RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 LILRB3O75022 631 aa7.36□□□□□ -1.23
TM9SF4-202ENST00000398022 CDC27P30260 824 aa7.36□□□□□ -1.23
TM9SF4-202ENST00000398022 NF2P35240 595 aa7.36□□□□□ -1.23
TM9SF4-202ENST00000398022 HDAC4P56524 1084 aa7.36□□□□□ -1.23
TM9SF4-202ENST00000398022 RRP12Q5JTH9 1297 aaKnown RBP7.36□□□□□ -1.23
TM9SF4-202ENST00000398022 PRPF40BQ6NWY9 871 aaKnown RBP7.36□□□□□ -1.23
TM9SF4-202ENST00000398022 GBP7Q8N8V2 638 aaPredicted RBP7.36□□□□□ -1.23
TM9SF4-202ENST00000398022 LILRB1Q8NHL6 650 aaPredicted RBP7.36□□□□□ -1.23
TM9SF4-202ENST00000398022 MAML1Q92585 1016 aa7.36□□□□□ -1.23
TM9SF4-202ENST00000398022 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.36□□□□□ -1.231e-6■■■□□ 18.1
TM9SF4-202ENST00000398022 VCX3BQ9H321 246 aa7.36□□□□□ -1.23
TM9SF4-202ENST00000398022 TCHHQ07283 1943 aa7.36□□□□□ -1.23
TM9SF4-202ENST00000398022 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.36□□□□□ -1.23
TM9SF4-202ENST00000398022 MUSKO15146 869 aa7.36□□□□□ -1.23
TM9SF4-202ENST00000398022 ZNF189O75820 626 aaPredicted RBP7.36□□□□□ -1.23
TM9SF4-202ENST00000398022 CYP1A2P05177 515 aa7.36□□□□□ -1.23
TM9SF4-202ENST00000398022 POLR2FP61218 127 aaKnown RBP7.36□□□□□ -1.23
TM9SF4-202ENST00000398022 CTAG1AP78358 180 aa7.36□□□□□ -1.23
TM9SF4-202ENST00000398022 EPSTI1Q96J88 318 aa7.36□□□□□ -1.23
TM9SF4-202ENST00000398022 MTRQ99707 1265 aa7.36□□□□□ -1.23
TM9SF4-202ENST00000398022 SCAND2PQ9GZW5 306 aaPredicted RBP7.36□□□□□ -1.23
TM9SF4-202ENST00000398022 TCF7L2Q9NQB0 619 aa7.36□□□□□ -1.23
TM9SF4-202ENST00000398022 DISC1Q9NRI5 854 aa7.36□□□□□ -1.23
TM9SF4-202ENST00000398022 H7C1W4 665 aa7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 KRT18P05783 430 aaKnown RBP7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 NCAM1P13591 858 aa7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 HOXC9P31274 260 aa7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 USP8P40818 1118 aa7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 NLRP12P59046 1061 aa7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 DNM1Q05193 864 aaKnown RBP7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 SYCP1Q15431 976 aa7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 CDCA2Q69YH5 1023 aaPredicted RBP7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 MARCH10Q8NA82 808 aaPredicted RBP7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 IL17REQ8NFR9 667 aa7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 FAM200AQ8TCP9 573 aa7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 C1orf74Q96LT6 269 aa7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 UTP14AQ9BVJ6 771 aaKnown RBP7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 PTPRHQ9HD43 1115 aa7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 PRELID1Q9Y255 219 aa7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 PI4KAP2A4QPH2 592 aa7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 ITIH3Q06033 890 aa7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 G3BP1Q13283 466 aaKnown RBP eCLIP7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 RASEFQ8IZ41 740 aa7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 PI4KAP1Q8N8J0 262 aa7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 TSGA10Q9BZW7 698 aa7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 PHAXQ9H814 394 aaKnown RBP7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 SPTLC3Q9NUV7 552 aa7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 HYPKQ9NX55 129 aa7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 MTMR6Q9Y217 621 aa7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 ATF5Q9Y2D1 282 aaPredicted RBP7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 WDR37Q9Y2I8 494 aa7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 NOSIPQ9Y314 301 aaKnown RBP7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 USP42Q9H9J4 1324 aaKnown RBP7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 RASA4BC9J798 803 aa7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 ATF7P17544 494 aaPredicted RBP7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 HPDP32754 393 aaPredicted RBP7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 CYP2C19P33261 490 aa7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 MICALCLQ6ZW33 695 aa7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 GLMNQ92990 594 aa7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 RNF25Q96BH1 459 aaPredicted RBP7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 NELL2Q99435 816 aa7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 ALDH1L1O75891 902 aa7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 C7P10643 843 aa7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 NEK2P51955 445 aa7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 BLOC1S2Q6QNY1 142 aa7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 FAM196AQ6ZSG2 479 aa7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 ABTB2Q8N961 1025 aa7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 BRSK1Q8TDC3 778 aa7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 TEKT4Q8WW24 435 aa7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 NAF1Q96HR8 494 aaKnown RBP7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 SERINC2Q96SA4 455 aa7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 ARNT2Q9HBZ2 717 aa7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 ZSWIM6Q9HCJ5 1215 aa7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 DDX19AQ9NUU7 478 aaKnown RBP7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 SIPA1L3O60292 1781 aaPredicted RBP7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 UBR2Q8IWV8 1755 aa7.35□□□□□ -1.23
TM9SF4-202ENST00000398022 SBF1O95248 1867 aa7.34□□□□□ -1.23
TM9SF4-202ENST00000398022 CCDC171Q6TFL3 1326 aa7.34□□□□□ -1.23
TM9SF4-202ENST00000398022 DCAF8L1A6NGE4 600 aa7.34□□□□□ -1.23
TM9SF4-202ENST00000398022 MAGEA9P43362 315 aa7.34□□□□□ -1.23
TM9SF4-202ENST00000398022 GPR101Q96P66 508 aaPredicted RBP7.34□□□□□ -1.23
TM9SF4-202ENST00000398022 CEP104O60308 925 aa7.34□□□□□ -1.23
TM9SF4-202ENST00000398022 DDX58O95786 925 aaKnown RBP7.34□□□□□ -1.23
TM9SF4-202ENST00000398022 CAVIN2O95810 425 aa7.34□□□□□ -1.23
TM9SF4-202ENST00000398022 CRYMQ14894 314 aa7.34□□□□□ -1.23
TM9SF4-202ENST00000398022 CHRNA2Q15822 529 aa7.34□□□□□ -1.23
TM9SF4-202ENST00000398022 AACSQ86V21 672 aa7.34□□□□□ -1.23
TM9SF4-202ENST00000398022 SPC24Q8NBT2 197 aa7.34□□□□□ -1.23
TM9SF4-202ENST00000398022 TNIP2Q8NFZ5 429 aa7.34□□□□□ -1.23
TM9SF4-202ENST00000398022 LRRC45Q96CN5 670 aa7.34□□□□□ -1.23
TM9SF4-202ENST00000398022 DBF4Q9UBU7 674 aaPredicted RBP7.34□□□□□ -1.23
TM9SF4-202ENST00000398022 C2CD2Q9Y426 696 aa7.34□□□□□ -1.23
TM9SF4-202ENST00000398022 MRFAP1Q9Y605 127 aa7.34□□□□□ -1.23
TM9SF4-202ENST00000398022 N4BP2Q86UW6 1770 aaPredicted RBP7.34□□□□□ -1.23
TM9SF4-202ENST00000398022 ELP1O95163 1332 aa7.34□□□□□ -1.23
TM9SF4-202ENST00000398022 CLASP2O75122 1294 aaKnown RBP7.34□□□□□ -1.24
TM9SF4-202ENST00000398022 GCFC2P16383 781 aaKnown RBP7.34□□□□□ -1.24
TM9SF4-202ENST00000398022 PAK2Q13177 524 aa7.34□□□□□ -1.24
TM9SF4-202ENST00000398022 ARMC4Q5T2S8 1044 aa7.34□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms