQ5JWF2 1037 aa14.34□□□□□ -0.11
SPTLC1P3-201ENST00000403408 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.34□□□□□ -0.11
SPTLC1P3-201ENST00000403408 OTOP2Q7RTS6 562 aa14.34□□□□□ -0.11
SPTLC1P3-201ENST00000403408 ZNF467Q7Z7K2 595 aaPredicted RBP14.34□□□□□ -0.11
SPTLC1P3-201ENST00000403408 TET1Q8NFU7 2136 aa14.34□□□□□ -0.11
SPTLC1P3-201ENST00000403408 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.34□□□□□ -0.11
SPTLC1P3-201ENST00000403408 KHSRPQ92945 711 aaKnown RBP eCLIP14.34□□□□□ -0.11
SPTLC1P3-201ENST00000403408 FAM122AQ96E09 287 aa14.34□□□□□ -0.11
SPTLC1P3-201ENST00000403408 SLF1Q9BQI6 1058 aa14.34□□□□□ -0.11
SPTLC1P3-201ENST00000403408 EPHX3Q9H6B9 360 aa14.34□□□□□ -0.11
SPTLC1P3-201ENST00000403408 RAVER2Q9HCJ3 691 aaKnown RBP14.34□□□□□ -0.11
SPTLC1P3-201ENST00000403408 ATP8A2Q9NTI2 1148 aa14.34□□□□□ -0.11
SPTLC1P3-201ENST00000403408 MSRAQ9UJ68 235 aa14.34□□□□□ -0.11
SPTLC1P3-201ENST00000403408 RAD21O60216 631 aa14.33□□□□□ -0.12
SPTLC1P3-201ENST00000403408 RASA1P20936 1047 aa14.33□□□□□ -0.12
SPTLC1P3-201ENST00000403408 SLC4A3P48751 1232 aa14.33□□□□□ -0.12
SPTLC1P3-201ENST00000403408 RAB30Q15771 203 aa14.33□□□□□ -0.12
SPTLC1P3-201ENST00000403408 KRT40Q6A162 431 aa14.33□□□□□ -0.12
SPTLC1P3-201ENST00000403408 CXCL17Q6UXB2 119 aa14.33□□□□□ -0.12
SPTLC1P3-201ENST00000403408 ARMCX2Q7L311 632 aa14.33□□□□□ -0.12
SPTLC1P3-201ENST00000403408 ITPRIPQ8IWB1 547 aa14.33□□□□□ -0.12
SPTLC1P3-201ENST00000403408 CPXCR1Q8N123 301 aa14.33□□□□□ -0.12
SPTLC1P3-201ENST00000403408 VTI1AQ96AJ9 217 aa14.33□□□□□ -0.12
SPTLC1P3-201ENST00000403408 DDX11Q96FC9 970 aa14.33□□□□□ -0.12
SPTLC1P3-201ENST00000403408 NOC4LQ9BVI4 516 aaKnown RBP14.33□□□□□ -0.12
SPTLC1P3-201ENST00000403408 TRPV6Q9H1D0 765 aa14.33□□□□□ -0.12
SPTLC1P3-201ENST00000403408 MROH7Q68CQ1 1323 aa14.33□□□□□ -0.12
SPTLC1P3-201ENST00000403408 MYH7P12883 1935 aa14.33□□□□□ -0.12
SPTLC1P3-201ENST00000403408 LRRC37A2A6NM11 1700 aa14.32□□□□□ -0.12
SPTLC1P3-201ENST00000403408 IGKV6D-41A0A0C4DH26 115 aa14.32□□□□□ -0.12
SPTLC1P3-201ENST00000403408 F5H6K3 240 aa14.32□□□□□ -0.12
SPTLC1P3-201ENST00000403408 ATP2A1O14983 1001 aa14.32□□□□□ -0.12
SPTLC1P3-201ENST00000403408 FGBP02675 491 aa14.32□□□□□ -0.12
SPTLC1P3-201ENST00000403408 COPB2P35606 906 aa14.32□□□□□ -0.12
SPTLC1P3-201ENST00000403408 KLRC3Q07444 240 aa14.32□□□□□ -0.12
SPTLC1P3-201ENST00000403408 SIRT2Q8IXJ6 389 aa14.32□□□□□ -0.12
SPTLC1P3-201ENST00000403408 CCDC144CPQ8IYA2 1237 aa14.32□□□□□ -0.12
SPTLC1P3-201ENST00000403408 MICALL1Q8N3F8 863 aa14.32□□□□□ -0.12
SPTLC1P3-201ENST00000403408 PCSK9Q8NBP7 692 aaKnown RBP14.32□□□□□ -0.12
SPTLC1P3-201ENST00000403408 PUS7LQ9H0K6 701 aaKnown RBP14.32□□□□□ -0.12
SPTLC1P3-201ENST00000403408 BOLA2Q9H3K6 86 aa14.32□□□□□ -0.12
SPTLC1P3-201ENST00000403408 ABHD16BQ9H3Z7 469 aa14.32□□□□□ -0.12
SPTLC1P3-201ENST00000403408 GOPCQ9HD26 462 aa14.32□□□□□ -0.12
SPTLC1P3-201ENST00000403408 GNEQ9Y223 722 aaKnown RBP14.32□□□□□ -0.12
SPTLC1P3-201ENST00000403408 LCTP09848 1927 aa14.32□□□□□ -0.12
SPTLC1P3-201ENST00000403408 MYH4Q9Y623 1939 aa14.32□□□□□ -0.12
SPTLC1P3-201ENST00000403408 SOWAHBA6NEL2 793 aa14.31□□□□□ -0.12
SPTLC1P3-201ENST00000403408 APBB1O00213 710 aa14.31□□□□□ -0.12
SPTLC1P3-201ENST00000403408 SPRED2Q7Z698 418 aa14.31□□□□□ -0.12
SPTLC1P3-201ENST00000403408 ERC1Q8IUD2 1116 aa14.31□□□□□ -0.12
SPTLC1P3-201ENST00000403408 STK11IPQ8N1F8 1099 aa14.31□□□□□ -0.12
SPTLC1P3-201ENST00000403408 SCLYQ96I15 445 aa14.31□□□□□ -0.12
SPTLC1P3-201ENST00000403408 AGBL1Q96MI9 1066 aa14.31□□□□□ -0.12
SPTLC1P3-201ENST00000403408 LRFN3Q9BTN0 628 aa14.31□□□□□ -0.12
SPTLC1P3-201ENST00000403408 HIPK3Q9H422 1215 aa14.31□□□□□ -0.12
SPTLC1P3-201ENST00000403408 SLC28A3Q9HAS3 691 aa14.31□□□□□ -0.12
SPTLC1P3-201ENST00000403408 SLC38A10Q9HBR0 1119 aa14.31□□□□□ -0.12
SPTLC1P3-201ENST00000403408 C11orf16Q9NQ32 467 aa14.31□□□□□ -0.12
SPTLC1P3-201ENST00000403408 PAG1Q9NWQ8 432 aa14.31□□□□□ -0.12
SPTLC1P3-201ENST00000403408 B4GALT4O60513 344 aa14.3□□□□□ -0.12
SPTLC1P3-201ENST00000403408 PSMC6P62333 389 aa14.3□□□□□ -0.12
SPTLC1P3-201ENST00000403408 TTLL4Q14679 1199 aa14.3□□□□□ -0.12
SPTLC1P3-201ENST00000403408 CCDC174Q6PII3 467 aa14.3□□□□□ -0.12
SPTLC1P3-201ENST00000403408 FAM133AQ8N9E0 248 aa14.3□□□□□ -0.12
SPTLC1P3-201ENST00000403408 PRPF38AQ8NAV1 312 aaKnown RBP14.3□□□□□ -0.12
SPTLC1P3-201ENST00000403408 PDGFCQ9NRA1 345 aa14.3□□□□□ -0.12
SPTLC1P3-201ENST00000403408 NYAP2Q9P242 653 aa14.3□□□□□ -0.12
SPTLC1P3-201ENST00000403408 MTCH2Q9Y6C9 303 aa14.3□□□□□ -0.12
SPTLC1P3-201ENST00000403408 SLC4A4Q9Y6R1 1079 aa14.3□□□□□ -0.12
SPTLC1P3-201ENST00000403408 TLR3O15455 904 aaKnown RBP14.29□□□□□ -0.12
SPTLC1P3-201ENST00000403408 SMPD1P17405 629 aa14.29□□□□□ -0.12
SPTLC1P3-201ENST00000403408 ITGA7Q13683 1181 aa14.29□□□□□ -0.12
SPTLC1P3-201ENST00000403408 PANK1Q8TE04 598 aa14.29□□□□□ -0.12
SPTLC1P3-201ENST00000403408 KIFC2Q96AC6 838 aa14.29□□□□□ -0.12
SPTLC1P3-201ENST00000403408 BCL11AQ9H165 835 aa14.29□□□□□ -0.12
SPTLC1P3-201ENST00000403408 CERS4Q9HA82 394 aa14.29□□□□□ -0.12
SPTLC1P3-201ENST00000403408 ZNF536O15090 1300 aa14.29□□□□□ -0.12
SPTLC1P3-201ENST00000403408 GSG1L2A8MUP6 293 aa14.28□□□□□ -0.12
SPTLC1P3-201ENST00000403408 ERC2O15083 957 aa14.28□□□□□ -0.12
SPTLC1P3-201ENST00000403408 TLL1O43897 1013 aa14.28□□□□□ -0.12
SPTLC1P3-201ENST00000403408 POU3F3P20264 500 aaPredicted RBP14.28□□□□□ -0.12
SPTLC1P3-201ENST00000403408 TNFAIP2Q03169 654 aa14.28□□□□□ -0.12
SPTLC1P3-201ENST00000403408 PTPRSQ13332 1948 aa14.28□□□□□ -0.12
SPTLC1P3-201ENST00000403408 PPP2R2DQ66LE6 453 aa14.28□□□□□ -0.12
SPTLC1P3-201ENST00000403408 TAPT1Q6NXT6 567 aa14.28□□□□□ -0.12
SPTLC1P3-201ENST00000403408 FTSJ3Q8IY81 847 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms