RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 PIK3CAP42336 1068 aa12.03□□□□□ -0.48
CACNA1C-216ENST00000399638 HERC4Q5GLZ8 1057 aaPredicted RBP12.03□□□□□ -0.48
CACNA1C-216ENST00000399638 TAOK1Q7L7X3 1001 aa12.03□□□□□ -0.48
CACNA1C-216ENST00000399638 RNF139Q8WU17 664 aa12.03□□□□□ -0.48
CACNA1C-216ENST00000399638 UBLCP1Q8WVY7 318 aaPredicted RBP12.03□□□□□ -0.48
CACNA1C-216ENST00000399638 TTC14Q96N46 770 aa12.03□□□□□ -0.48
CACNA1C-216ENST00000399638 NOC4LQ9BVI4 516 aaKnown RBP12.03□□□□□ -0.48
CACNA1C-216ENST00000399638 URB2Q14146 1524 aaKnown RBP12.03□□□□□ -0.48
CACNA1C-216ENST00000399638 TMEM259Q4ZIN3 620 aa12.03□□□□□ -0.48
CACNA1C-216ENST00000399638 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.03□□□□□ -0.48
CACNA1C-216ENST00000399638 DMTNQ08495 405 aa12.03□□□□□ -0.48
CACNA1C-216ENST00000399638 FAM117BQ6P1L5 589 aa12.03□□□□□ -0.48
CACNA1C-216ENST00000399638 MRPS27Q92552 414 aaKnown RBP12.03□□□□□ -0.48
CACNA1C-216ENST00000399638 KIAA0556O60303 1618 aa12.03□□□□□ -0.48
CACNA1C-216ENST00000399638 GOLGA8FQ08AF8 430 aa12.02□□□□□ -0.48
CACNA1C-216ENST00000399638 GOLGA8DPQ0D2H9 430 aa12.02□□□□□ -0.48
CACNA1C-216ENST00000399638 CLEC17AQ6ZS10 378 aa12.02□□□□□ -0.48
CACNA1C-216ENST00000399638 ANKRD36BP1Q96IX9 119 aa12.02□□□□□ -0.48
CACNA1C-216ENST00000399638 SYNMO15061 1565 aa12.02□□□□□ -0.48
CACNA1C-216ENST00000399638 UPP2O95045 317 aa12.02□□□□□ -0.48
CACNA1C-216ENST00000399638 ZNF653Q96CK0 615 aa12.02□□□□□ -0.48
CACNA1C-216ENST00000399638 SRGAP2BP0DMP2 458 aa12.02□□□□□ -0.49
CACNA1C-216ENST00000399638 DLATP10515 647 aaKnown RBP12.02□□□□□ -0.49
CACNA1C-216ENST00000399638 RBBP5Q15291 538 aaKnown RBP12.02□□□□□ -0.49
CACNA1C-216ENST00000399638 ANKS4BQ8N8V4 417 aa12.02□□□□□ -0.49
CACNA1C-216ENST00000399638 TTC1Q99614 292 aa12.02□□□□□ -0.49
CACNA1C-216ENST00000399638 MAGED2Q9UNF1 606 aaPredicted RBP12.02□□□□□ -0.49
CACNA1C-216ENST00000399638 IVLP07476 585 aa12.02□□□□□ -0.49
CACNA1C-216ENST00000399638 MCM6Q14566 821 aa12.02□□□□□ -0.49
CACNA1C-216ENST00000399638 TMCO5AQ8N6Q1 288 aa12.02□□□□□ -0.49
CACNA1C-216ENST00000399638 NACC1Q96RE7 527 aa12.02□□□□□ -0.49
CACNA1C-216ENST00000399638 DCTPP1Q9H773 170 aa12.02□□□□□ -0.49
CACNA1C-216ENST00000399638 TPX2Q9ULW0 747 aaKnown RBP12.02□□□□□ -0.49
CACNA1C-216ENST00000399638 CETN3O15182 167 aa12.02□□□□□ -0.49
CACNA1C-216ENST00000399638 IGSF3O75054 1194 aa12.02□□□□□ -0.49
CACNA1C-216ENST00000399638 GDF11O95390 407 aa12.02□□□□□ -0.49
CACNA1C-216ENST00000399638 NNMTP40261 264 aa12.02□□□□□ -0.49
CACNA1C-216ENST00000399638 NONOQ15233 471 aaKnown RBP eCLIP12.02□□□□□ -0.49
CACNA1C-216ENST00000399638 TBCCQ15814 346 aa12.02□□□□□ -0.49
CACNA1C-216ENST00000399638 KRT26Q7Z3Y9 468 aa12.02□□□□□ -0.49
CACNA1C-216ENST00000399638 RSAD2Q8WXG1 361 aa12.02□□□□□ -0.49
CACNA1C-216ENST00000399638 COPRSQ9NQ92 184 aa12.02□□□□□ -0.49
CACNA1C-216ENST00000399638 A2MP01023 1474 aa12.02□□□□□ -0.49
CACNA1C-216ENST00000399638 ZFYVE9O95405 1425 aa12.02□□□□□ -0.49
CACNA1C-216ENST00000399638 TUBBP07437 444 aa12.02□□□□□ -0.49
CACNA1C-216ENST00000399638 NFKBIAP25963 317 aa12.02□□□□□ -0.49
CACNA1C-216ENST00000399638 NEDD9Q14511 834 aa12.02□□□□□ -0.49
CACNA1C-216ENST00000399638 PDZD8Q8NEN9 1154 aa12.02□□□□□ -0.49
CACNA1C-216ENST00000399638 BCRP11274 1271 aa12.01□□□□□ -0.49
CACNA1C-216ENST00000399638 PLA2G4DQ86XP0 818 aa12.01□□□□□ -0.49
CACNA1C-216ENST00000399638 PPP4R1Q8TF05 950 aa12.01□□□□□ -0.49
CACNA1C-216ENST00000399638 SLC52A2Q9HAB3 445 aa12.01□□□□□ -0.49
CACNA1C-216ENST00000399638 DYRK4Q9NR20 520 aa12.01□□□□□ -0.49
CACNA1C-216ENST00000399638 FRMD3A2A2Y4 597 aa12.01□□□□□ -0.49
CACNA1C-216ENST00000399638 RAP1GDS1P52306 607 aa12.01□□□□□ -0.49
CACNA1C-216ENST00000399638 ACCSLQ4AC99 568 aa12.01□□□□□ -0.49
CACNA1C-216ENST00000399638 IQUBQ8NA54 791 aa12.01□□□□□ -0.49
CACNA1C-216ENST00000399638 SPDL1Q96EA4 605 aa12.01□□□□□ -0.49
CACNA1C-216ENST00000399638 ESYT1Q9BSJ8 1104 aa12.01□□□□□ -0.49
CACNA1C-216ENST00000399638 RBSNQ9H1K0 784 aa12.01□□□□□ -0.49
CACNA1C-216ENST00000399638 DACT1Q9NYF0 836 aa12.01□□□□□ -0.49
CACNA1C-216ENST00000399638 LRWD1Q9UFC0 647 aa12.01□□□□□ -0.49
CACNA1C-216ENST00000399638 KRT83P78385 493 aa12.01□□□□□ -0.49
CACNA1C-216ENST00000399638 LACTBP83111 547 aaPredicted RBP12.01□□□□□ -0.49
CACNA1C-216ENST00000399638 NXNQ6DKJ4 435 aa12.01□□□□□ -0.49
CACNA1C-216ENST00000399638 DDX53Q86TM3 631 aaKnown RBP12.01□□□□□ -0.49
CACNA1C-216ENST00000399638 THEM5Q8N1Q8 247 aa12.01□□□□□ -0.49
CACNA1C-216ENST00000399638 UBL4BQ8N7F7 174 aa12.01□□□□□ -0.49
CACNA1C-216ENST00000399638 VPS18Q9P253 973 aa12.01□□□□□ -0.49
CACNA1C-216ENST00000399638 SKILP12757 684 aa12.01□□□□□ -0.49
CACNA1C-216ENST00000399638 ATP8B2P98198 1209 aa12.01□□□□□ -0.49
CACNA1C-216ENST00000399638 IQCB1Q15051 598 aa12.01□□□□□ -0.49
CACNA1C-216ENST00000399638 PI4K2BQ8TCG2 481 aa12.01□□□□□ -0.49
CACNA1C-216ENST00000399638 ABCC1P33527 1531 aa12.01□□□□□ -0.49
CACNA1C-216ENST00000399638 A6NJR5 290 aa12.01□□□□□ -0.49
CACNA1C-216ENST00000399638 TNPO2O14787 897 aaKnown RBP12.01□□□□□ -0.49
CACNA1C-216ENST00000399638 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.01□□□□□ -0.49
CACNA1C-216ENST00000399638 KRT25Q7Z3Z0 450 aa12.01□□□□□ -0.49
CACNA1C-216ENST00000399638 NDUFAF2Q8N183 169 aa12.01□□□□□ -0.49
CACNA1C-216ENST00000399638 CDC26Q8NHZ8 85 aa12.01□□□□□ -0.49
CACNA1C-216ENST00000399638 LMBRD1Q9NUN5 540 aa12.01□□□□□ -0.49
CACNA1C-216ENST00000399638 CTTNBP2NLQ9P2B4 639 aa12.01□□□□□ -0.49
CACNA1C-216ENST00000399638 POLR1AO95602 1720 aaPredicted RBP12□□□□□ -0.49
CACNA1C-216ENST00000399638 GYG1P46976 350 aa12□□□□□ -0.49
CACNA1C-216ENST00000399638 SLC12A1Q13621 1099 aa12□□□□□ -0.49
CACNA1C-216ENST00000399638 LZTS2Q9BRK4 669 aa12□□□□□ -0.49
CACNA1C-216ENST00000399638 PSTPIP2Q9H939 334 aa12□□□□□ -0.49
CACNA1C-216ENST00000399638 TPCN1Q9ULQ1 816 aa12□□□□□ -0.49
CACNA1C-216ENST00000399638 RNF8O76064 485 aa12□□□□□ -0.49
CACNA1C-216ENST00000399638 MMP10P09238 476 aa12□□□□□ -0.49
CACNA1C-216ENST00000399638 CCDC186Q7Z3E2 898 aa12□□□□□ -0.49
CACNA1C-216ENST00000399638 SZRD1Q7Z422 152 aa12□□□□□ -0.49
CACNA1C-216ENST00000399638 ATP6V1E2Q96A05 226 aa12□□□□□ -0.49
CACNA1C-216ENST00000399638 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12□□□□□ -0.49
CACNA1C-216ENST00000399638 RTL1A6NKG5 1358 aa12□□□□□ -0.49
CACNA1C-216ENST00000399638 SLFN13Q68D06 897 aa12□□□□□ -0.49
CACNA1C-216ENST00000399638 EYA1Q99502 592 aa12□□□□□ -0.49
CACNA1C-216ENST00000399638 MAPK8IP1Q9UQF2 711 aa12□□□□□ -0.49
CACNA1C-216ENST00000399638 FARP1Q9Y4F1 1045 aaPredicted RBP12□□□□□ -0.49
CACNA1C-216ENST00000399638 EYA2O00167 538 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms