RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 PPP2R5BQ15173 497 aa15.64■□□□□ 0.09
NUP98-204ENST00000397004 MIIPQ5JXC2 388 aa15.64■□□□□ 0.09
NUP98-204ENST00000397004 CCDC122Q5T0U0 273 aa15.64■□□□□ 0.09
NUP98-204ENST00000397004 GNL3LQ9NVN8 582 aaKnown RBP15.64■□□□□ 0.09
NUP98-204ENST00000397004 BTG4Q9NY30 223 aa15.64■□□□□ 0.09
NUP98-204ENST00000397004 XBP1P17861 261 aa15.64■□□□□ 0.09
NUP98-204ENST00000397004 GGCXP38435 758 aa15.64■□□□□ 0.09
NUP98-204ENST00000397004 NLRP5P59047 1200 aa15.64■□□□□ 0.09
NUP98-204ENST00000397004 FAM84BQ96KN1 310 aaPredicted RBP15.64■□□□□ 0.09
NUP98-204ENST00000397004 PURBQ96QR8 312 aaKnown RBP15.64■□□□□ 0.09
NUP98-204ENST00000397004 RASSF4Q9H2L5 321 aa15.64■□□□□ 0.09
NUP98-204ENST00000397004 SAR1BQ9Y6B6 198 aa15.64■□□□□ 0.09
NUP98-204ENST00000397004 CYTH3O43739 400 aa15.63■□□□□ 0.09
NUP98-204ENST00000397004 C2orf54Q08AI8 447 aa15.63■□□□□ 0.09
NUP98-204ENST00000397004 SMIM5Q71RC9 77 aa15.63■□□□□ 0.09
NUP98-204ENST00000397004 PACS2Q86VP3 889 aa15.63■□□□□ 0.09
NUP98-204ENST00000397004 BRIP1Q9BX63 1249 aa15.63■□□□□ 0.09
NUP98-204ENST00000397004 H7C1D1 291 aa15.63■□□□□ 0.09
NUP98-204ENST00000397004 RRP36Q96EU6 259 aaKnown RBP15.63■□□□□ 0.09
NUP98-204ENST00000397004 HAUS4Q9H6D7 363 aa15.63■□□□□ 0.09
NUP98-204ENST00000397004 DCP1AQ9NPI6 582 aaPredicted RBP15.63■□□□□ 0.09
NUP98-204ENST00000397004 RBM28Q9NW13 759 aaKnown RBP15.63■□□□□ 0.09
NUP98-204ENST00000397004 EHD2Q9NZN4 543 aa15.63■□□□□ 0.09
NUP98-204ENST00000397004 LUC7L2Q9Y383 392 aaKnown RBP15.63■□□□□ 0.09
NUP98-204ENST00000397004 FLT1P17948 1338 aa15.63■□□□□ 0.09
NUP98-204ENST00000397004 SRGNP10124 158 aa15.63■□□□□ 0.09
NUP98-204ENST00000397004 COG1Q8WTW3 980 aa15.63■□□□□ 0.09
NUP98-204ENST00000397004 JAKMIP2Q96AA8 810 aa15.63■□□□□ 0.09
NUP98-204ENST00000397004 KBTBD4Q9NVX7 518 aa15.63■□□□□ 0.09
NUP98-204ENST00000397004 SALL4Q9UJQ4 1053 aa15.63■□□□□ 0.09
NUP98-204ENST00000397004 CAPN6Q9Y6Q1 641 aa15.63■□□□□ 0.09
NUP98-204ENST00000397004 DDAH1O94760 285 aa15.62■□□□□ 0.09
NUP98-204ENST00000397004 BMP15O95972 392 aa15.62■□□□□ 0.09
NUP98-204ENST00000397004 STK4Q13043 487 aa15.62■□□□□ 0.09
NUP98-204ENST00000397004 ANKRD40Q6AI12 368 aa15.62■□□□□ 0.09
NUP98-204ENST00000397004 GIMAP8Q8ND71 665 aaPredicted RBP15.62■□□□□ 0.09
NUP98-204ENST00000397004 NHEJ1Q9H9Q4 299 aaPredicted RBP15.62■□□□□ 0.09
NUP98-204ENST00000397004 DMGDHQ9UI17 866 aaKnown RBP15.62■□□□□ 0.09
NUP98-204ENST00000397004 SCN7AQ01118 1682 aa15.62■□□□□ 0.09
NUP98-204ENST00000397004 A0A1W2PQC6 194 aa15.62■□□□□ 0.09
NUP98-204ENST00000397004 FCER1AP12319 257 aa15.62■□□□□ 0.09
NUP98-204ENST00000397004 CREG2Q8IUH2 290 aa15.62■□□□□ 0.09
NUP98-204ENST00000397004 NSUN4Q96CB9 384 aaKnown RBP15.62■□□□□ 0.09
NUP98-204ENST00000397004 KIAA1551Q9HCM1 1747 aa15.62■□□□□ 0.09
NUP98-204ENST00000397004 STAT6P42226 847 aa15.62■□□□□ 0.09
NUP98-204ENST00000397004 ITPK1Q13572 414 aa15.62■□□□□ 0.09
NUP98-204ENST00000397004 TRIM14Q14142 442 aa15.62■□□□□ 0.09
NUP98-204ENST00000397004 JAG2Q9Y219 1238 aa15.62■□□□□ 0.09
NUP98-204ENST00000397004 EIF3CLB5ME19 914 aaKnown RBP15.62■□□□□ 0.09
NUP98-204ENST00000397004 SPAG1Q07617 926 aa15.62■□□□□ 0.09
NUP98-204ENST00000397004 SKIDA1Q1XH10 827 aa15.62■□□□□ 0.09
NUP98-204ENST00000397004 CCNI2Q6ZMN8 369 aaPredicted RBP15.62■□□□□ 0.09
NUP98-204ENST00000397004 IQCA1Q86XH1 822 aa15.62■□□□□ 0.09
NUP98-204ENST00000397004 EIF3CQ99613 913 aaKnown RBP15.62■□□□□ 0.09
NUP98-204ENST00000397004 CPVLQ9H3G5 476 aa15.62■□□□□ 0.09
NUP98-204ENST00000397004 EIF3JO75822 258 aaKnown RBP15.61■□□□□ 0.09
NUP98-204ENST00000397004 PCDHA6Q9UN73 950 aa15.61■□□□□ 0.09
NUP98-204ENST00000397004 PCDHA8Q9Y5H6 950 aa15.61■□□□□ 0.09
NUP98-204ENST00000397004 MACROD2A1Z1Q3 448 aa15.61■□□□□ 0.09
NUP98-204ENST00000397004 RHOBTB3O94955 611 aa15.61■□□□□ 0.09
NUP98-204ENST00000397004 PRDX5P30044 214 aa15.61■□□□□ 0.09
NUP98-204ENST00000397004 CRKLP46109 303 aaKnown RBP15.61■□□□□ 0.09
NUP98-204ENST00000397004 MECOMQ03112 1051 aa15.61■□□□□ 0.09
NUP98-204ENST00000397004 CCDC148Q8NFR7 591 aa15.61■□□□□ 0.09
NUP98-204ENST00000397004 TUBGCP2Q9BSJ2 902 aa15.61■□□□□ 0.09
NUP98-204ENST00000397004 SELENOOQ9BVL4 669 aa15.61■□□□□ 0.09
NUP98-204ENST00000397004 VIPAS39Q9H9C1 493 aa15.61■□□□□ 0.09
NUP98-204ENST00000397004 MYH10P35580 1976 aa15.61■□□□□ 0.09
NUP98-204ENST00000397004 PES1O00541 588 aaKnown RBP15.61■□□□□ 0.09
NUP98-204ENST00000397004 LONP1P36776 959 aaKnown RBP15.61■□□□□ 0.09
NUP98-204ENST00000397004 IGHMBP2P38935 993 aaKnown RBP15.61■□□□□ 0.09
NUP98-204ENST00000397004 TRAPPC10P48553 1259 aa15.61■□□□□ 0.09
NUP98-204ENST00000397004 CCDC152Q4G0S7 254 aa15.61■□□□□ 0.09
NUP98-204ENST00000397004 BLIDQ8IZY5 108 aa15.61■□□□□ 0.09
NUP98-204ENST00000397004 CASZ1Q86V15 1759 aa15.6■□□□□ 0.09
NUP98-204ENST00000397004 INF2Q27J81 1249 aa15.6■□□□□ 0.09
NUP98-204ENST00000397004 ARL6IP4Q66PJ3 421 aaKnown RBP15.6■□□□□ 0.09
NUP98-204ENST00000397004 MLXIPQ9HAP2 919 aa15.6■□□□□ 0.09
NUP98-204ENST00000397004 MED4Q9NPJ6 270 aa15.6■□□□□ 0.09
NUP98-204ENST00000397004 ZNF662Q6ZS27 426 aa15.6■□□□□ 0.09
NUP98-204ENST00000397004 NIP7Q9Y221 180 aaKnown RBP eCLIP15.6■□□□□ 0.09
NUP98-204ENST00000397004 DOT1LQ8TEK3 1739 aa15.6■□□□□ 0.09
NUP98-204ENST00000397004 LEKR1Q6ZMV7 388 aa15.6■□□□□ 0.09
NUP98-204ENST00000397004 ARHGAP20Q9P2F6 1191 aa15.6■□□□□ 0.09
NUP98-204ENST00000397004 ORC4O43929 436 aa15.59■□□□□ 0.09
NUP98-204ENST00000397004 USP17L8P0C7I0 530 aa15.59■□□□□ 0.09
NUP98-204ENST00000397004 TNNT3P45378 269 aaPredicted RBP15.59■□□□□ 0.09
NUP98-204ENST00000397004 TXNRD3Q86VQ6 643 aa15.59■□□□□ 0.09
NUP98-204ENST00000397004 PLCD3Q8N3E9 789 aa15.59■□□□□ 0.09
NUP98-204ENST00000397004 AENQ8WTP8 325 aaKnown RBP15.59■□□□□ 0.09
NUP98-204ENST00000397004 CELF1Q92879 486 aaKnown RBP15.59■□□□□ 0.09
NUP98-204ENST00000397004 DYNLL2Q96FJ2 89 aa15.59■□□□□ 0.09
NUP98-204ENST00000397004 LRRC1Q9BTT6 524 aa15.59■□□□□ 0.09
NUP98-204ENST00000397004 BRMS1Q9HCU9 246 aa15.59■□□□□ 0.09
NUP98-204ENST00000397004 LRWD1Q9UFC0 647 aa15.59■□□□□ 0.09
NUP98-204ENST00000397004 MINPP1Q9UNW1 487 aa15.59■□□□□ 0.09
NUP98-204ENST00000397004 KIAA0895Q8NCT3 520 aa15.59■□□□□ 0.09
NUP98-204ENST00000397004 TRIM47Q96LD4 638 aa15.59■□□□□ 0.09
NUP98-204ENST00000397004 THAP9Q9H5L6 903 aa15.59■□□□□ 0.09
NUP98-204ENST00000397004 RABEP2Q9H5N1 569 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms