RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 BOLA2-SMG1P6H3BVE0 249 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 CHMLP26374 656 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 ATP8B2P98198 1209 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 TBX2Q13207 712 aaPredicted RBP7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 RABEP1Q15276 862 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 CCDC102BQ68D86 513 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 LDHAL6AQ6ZMR3 332 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 DZIP3Q86Y13 1208 aaKnown RBP7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 DNAAF4Q8WXU2 420 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 ANAPC16Q96DE5 110 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 SPON2Q9BUD6 331 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 ADAMTS1Q9UHI8 967 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 STRIP2Q9ULQ0 834 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 TPCN1Q9ULQ1 816 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 ABCC6O95255 1503 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 TMCC2O75069 709 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 KIF22Q14807 665 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 PTPN14Q15678 1187 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 CT47A1Q5JQC4 288 aaPredicted RBP7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 NFXL1Q6ZNB6 911 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 TRIM22Q8IYM9 498 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 TEX9Q8N6V9 391 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 KCNH5Q8NCM2 988 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 SPDYE1Q8NFV5 336 aaPredicted RBP7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 RHPN1Q8TCX5 695 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 PARD3BQ8TEW8 1205 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 KBTBD4Q9NVX7 518 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 TAF6LQ9Y6J9 622 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 KIF24Q5T7B8 1368 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 COL18A1P39060 1754 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 ABHD14A-ACY1A0A1B0GW23 586 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 RCCD1A6NED2 376 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 H0Y3Z8 333 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 SMAD7O15105 426 aaKnown RBP7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 GNAI3P08754 354 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 PHKG2P15735 406 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 ZSCAN20P17040 1043 aaPredicted RBP7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 KIF5BP33176 963 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 SOX5P35711 763 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 RAD52P43351 418 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 SATB1Q01826 763 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 MFSD4BQ5TF39 518 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 KIAA0319Q5VV43 1072 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 USPL1Q5W0Q7 1092 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 HIBCHQ6NVY1 386 aaPredicted RBP7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 CYP26C1Q6V0L0 522 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 SPOCD1Q6ZMY3 1216 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 PASD1Q8IV76 773 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 IP6K1Q92551 441 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 TBATAQ96M53 351 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 BOLA2Q9H3K6 86 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 HOXC10Q9NYD6 342 aa7.1□□□□□ -1.27
TRAPPC13-202ENST00000399438 KIAA0232Q92628 1395 aa7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 SYCE3A1L190 88 aa7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 GSG1L2A8MUP6 293 aa7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 ST18O60284 1047 aa7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 TPPPO94811 219 aa7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 REC8O95072 547 aa7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 EIF4BP23588 611 aaKnown RBP7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 GPATCH4Q5T3I0 446 aaKnown RBP7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 C1orf53Q5VUE5 145 aa7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 DAAM2Q86T65 1068 aa7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 SULF1Q8IWU6 871 aa7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 TPH2Q8IWU9 490 aa7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 IQCF2Q8IXL9 164 aa7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 NECAB1Q8N987 351 aa7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 ZCCHC17Q9NP64 241 aaKnown RBP7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 FAM50BQ9Y247 325 aa7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 VIRMAQ69YN4 1812 aaKnown RBP7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 CPDO75976 1380 aa7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 IQCA1LA6NCM1 817 aa7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 GOLGA6L22H0YM25 854 aa7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 LARGE1O95461 756 aa7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 SAFBQ15424 915 aaKnown RBP eCLIP7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 HSP90B2PQ58FF3 399 aa7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 FAM173BQ6P4H8 233 aa7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 TBC1D1Q86TI0 1168 aaPredicted RBP7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 AACSQ86V21 672 aa7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 FAM169BQ8N8A8 192 aa7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 LSMEM1Q8N8F7 131 aa7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 GIMAP1Q8WWP7 306 aa7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 BAP1Q92560 729 aa7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 MTMR8Q96EF0 704 aa7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 EAF1Q96JC9 268 aaPredicted RBP7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 FAM227BQ96M60 508 aa7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 ZMAT2Q96NC0 199 aaKnown RBP7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 VPS33BQ9H267 617 aa7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 PLEKHA5Q9HAU0 1116 aa7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 KIAA1586Q9HCI6 787 aa7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 PRDM11Q9NQV5 511 aa7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 STAP2Q9UGK3 403 aa7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 IKBKGQ9Y6K9 419 aa7.09□□□□□ -1.27
TRAPPC13-202ENST00000399438 GADD45BO75293 160 aaPredicted RBP7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 CNOT4O95628 575 aaKnown RBP7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 ENPP1P22413 925 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 GALNSP34059 522 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 PTH1RQ03431 593 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 PPP2R5CQ13362 524 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 TRIM29Q14134 588 aa7.08□□□□□ -1.28
TRAPPC13-202ENST00000399438 EPHA10Q5JZY3 1008 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms