RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 MORC3Q14149 939 aa11.25□□□□□ -0.61
COL4A4-201ENST00000396625 MYSM1Q5VVJ2 828 aa11.25□□□□□ -0.61
COL4A4-201ENST00000396625 EP400NLQ6ZTU2 488 aa11.25□□□□□ -0.61
COL4A4-201ENST00000396625 ZNF280CQ8ND82 737 aa11.25□□□□□ -0.61
COL4A4-201ENST00000396625 DBNLQ9UJU6 430 aaKnown RBP11.25□□□□□ -0.61
COL4A4-201ENST00000396625 SNAPC4Q5SXM2 1469 aa11.25□□□□□ -0.61
COL4A4-201ENST00000396625 APBA1Q02410 837 aa11.25□□□□□ -0.61
COL4A4-201ENST00000396625 CCDC85BQ15834 202 aaPredicted RBP11.25□□□□□ -0.61
COL4A4-201ENST00000396625 SPDYE1Q8NFV5 336 aaPredicted RBP11.25□□□□□ -0.61
COL4A4-201ENST00000396625 RPS6KB1P23443 525 aa11.25□□□□□ -0.61
COL4A4-201ENST00000396625 DNM2P50570 870 aa11.25□□□□□ -0.61
COL4A4-201ENST00000396625 MRPS15P82914 257 aaKnown RBP11.25□□□□□ -0.61
COL4A4-201ENST00000396625 TBCCQ15814 346 aa11.25□□□□□ -0.61
COL4A4-201ENST00000396625 SAP30BPQ9UHR5 308 aaKnown RBP11.25□□□□□ -0.61
COL4A4-201ENST00000396625 DKC1O60832 514 aaKnown RBP eCLIP11.25□□□□□ -0.61
COL4A4-201ENST00000396625 TMED2Q15363 201 aa11.25□□□□□ -0.61
COL4A4-201ENST00000396625 E2F4Q16254 413 aa11.25□□□□□ -0.61
COL4A4-201ENST00000396625 NBPF14Q5TI25 921 aa11.25□□□□□ -0.61
COL4A4-201ENST00000396625 A6NJR5 290 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 MEIS3Q99687 375 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 WARS2Q9UGM6 360 aaKnown RBP11.24□□□□□ -0.61
COL4A4-201ENST00000396625 CCPG1Q9ULG6 757 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 CROCCQ5TZA2 2017 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 KRT8P05787 483 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 MYCLP12524 364 aaPredicted RBP11.24□□□□□ -0.61
COL4A4-201ENST00000396625 CYP2J2P51589 502 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 TRIML2Q8N7C3 387 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 C1orf112Q9NSG2 853 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 FGFR1OP2Q9NVK5 253 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 CLEC11AQ9Y240 323 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 KDM3AQ9Y4C1 1321 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 KRT4P19013 534 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 SPOUT1Q5T280 376 aaKnown RBP11.24□□□□□ -0.61
COL4A4-201ENST00000396625 SCYL2Q6P3W7 929 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 PIK3R5Q8WYR1 880 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 AZI2Q9H6S1 392 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 COG4Q9H9E3 785 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 LPXNO60711 386 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 KRT14P02533 472 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 SLMAPQ14BN4 828 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 ACBD5Q5T8D3 534 aaPredicted RBP11.24□□□□□ -0.61
COL4A4-201ENST00000396625 XPO4Q9C0E2 1151 aaKnown RBP11.24□□□□□ -0.61
COL4A4-201ENST00000396625 FIS1Q9Y3D6 152 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 SPAG7O75391 227 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 CPP00450 1065 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 TXKP42681 527 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 NCLNQ969V3 563 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 KIF1BO60333 1816 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 IFT140Q96RY7 1462 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 A0A1B0GW55 424 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 TOM1L1O75674 476 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 PDHA1P08559 390 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 DUX4L2P0CJ85 424 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 DUX4L3P0CJ86 424 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 DUX4L4P0CJ87 422 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 DUX4L5P0CJ88 424 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 DUX4L6P0CJ89 424 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 DUX4L7P0CJ90 424 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 ENOX1Q8TC92 643 aaKnown RBP11.24□□□□□ -0.61
COL4A4-201ENST00000396625 SNX29Q8TEQ0 813 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 DUX4Q9UBX2 424 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 ANGEL1Q9UNK9 670 aaKnown RBP11.24□□□□□ -0.61
COL4A4-201ENST00000396625 SOS1Q07889 1333 aaPredicted RBP11.24□□□□□ -0.61
COL4A4-201ENST00000396625 TADA3O75528 432 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 TRIM37O94972 964 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 HADHQ16836 314 aaKnown RBP11.24□□□□□ -0.61
COL4A4-201ENST00000396625 C16orf71Q8IYS4 520 aaPredicted RBP11.24□□□□□ -0.61
COL4A4-201ENST00000396625 HACE1Q8IYU2 909 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 N4BP1O75113 896 aaKnown RBP11.24□□□□□ -0.61
COL4A4-201ENST00000396625 RANBP1P43487 201 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 PRPF38AQ8NAV1 312 aaKnown RBP11.24□□□□□ -0.61
COL4A4-201ENST00000396625 EMILIN1Q9Y6C2 1016 aa11.24□□□□□ -0.61
COL4A4-201ENST00000396625 KDRP35968 1356 aa11.23□□□□□ -0.61
COL4A4-201ENST00000396625 FAM83GA6ND36 823 aa11.23□□□□□ -0.61
COL4A4-201ENST00000396625 OCM2P0CE71 109 aa11.23□□□□□ -0.61
COL4A4-201ENST00000396625 OCMP0CE72 109 aaPredicted RBP11.23□□□□□ -0.61
COL4A4-201ENST00000396625 KLC3Q6P597 504 aa11.23□□□□□ -0.61
COL4A4-201ENST00000396625 NME9Q86XW9 330 aa11.23□□□□□ -0.61
COL4A4-201ENST00000396625 TRMT44Q8IYL2 757 aaKnown RBP11.23□□□□□ -0.61
COL4A4-201ENST00000396625 TAB3Q8N5C8 712 aaPredicted RBP11.23□□□□□ -0.61
COL4A4-201ENST00000396625 NLRC4Q9NPP4 1024 aa11.23□□□□□ -0.61
COL4A4-201ENST00000396625 ZNF229Q9UJW7 825 aa11.23□□□□□ -0.61
COL4A4-201ENST00000396625 PPP2R2CQ9Y2T4 447 aa11.23□□□□□ -0.61
COL4A4-201ENST00000396625 hCG_2014768A0A024R1R8 64 aa11.23□□□□□ -0.61
COL4A4-201ENST00000396625 CTNND1O60716 968 aaKnown RBP11.23□□□□□ -0.61
COL4A4-201ENST00000396625 EFCAB14O75071 495 aa11.23□□□□□ -0.61
COL4A4-201ENST00000396625 NCF2P19878 526 aaPredicted RBP11.23□□□□□ -0.61
COL4A4-201ENST00000396625 ADCY7P51828 1080 aa11.23□□□□□ -0.61
COL4A4-201ENST00000396625 BFSP1Q12934 665 aa11.23□□□□□ -0.61
COL4A4-201ENST00000396625 TTLL11Q8NHH1 800 aa11.23□□□□□ -0.61
COL4A4-201ENST00000396625 MIS12Q9H081 205 aa11.23□□□□□ -0.61
COL4A4-201ENST00000396625 JRKLQ9Y4A0 524 aa11.23□□□□□ -0.61
COL4A4-201ENST00000396625 NESP48681 1621 aa11.23□□□□□ -0.61
COL4A4-201ENST00000396625 CYTH2Q99418 400 aa11.23□□□□□ -0.61
COL4A4-201ENST00000396625 TUBB6Q9BUF5 446 aa11.23□□□□□ -0.61
COL4A4-201ENST00000396625 NYXQ9GZU5 481 aa11.23□□□□□ -0.61
COL4A4-201ENST00000396625 ABL1P00519 1130 aa11.23□□□□□ -0.61
COL4A4-201ENST00000396625 USH1GQ495M9 461 aa11.23□□□□□ -0.61
COL4A4-201ENST00000396625 GSDMAQ96QA5 445 aa11.23□□□□□ -0.61
COL4A4-201ENST00000396625 JAG2Q9Y219 1238 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms