RNA–Protein interactions for RNA: ENST00000402550.5

CGREF1-204, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 2 BASIC

Gene CGREF1, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-204ENST00000402550 TRIM22Q8IYM9 498 aa31.11■■■□□ 2.57
CGREF1-204ENST00000402550 CCDC82Q8N4S0 544 aa31.11■■■□□ 2.57
CGREF1-204ENST00000402550 GPRC5AQ8NFJ5 357 aa31.11■■■□□ 2.57
CGREF1-204ENST00000402550 SLC38A10Q9HBR0 1119 aa31.11■■■□□ 2.57
CGREF1-204ENST00000402550 ERVK-9P63128 1117 aa31.1■■■□□ 2.57
CGREF1-204ENST00000402550 ERVK-24P63145 666 aa31.1■■■□□ 2.57
CGREF1-204ENST00000402550 SP3Q02447 781 aa31.1■■■□□ 2.57
CGREF1-204ENST00000402550 ST3GAL1Q11201 340 aa31.1■■■□□ 2.57
CGREF1-204ENST00000402550 CMTR1Q8N1G2 835 aaKnown RBP31.1■■■□□ 2.57
CGREF1-204ENST00000402550 SRBD1Q8N5C6 995 aaKnown RBP31.1■■■□□ 2.57
CGREF1-204ENST00000402550 REPS2Q8NFH8 660 aa31.1■■■□□ 2.57
CGREF1-204ENST00000402550 ZBED4O75132 1171 aa31.09■■■□□ 2.57
CGREF1-204ENST00000402550 AKAP17AQ02040 695 aaKnown RBP31.09■■■□□ 2.57
CGREF1-204ENST00000402550 TMEM132BQ14DG7 1078 aa31.09■■■□□ 2.57
CGREF1-204ENST00000402550 NTRK3Q16288 839 aa31.09■■■□□ 2.57
CGREF1-204ENST00000402550 NBPF11Q86T75 865 aa31.09■■■□□ 2.57
CGREF1-204ENST00000402550 ADGRF4Q8IZF3 695 aa31.09■■■□□ 2.57
CGREF1-204ENST00000402550 INTS4Q96HW7 963 aaKnown RBP31.09■■■□□ 2.57
CGREF1-204ENST00000402550 SPZ1Q9BXG8 430 aa31.09■■■□□ 2.57
CGREF1-204ENST00000402550 COL11A1P12107 1806 aaPredicted RBP31.09■■■□□ 2.57
CGREF1-204ENST00000402550 ZNF296Q8WUU4 475 aaPredicted RBP31.09■■■□□ 2.57
CGREF1-204ENST00000402550 ZNF214Q9UL59 606 aaPredicted RBP31.09■■■□□ 2.57
CGREF1-204ENST00000402550 A0A0G2JMZ2 1700 aa31.08■■■□□ 2.57
CGREF1-204ENST00000402550 HSPA8P11142 646 aaKnown RBP31.08■■■□□ 2.57
CGREF1-204ENST00000402550 CTCFP49711 727 aaPredicted RBP31.08■■■□□ 2.57
CGREF1-204ENST00000402550 SNAP25P60880 206 aa31.08■■■□□ 2.57
CGREF1-204ENST00000402550 SSRP1Q08945 709 aaKnown RBP31.08■■■□□ 2.57
CGREF1-204ENST00000402550 SLC35G1Q2M3R5 365 aa31.08■■■□□ 2.57
CGREF1-204ENST00000402550 VAT1LQ9HCJ6 419 aa31.08■■■□□ 2.57
CGREF1-204ENST00000402550 RBM27Q9P2N5 1060 aaKnown RBP31.08■■■□□ 2.57
CGREF1-204ENST00000402550 NSUN7Q8NE18 718 aaKnown RBP31.07■■■□□ 2.56
CGREF1-204ENST00000402550 PHKBQ93100 1093 aa31.07■■■□□ 2.56
CGREF1-204ENST00000402550 RANBP17Q9H2T7 1088 aaKnown RBP31.07■■■□□ 2.56
CGREF1-204ENST00000402550 JMJD4Q9H9V9 463 aa31.07■■■□□ 2.56
CGREF1-204ENST00000402550 CTDP1Q9Y5B0 961 aaPredicted RBP31.07■■■□□ 2.56
CGREF1-204ENST00000402550 CYTH3O43739 400 aa31.06■■■□□ 2.56
CGREF1-204ENST00000402550 FKTNO75072 461 aa31.06■■■□□ 2.56
CGREF1-204ENST00000402550 HMGN5P82970 282 aaKnown RBP31.06■■■□□ 2.56
CGREF1-204ENST00000402550 PLS1Q14651 629 aa31.06■■■□□ 2.56
CGREF1-204ENST00000402550 CPXCR1Q8N123 301 aa31.06■■■□□ 2.56
CGREF1-204ENST00000402550 SLC26A6Q9BXS9 759 aa31.06■■■□□ 2.56
CGREF1-204ENST00000402550 RNF26Q9BY78 433 aaPredicted RBP31.06■■■□□ 2.56
CGREF1-204ENST00000402550 SPATC1LQ9H0A9 340 aa31.06■■■□□ 2.56
CGREF1-204ENST00000402550 RIOX1Q9H6W3 641 aa31.06■■■□□ 2.56
CGREF1-204ENST00000402550 SMC3Q9UQE7 1217 aa31.06■■■□□ 2.56
CGREF1-204ENST00000402550 CNTNAP5Q8WYK1 1306 aa31.06■■■□□ 2.56
CGREF1-204ENST00000402550 PTPDC1A2A3K4 754 aa31.05■■■□□ 2.56
CGREF1-204ENST00000402550 ATP2A1O14983 1001 aa31.05■■■□□ 2.56
CGREF1-204ENST00000402550 CTDNEP1O95476 244 aa31.05■■■□□ 2.56
CGREF1-204ENST00000402550 RRP36Q96EU6 259 aaKnown RBP31.05■■■□□ 2.56
CGREF1-204ENST00000402550 SEC63Q9UGP8 760 aaKnown RBP31.05■■■□□ 2.56
CGREF1-204ENST00000402550 FMNL1O95466 1100 aaPredicted RBP31.05■■■□□ 2.56
CGREF1-204ENST00000402550 STAT3P40763 770 aa31.05■■■□□ 2.56
CGREF1-204ENST00000402550 LBX1P52954 281 aa31.05■■■□□ 2.56
CGREF1-204ENST00000402550 LACTBP83111 547 aaPredicted RBP31.05■■■□□ 2.56
CGREF1-204ENST00000402550 FUT2Q10981 343 aa31.05■■■□□ 2.56
CGREF1-204ENST00000402550 RAVER2Q9HCJ3 691 aaKnown RBP31.05■■■□□ 2.56
CGREF1-204ENST00000402550 KIF3AQ9Y496 699 aa31.05■■■□□ 2.56
CGREF1-204ENST00000402550 ZNF536O15090 1300 aa31.04■■■□□ 2.56
CGREF1-204ENST00000402550 OAZ1P54368 228 aa31.04■■■□□ 2.56
CGREF1-204ENST00000402550 MOV10L1Q9BXT6 1211 aaKnown RBP31.04■■■□□ 2.56
CGREF1-204ENST00000402550 V9GY48 417 aaPredicted RBP31.04■■■□□ 2.56
CGREF1-204ENST00000402550 STK36Q9NRP7 1315 aa31.03■■■□□ 2.56
CGREF1-204ENST00000402550 PRPF3O43395 683 aaKnown RBP31.03■■■□□ 2.56
CGREF1-204ENST00000402550 PPFIA3O75145 1194 aa31.03■■■□□ 2.56
CGREF1-204ENST00000402550 CCNA1P78396 465 aa31.03■■■□□ 2.56
CGREF1-204ENST00000402550 CCDC174Q6PII3 467 aa31.03■■■□□ 2.56
CGREF1-204ENST00000402550 HOMER1Q86YM7 354 aa31.03■■■□□ 2.56
CGREF1-204ENST00000402550 SMARCC2Q8TAQ2 1214 aa31.03■■■□□ 2.56
CGREF1-204ENST00000402550 MTMR8Q96EF0 704 aa31.03■■■□□ 2.56
CGREF1-204ENST00000402550 DDX11Q96FC9 970 aa31.03■■■□□ 2.56
CGREF1-204ENST00000402550 TEX13BQ9BXU2 312 aa31.03■■■□□ 2.56
CGREF1-204ENST00000402550 PORCNQ9H237 461 aa31.03■■■□□ 2.56
CGREF1-204ENST00000402550 FOXD4L1Q9NU39 408 aa31.03■■■□□ 2.56
CGREF1-204ENST00000402550 ORC3Q9UBD5 711 aaPredicted RBP31.03■■■□□ 2.56
CGREF1-204ENST00000402550 JAK2O60674 1132 aa31.02■■■□□ 2.56
CGREF1-204ENST00000402550 FAM184AQ8NB25 1140 aa31.02■■■□□ 2.56
CGREF1-204ENST00000402550 SPRYD3Q8NCJ5 442 aa31.02■■■□□ 2.56
CGREF1-204ENST00000402550 PIBF1Q8WXW3 757 aa31.02■■■□□ 2.56
CGREF1-204ENST00000402550 WASF1Q92558 559 aa31.02■■■□□ 2.56
CGREF1-204ENST00000402550 DEXIO95424 95 aa31.01■■■□□ 2.56
CGREF1-204ENST00000402550 CTGFP29279 349 aa31.01■■■□□ 2.56
CGREF1-204ENST00000402550 SLC4A3P48751 1232 aa31.01■■■□□ 2.56
CGREF1-204ENST00000402550 SNRNP48Q6IEG0 339 aaKnown RBP31.01■■■□□ 2.56
CGREF1-204ENST00000402550 RIOX2Q8IUF8 465 aa31.01■■■□□ 2.56
CGREF1-204ENST00000402550 AGBL1Q96MI9 1066 aa31.01■■■□□ 2.56
CGREF1-204ENST00000402550 IPO9Q96P70 1041 aaKnown RBP31.01■■■□□ 2.56
CGREF1-204ENST00000402550 RIPK3Q9Y572 518 aa31.01■■■□□ 2.56
CGREF1-204ENST00000402550 CASP8AP2Q9UKL3 1982 aa31.01■■■□□ 2.55
CGREF1-204ENST00000402550 ECM2O94769 699 aaPredicted RBP31■■■□□ 2.55
CGREF1-204ENST00000402550 CAP1Q01518 475 aa31■■■□□ 2.55
CGREF1-204ENST00000402550 CDC37Q16543 378 aaPredicted RBP31■■■□□ 2.55
CGREF1-204ENST00000402550 PIGSQ96S52 555 aa31■■■□□ 2.55
CGREF1-204ENST00000402550 EFCC1Q9HA90 598 aa31■■■□□ 2.55
CGREF1-204ENST00000402550 ZBTB5O15062 677 aa31■■■□□ 2.55
CGREF1-204ENST00000402550 ICAM1P05362 532 aa31■■■□□ 2.55
CGREF1-204ENST00000402550 KIF22Q14807 665 aa31■■■□□ 2.55
CGREF1-204ENST00000402550 CD99L2Q8TCZ2 262 aa31■■■□□ 2.55
CGREF1-204ENST00000402550 ERO1AQ96HE7 468 aa31■■■□□ 2.55
CGREF1-204ENST00000402550 ARHGAP39Q9C0H5 1083 aa31■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms