RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 DPF3Q92784 378 aa9.88□□□□□ -0.83
USP16-202ENST00000399973 PAWRQ96IZ0 340 aaKnown RBP9.88□□□□□ -0.83
USP16-202ENST00000399973 AGBL1Q96MI9 1066 aa9.88□□□□□ -0.83
USP16-202ENST00000399973 ZSCAN10Q96SZ4 725 aaPredicted RBP9.88□□□□□ -0.83
USP16-202ENST00000399973 HTATIP2Q9BUP3 242 aa9.88□□□□□ -0.83
USP16-202ENST00000399973 CRISPLD2Q9H0B8 497 aa9.88□□□□□ -0.83
USP16-202ENST00000399973 FBXO40Q9UH90 709 aa9.88□□□□□ -0.83
USP16-202ENST00000399973 CCPG1Q9ULG6 757 aa9.88□□□□□ -0.83
USP16-202ENST00000399973 ATP2A1O14983 1001 aa9.87□□□□□ -0.83
USP16-202ENST00000399973 CENPBP07199 599 aaPredicted RBP9.87□□□□□ -0.83
USP16-202ENST00000399973 CYP21A2P08686 494 aa9.87□□□□□ -0.83
USP16-202ENST00000399973 FDX1P10109 184 aa9.87□□□□□ -0.83
USP16-202ENST00000399973 CYBAP13498 195 aa9.87□□□□□ -0.83
USP16-202ENST00000399973 NOVP48745 357 aa9.87□□□□□ -0.83
USP16-202ENST00000399973 CCDC178Q5BJE1 867 aa9.87□□□□□ -0.83
USP16-202ENST00000399973 BMP2KLQ5H9B9 411 aa9.87□□□□□ -0.83
USP16-202ENST00000399973 ENAHQ8N8S7 591 aaPredicted RBP9.87□□□□□ -0.83
USP16-202ENST00000399973 TRPV1Q8NER1 839 aa9.87□□□□□ -0.83
USP16-202ENST00000399973 TTC14Q96N46 770 aa9.87□□□□□ -0.83
USP16-202ENST00000399973 ESYT1Q9BSJ8 1104 aa9.87□□□□□ -0.83
USP16-202ENST00000399973 ACAD9Q9H845 621 aa9.87□□□□□ -0.83
USP16-202ENST00000399973 ANO2Q9NQ90 1003 aa9.87□□□□□ -0.83
USP16-202ENST00000399973 ZSWIM5Q9P217 1185 aa9.87□□□□□ -0.83
USP16-202ENST00000399973 DDX20Q9UHI6 824 aaKnown RBP9.87□□□□□ -0.83
USP16-202ENST00000399973 RBM8AQ9Y5S9 174 aaKnown RBP9.87□□□□□ -0.83
USP16-202ENST00000399973 TAF6LQ9Y6J9 622 aa9.87□□□□□ -0.83
USP16-202ENST00000399973 ZNF536O15090 1300 aa9.86□□□□□ -0.83
USP16-202ENST00000399973 ERICH2A1L162 156 aa9.86□□□□□ -0.83
USP16-202ENST00000399973 CDC45O75419 566 aa9.86□□□□□ -0.83
USP16-202ENST00000399973 NT5C2P49902 561 aa9.86□□□□□ -0.83
USP16-202ENST00000399973 ZNF543Q08ER8 600 aa9.86□□□□□ -0.83
USP16-202ENST00000399973 ZNF792Q3KQV3 632 aa9.86□□□□□ -0.83
USP16-202ENST00000399973 PRAMEF19Q5SWL8 479 aa9.86□□□□□ -0.83
USP16-202ENST00000399973 IFIT1BQ5T764 474 aaKnown RBP9.86□□□□□ -0.83
USP16-202ENST00000399973 CASC1Q6TDU7 716 aa9.86□□□□□ -0.83
USP16-202ENST00000399973 NSMFQ6X4W1 530 aa9.86□□□□□ -0.83
USP16-202ENST00000399973 CYB5R4Q7L1T6 521 aa9.86□□□□□ -0.83
USP16-202ENST00000399973 NECAB2Q7Z6G3 386 aa9.86□□□□□ -0.83
USP16-202ENST00000399973 DGKHQ86XP1 1220 aa9.86□□□□□ -0.83
USP16-202ENST00000399973 ANKLE1Q8NAG6 615 aa9.86□□□□□ -0.83
USP16-202ENST00000399973 CHST13Q8NET6 341 aa9.86□□□□□ -0.83
USP16-202ENST00000399973 TRERF1Q96PN7 1200 aa9.86□□□□□ -0.83
USP16-202ENST00000399973 TINF2Q9BSI4 451 aa9.86□□□□□ -0.83
USP16-202ENST00000399973 RANBP17Q9H2T7 1088 aaKnown RBP9.86□□□□□ -0.83
USP16-202ENST00000399973 CPVLQ9H3G5 476 aa9.86□□□□□ -0.83
USP16-202ENST00000399973 C11orf49Q9H6J7 331 aa9.86□□□□□ -0.83
USP16-202ENST00000399973 ZHX1Q9UKY1 873 aaPredicted RBP9.86□□□□□ -0.83
USP16-202ENST00000399973 OGDHLQ9ULD0 1010 aa9.86□□□□□ -0.83
USP16-202ENST00000399973 CNPY2Q9Y2B0 182 aa9.86□□□□□ -0.83
USP16-202ENST00000399973 E7EWF7 191 aa9.85□□□□□ -0.83
USP16-202ENST00000399973 POTEB2H3BUK9 544 aa9.85□□□□□ -0.83
USP16-202ENST00000399973 MSCO60682 206 aa9.85□□□□□ -0.83
USP16-202ENST00000399973 PLA2G6O60733 806 aa9.85□□□□□ -0.83
USP16-202ENST00000399973 ICAM1P05362 532 aa9.85□□□□□ -0.83
USP16-202ENST00000399973 USH1GQ495M9 461 aa9.85□□□□□ -0.83
USP16-202ENST00000399973 MUM1L1Q5H9M0 696 aa9.85□□□□□ -0.83
USP16-202ENST00000399973 GPATCH4Q5T3I0 446 aaKnown RBP9.85□□□□□ -0.83
USP16-202ENST00000399973 STOX1Q6ZVD7 989 aa9.85□□□□□ -0.83
USP16-202ENST00000399973 CHST3Q7LGC8 479 aa9.85□□□□□ -0.83
USP16-202ENST00000399973 UBE2Q1Q7Z7E8 422 aa9.85□□□□□ -0.83
USP16-202ENST00000399973 NCOA7Q8NI08 942 aa9.85□□□□□ -0.83
USP16-202ENST00000399973 A1CFQ9NQ94 594 aaKnown RBP9.85□□□□□ -0.83
USP16-202ENST00000399973 CEP290O15078 2479 aa9.85□□□□□ -0.83
USP16-202ENST00000399973 PFASO15067 1338 aa9.84□□□□□ -0.83
USP16-202ENST00000399973 IFIT3O14879 490 aaKnown RBP9.84□□□□□ -0.83
USP16-202ENST00000399973 SEPT4O43236 478 aa9.84□□□□□ -0.83
USP16-202ENST00000399973 EVI5O60447 810 aa9.84□□□□□ -0.83
USP16-202ENST00000399973 PARP1P09874 1014 aaKnown RBP9.84□□□□□ -0.83
USP16-202ENST00000399973 SNHG28P0DPA3 235 aa9.84□□□□□ -0.83
USP16-202ENST00000399973 CAPN2P17655 700 aa9.84□□□□□ -0.83
USP16-202ENST00000399973 CNTN2Q02246 1040 aa9.84□□□□□ -0.83
USP16-202ENST00000399973 SART3Q15020 963 aaKnown RBP9.84□□□□□ -0.83
USP16-202ENST00000399973 CDC37Q16543 378 aaPredicted RBP9.84□□□□□ -0.83
USP16-202ENST00000399973 TKFCQ3LXA3 575 aa9.84□□□□□ -0.83
USP16-202ENST00000399973 ASPRV1Q53RT3 343 aa9.84□□□□□ -0.83
USP16-202ENST00000399973 TMEM67Q5HYA8 995 aa9.84□□□□□ -0.83
USP16-202ENST00000399973 LHX8Q68G74 356 aa9.84□□□□□ -0.83
USP16-202ENST00000399973 BTNL9Q6UXG8 535 aa9.84□□□□□ -0.83
USP16-202ENST00000399973 C7orf61Q8IZ16 206 aa9.84□□□□□ -0.83
USP16-202ENST00000399973 MAP4K1Q92918 833 aa9.84□□□□□ -0.83
USP16-202ENST00000399973 LENG1Q96BZ8 264 aaPredicted RBP9.84□□□□□ -0.83
USP16-202ENST00000399973 UBA5Q9GZZ9 404 aa9.84□□□□□ -0.83
USP16-202ENST00000399973 LSG1Q9H089 658 aaKnown RBP9.84□□□□□ -0.83
USP16-202ENST00000399973 DIS3Q9Y2L1 958 aaKnown RBP9.84□□□□□ -0.83
USP16-202ENST00000399973 MKI67P46013 3256 aaKnown RBP9.84□□□□□ -0.83
USP16-202ENST00000399973 DNAJC25-GNG10A0A024R161 153 aa9.83□□□□□ -0.84
USP16-202ENST00000399973 PTPDC1A2A3K4 754 aa9.83□□□□□ -0.84
USP16-202ENST00000399973 KBTBD13C9JR72 458 aa9.83□□□□□ -0.84
USP16-202ENST00000399973 H0YGN5 161 aa9.83□□□□□ -0.84
USP16-202ENST00000399973 NFIBO00712 420 aa9.83□□□□□ -0.84
USP16-202ENST00000399973 SLC27A2O14975 620 aa9.83□□□□□ -0.84
USP16-202ENST00000399973 RARBP10826 455 aa9.83□□□□□ -0.84
USP16-202ENST00000399973 WTAPQ15007 396 aa9.83□□□□□ -0.84
USP16-202ENST00000399973 SEC23AQ15436 765 aa9.83□□□□□ -0.84
USP16-202ENST00000399973 GJC2Q5T442 439 aaPredicted RBP9.83□□□□□ -0.84
USP16-202ENST00000399973 SLC30A10Q6XR72 485 aa9.83□□□□□ -0.84
USP16-202ENST00000399973 ARMCX2Q7L311 632 aa9.83□□□□□ -0.84
USP16-202ENST00000399973 VAT1LQ9HCJ6 419 aa9.83□□□□□ -0.84
USP16-202ENST00000399973 XPNPEP3Q9NQH7 507 aa9.83□□□□□ -0.84
USP16-202ENST00000399973 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms