RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 SULF1Q8IWU6 871 aa14.58□□□□□ -0.08
TRIM39-204ENST00000396548 ENGASEQ8NFI3 743 aa14.58□□□□□ -0.08
TRIM39-204ENST00000396548 RASGRP4Q8TDF6 673 aa14.58□□□□□ -0.08
TRIM39-204ENST00000396548 SNCAIPQ9Y6H5 919 aa14.58□□□□□ -0.08
TRIM39-204ENST00000396548 SNW1Q13573 536 aaKnown RBP14.57□□□□□ -0.08
TRIM39-204ENST00000396548 MAP3K11Q16584 847 aa14.57□□□□□ -0.08
TRIM39-204ENST00000396548 PIK3AP1Q6ZUJ8 805 aa14.57□□□□□ -0.08
TRIM39-204ENST00000396548 C4orf32Q8N8J7 132 aa14.57□□□□□ -0.08
TRIM39-204ENST00000396548 C12orf42Q96LP6 360 aa14.57□□□□□ -0.08
TRIM39-204ENST00000396548 C6orf50Q9HD87 102 aa14.57□□□□□ -0.08
TRIM39-204ENST00000396548 FEM1BQ9UK73 627 aa14.57□□□□□ -0.08
TRIM39-204ENST00000396548 AFG3L2Q9Y4W6 797 aa14.57□□□□□ -0.08
TRIM39-204ENST00000396548 FAM237AA0A1B0GTK4 181 aa14.57□□□□□ -0.08
TRIM39-204ENST00000396548 WDR46O15213 610 aaKnown RBP14.57□□□□□ -0.08
TRIM39-204ENST00000396548 RAD21O60216 631 aa14.57□□□□□ -0.08
TRIM39-204ENST00000396548 GNA11P29992 359 aa14.57□□□□□ -0.08
TRIM39-204ENST00000396548 STK38Q15208 465 aa14.57□□□□□ -0.08
TRIM39-204ENST00000396548 CDCA5Q96FF9 252 aa14.57□□□□□ -0.08
TRIM39-204ENST00000396548 GZF1Q9H116 711 aaPredicted RBP14.57□□□□□ -0.08
TRIM39-204ENST00000396548 FBXO2Q9UK22 296 aaPredicted RBP14.57□□□□□ -0.08
TRIM39-204ENST00000396548 OPLAHO14841 1288 aa14.57□□□□□ -0.08
TRIM39-204ENST00000396548 BACE1P56817 501 aa14.57□□□□□ -0.08
TRIM39-204ENST00000396548 RBBP6Q7Z6E9 1792 aaKnown RBP14.56□□□□□ -0.08
TRIM39-204ENST00000396548 ZNF445P59923 1031 aa14.56□□□□□ -0.08
TRIM39-204ENST00000396548 SNAP25P60880 206 aa14.56□□□□□ -0.08
TRIM39-204ENST00000396548 MTMR2Q13614 643 aa14.56□□□□□ -0.08
TRIM39-204ENST00000396548 GSE1Q14687 1217 aa14.56□□□□□ -0.08
TRIM39-204ENST00000396548 ZYXQ15942 572 aaKnown RBP14.56□□□□□ -0.08
TRIM39-204ENST00000396548 FAM160B2Q86V87 743 aa14.56□□□□□ -0.08
TRIM39-204ENST00000396548 ZNF280CQ8ND82 737 aa14.56□□□□□ -0.08
TRIM39-204ENST00000396548 PNMA8AQ86V59 439 aaPredicted RBP14.56□□□□□ -0.08
TRIM39-204ENST00000396548 MYH7BA7E2Y1 1941 aa14.56□□□□□ -0.08
TRIM39-204ENST00000396548 ME1P48163 572 aa14.55□□□□□ -0.08
TRIM39-204ENST00000396548 ADCY7P51828 1080 aa14.55□□□□□ -0.08
TRIM39-204ENST00000396548 VGLL4Q14135 290 aa14.55□□□□□ -0.08
TRIM39-204ENST00000396548 BICD2Q8TD16 824 aa14.55□□□□□ -0.08
TRIM39-204ENST00000396548 CHURC1Q8WUH1 139 aa14.55□□□□□ -0.08
TRIM39-204ENST00000396548 A0A0G2JMZ2 1700 aa14.55□□□□□ -0.08
TRIM39-204ENST00000396548 COL11A1P12107 1806 aaPredicted RBP14.55□□□□□ -0.08
TRIM39-204ENST00000396548 NR1I2O75469 434 aa14.55□□□□□ -0.08
TRIM39-204ENST00000396548 VCAM1P19320 739 aa14.55□□□□□ -0.08
TRIM39-204ENST00000396548 PTPREP23469 700 aa14.55□□□□□ -0.08
TRIM39-204ENST00000396548 MAP3K9P80192 1104 aa14.55□□□□□ -0.08
TRIM39-204ENST00000396548 TTC38Q5R3I4 469 aa14.55□□□□□ -0.08
TRIM39-204ENST00000396548 AMNQ9BXJ7 453 aa14.55□□□□□ -0.08
TRIM39-204ENST00000396548 AS3MTQ9HBK9 375 aa14.55□□□□□ -0.08
TRIM39-204ENST00000396548 FBXO28Q9NVF7 368 aa14.55□□□□□ -0.08
TRIM39-204ENST00000396548 TMEM260Q9NX78 707 aa14.55□□□□□ -0.08
TRIM39-204ENST00000396548 HPSEQ9Y251 543 aa14.55□□□□□ -0.08
TRIM39-204ENST00000396548 PCDHA1Q9Y5I3 950 aa14.55□□□□□ -0.08
TRIM39-204ENST00000396548 TRIM75PA6NK02 468 aa14.55□□□□□ -0.08
TRIM39-204ENST00000396548 MARCKSP29966 332 aaPredicted RBP14.55□□□□□ -0.08
TRIM39-204ENST00000396548 USP14P54578 494 aa14.55□□□□□ -0.08
TRIM39-204ENST00000396548 SPP2Q13103 211 aa14.55□□□□□ -0.08
TRIM39-204ENST00000396548 SH3D19Q5HYK7 790 aa14.55□□□□□ -0.08
TRIM39-204ENST00000396548 SHC4Q6S5L8 630 aa14.55□□□□□ -0.08
TRIM39-204ENST00000396548 KRT25Q7Z3Z0 450 aa14.55□□□□□ -0.08
TRIM39-204ENST00000396548 CCAR1Q8IX12 1150 aaKnown RBP14.55□□□□□ -0.08
TRIM39-204ENST00000396548 PICK1Q9NRD5 415 aa14.55□□□□□ -0.08
TRIM39-204ENST00000396548 ZNF536O15090 1300 aa14.54□□□□□ -0.08
TRIM39-204ENST00000396548 MEIS2O14770 477 aa14.54□□□□□ -0.08
TRIM39-204ENST00000396548 POTEIP0CG38 1075 aa14.54□□□□□ -0.08
TRIM39-204ENST00000396548 POTEJP0CG39 1038 aa14.54□□□□□ -0.08
TRIM39-204ENST00000396548 CMA1P23946 247 aa14.54□□□□□ -0.08
TRIM39-204ENST00000396548 ATP2C1P98194 919 aaPredicted RBP14.54□□□□□ -0.08
TRIM39-204ENST00000396548 FMR1NBQ8N0W7 255 aaPredicted RBP14.54□□□□□ -0.08
TRIM39-204ENST00000396548 P2RX7Q99572 595 aaKnown RBP14.54□□□□□ -0.08
TRIM39-204ENST00000396548 NOL7Q9UMY1 257 aaKnown RBP14.54□□□□□ -0.08
TRIM39-204ENST00000396548 SRPRBQ9Y5M8 271 aaKnown RBP14.54□□□□□ -0.08
TRIM39-204ENST00000396548 MRVI1Q9Y6F6 885 aa14.54□□□□□ -0.08
TRIM39-204ENST00000396548 ZHX2Q9Y6X8 837 aa14.54□□□□□ -0.08
TRIM39-204ENST00000396548 CUTAO60888 179 aa14.54□□□□□ -0.08
TRIM39-204ENST00000396548 GRIN1Q05586 938 aa14.54□□□□□ -0.08
TRIM39-204ENST00000396548 CCDC183Q5T5S1 534 aa14.54□□□□□ -0.08
TRIM39-204ENST00000396548 RESP18Q5W5W9 173 aa14.54□□□□□ -0.08
TRIM39-204ENST00000396548 FBXO11Q86XK2 927 aa14.54□□□□□ -0.08
TRIM39-204ENST00000396548 REXO1Q8N1G1 1221 aaKnown RBP14.54□□□□□ -0.08
TRIM39-204ENST00000396548 ZNF579Q8NAF0 562 aaKnown RBP14.54□□□□□ -0.08
TRIM39-204ENST00000396548 BIN2Q9UBW5 565 aaPredicted RBP14.54□□□□□ -0.08
TRIM39-204ENST00000396548 CEP131Q9UPN4 1083 aa14.54□□□□□ -0.08
TRIM39-204ENST00000396548 FSD2A1L4K1 749 aa14.53□□□□□ -0.08
TRIM39-204ENST00000396548 RBM43Q6ZSC3 357 aaKnown RBP14.53□□□□□ -0.08
TRIM39-204ENST00000396548 FEZ1Q99689 392 aa14.53□□□□□ -0.08
TRIM39-204ENST00000396548 C19orf81C9J6K1 198 aa14.53□□□□□ -0.08
TRIM39-204ENST00000396548 IL17AQ16552 155 aa14.53□□□□□ -0.08
TRIM39-204ENST00000396548 CRYGNQ8WXF5 182 aa14.53□□□□□ -0.08
TRIM39-204ENST00000396548 CUL5Q93034 780 aa14.53□□□□□ -0.08
TRIM39-204ENST00000396548 CLIC6Q96NY7 704 aa14.53□□□□□ -0.08
TRIM39-204ENST00000396548 PSTPIP2Q9H939 334 aa14.53□□□□□ -0.08
TRIM39-204ENST00000396548 ADAMTS5Q9UNA0 930 aa14.53□□□□□ -0.08
TRIM39-204ENST00000396548 CCDC194A0A1B0GVG4 234 aa14.53□□□□□ -0.08
TRIM39-204ENST00000396548 TAL1P17542 331 aaPredicted RBP14.53□□□□□ -0.08
TRIM39-204ENST00000396548 ZNF174Q15697 407 aa14.53□□□□□ -0.08
TRIM39-204ENST00000396548 INF2Q27J81 1249 aa14.53□□□□□ -0.08
TRIM39-204ENST00000396548 GAS2L3Q86XJ1 694 aa14.53□□□□□ -0.08
TRIM39-204ENST00000396548 TEX2Q8IWB9 1127 aa14.53□□□□□ -0.08
TRIM39-204ENST00000396548 KRI1Q8N9T8 703 aaKnown RBP14.53□□□□□ -0.08
TRIM39-204ENST00000396548 MRPS27Q92552 414 aaKnown RBP14.53□□□□□ -0.08
TRIM39-204ENST00000396548 DACT1Q9NYF0 836 aa14.53□□□□□ -0.08
TRIM39-204ENST00000396548 BMP15O95972 392 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms