RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 HSPA1BP0DMV9 641 aaKnown RBP24.69■■□□□ 1.54
FXN-202ENST00000396364 TMEM132BQ14DG7 1078 aa24.69■■□□□ 1.54
FXN-202ENST00000396364 TKFCQ3LXA3 575 aa24.69■■□□□ 1.54
FXN-202ENST00000396364 CCDC174Q6PII3 467 aa24.69■■□□□ 1.54
FXN-202ENST00000396364 TRIM22Q8IYM9 498 aa24.69■■□□□ 1.54
FXN-202ENST00000396364 BTBD7Q9P203 1132 aa24.69■■□□□ 1.54
FXN-202ENST00000396364 FKTNO75072 461 aa24.68■■□□□ 1.54
FXN-202ENST00000396364 CDC27P30260 824 aa24.68■■□□□ 1.54
FXN-202ENST00000396364 MAPK4P31152 587 aa24.68■■□□□ 1.54
FXN-202ENST00000396364 ADD1P35611 737 aaKnown RBP24.68■■□□□ 1.54
FXN-202ENST00000396364 CTCFP49711 727 aaPredicted RBP24.68■■□□□ 1.54
FXN-202ENST00000396364 SNRNP48Q6IEG0 339 aaKnown RBP24.68■■□□□ 1.54
FXN-202ENST00000396364 HOMER1Q86YM7 354 aa24.68■■□□□ 1.54
FXN-202ENST00000396364 RIOX2Q8IUF8 465 aa24.68■■□□□ 1.54
FXN-202ENST00000396364 SRBD1Q8N5C6 995 aaKnown RBP24.68■■□□□ 1.54
FXN-202ENST00000396364 SHCBP1Q8NEM2 672 aa24.68■■□□□ 1.54
FXN-202ENST00000396364 ERO1AQ96HE7 468 aa24.68■■□□□ 1.54
FXN-202ENST00000396364 CPVLQ9H3G5 476 aa24.68■■□□□ 1.54
FXN-202ENST00000396364 MROH8Q9H579 483 aa24.68■■□□□ 1.54
FXN-202ENST00000396364 RAVER2Q9HCJ3 691 aaKnown RBP24.68■■□□□ 1.54
FXN-202ENST00000396364 TXNRD2Q9NNW7 524 aa24.68■■□□□ 1.54
FXN-202ENST00000396364 FBXO40Q9UH90 709 aa24.68■■□□□ 1.54
FXN-202ENST00000396364 ZNF214Q9UL59 606 aaPredicted RBP24.68■■□□□ 1.54
FXN-202ENST00000396364 CCPG1Q9ULG6 757 aa24.68■■□□□ 1.54
FXN-202ENST00000396364 PNMA6FA0A0J9YX94 578 aa24.67■■□□□ 1.54
FXN-202ENST00000396364 IFNAR1P17181 557 aa24.67■■□□□ 1.54
FXN-202ENST00000396364 ME3Q16798 604 aa24.67■■□□□ 1.54
FXN-202ENST00000396364 FBXO11Q86XK2 927 aa24.67■■□□□ 1.54
FXN-202ENST00000396364 CCDC82Q8N4S0 544 aa24.67■■□□□ 1.54
FXN-202ENST00000396364 REPS2Q8NFH8 660 aa24.67■■□□□ 1.54
FXN-202ENST00000396364 GTF3C6Q969F1 213 aa24.67■■□□□ 1.54
FXN-202ENST00000396364 AMNQ9BXJ7 453 aa24.67■■□□□ 1.54
FXN-202ENST00000396364 CNMDO75829 334 aa24.66■■□□□ 1.54
FXN-202ENST00000396364 FCGRTP55899 365 aa24.66■■□□□ 1.54
FXN-202ENST00000396364 SCRN1Q12765 414 aa24.66■■□□□ 1.54
FXN-202ENST00000396364 QRICH1Q2TAL8 776 aa24.66■■□□□ 1.54
FXN-202ENST00000396364 MTMR8Q96EF0 704 aa24.66■■□□□ 1.54
FXN-202ENST00000396364 R3HDMLQ9H3Y0 253 aa24.66■■□□□ 1.54
FXN-202ENST00000396364 NCOA5Q9HCD5 579 aaKnown RBP24.66■■□□□ 1.54
FXN-202ENST00000396364 FAM217BQ9NTX9 383 aaPredicted RBP24.66■■□□□ 1.54
FXN-202ENST00000396364 IVNS1ABPQ9Y6Y0 642 aa24.66■■□□□ 1.54
FXN-202ENST00000396364 CNTNAP5Q8WYK1 1306 aa24.65■■□□□ 1.54
FXN-202ENST00000396364 CYTH3O43739 400 aa24.65■■□□□ 1.54
FXN-202ENST00000396364 SLC4A3P48751 1232 aa24.65■■□□□ 1.54
FXN-202ENST00000396364 SSRP1Q08945 709 aaKnown RBP24.65■■□□□ 1.54
FXN-202ENST00000396364 WDR78Q5VTH9 848 aa24.65■■□□□ 1.54
FXN-202ENST00000396364 NBPF11Q86T75 865 aa24.65■■□□□ 1.54
FXN-202ENST00000396364 NCAPG2Q86XI2 1143 aa24.65■■□□□ 1.54
FXN-202ENST00000396364 CMTR1Q8N1G2 835 aaKnown RBP24.65■■□□□ 1.54
FXN-202ENST00000396364 CHST13Q8NET6 341 aa24.65■■□□□ 1.54
FXN-202ENST00000396364 PIGSQ96S52 555 aa24.65■■□□□ 1.54
FXN-202ENST00000396364 MOV10L1Q9BXT6 1211 aaKnown RBP24.65■■□□□ 1.54
FXN-202ENST00000396364 RNF26Q9BY78 433 aaPredicted RBP24.65■■□□□ 1.54
FXN-202ENST00000396364 ABCB11O95342 1321 aa24.64■■□□□ 1.54
FXN-202ENST00000396364 hCG_1984214I3L0E3 225 aa24.64■■□□□ 1.54
FXN-202ENST00000396364 GNRH1P01148 92 aa24.64■■□□□ 1.54
FXN-202ENST00000396364 LACTBP83111 547 aaPredicted RBP24.64■■□□□ 1.54
FXN-202ENST00000396364 ZNF713Q8N859 430 aaPredicted RBP24.64■■□□□ 1.54
FXN-202ENST00000396364 TSKSQ9UJT2 592 aa24.64■■□□□ 1.54
FXN-202ENST00000396364 TNPO2O14787 897 aaKnown RBP24.63■■□□□ 1.53
FXN-202ENST00000396364 ALAS1P13196 640 aa24.63■■□□□ 1.53
FXN-202ENST00000396364 HOXD10P28358 340 aa24.63■■□□□ 1.53
FXN-202ENST00000396364 SNAP25P60880 206 aa24.63■■□□□ 1.53
FXN-202ENST00000396364 Q3C1V9 767 aa24.63■■□□□ 1.53
FXN-202ENST00000396364 HSCBQ8IWL3 235 aa24.63■■□□□ 1.53
FXN-202ENST00000396364 ZNF296Q8WUU4 475 aaPredicted RBP24.63■■□□□ 1.53
FXN-202ENST00000396364 PIBF1Q8WXW3 757 aa24.63■■□□□ 1.53
FXN-202ENST00000396364 COA7Q96BR5 231 aa24.63■■□□□ 1.53
FXN-202ENST00000396364 AGBL1Q96MI9 1066 aa24.63■■□□□ 1.53
FXN-202ENST00000396364 LLPHQ9BRT6 129 aaKnown RBP24.63■■□□□ 1.53
FXN-202ENST00000396364 ACAD9Q9H845 621 aa24.63■■□□□ 1.53
FXN-202ENST00000396364 MRPL11Q9Y3B7 192 aaKnown RBP24.63■■□□□ 1.53
FXN-202ENST00000396364 V9GY48 417 aaPredicted RBP24.63■■□□□ 1.53
FXN-202ENST00000396364 ZNF536O15090 1300 aa24.62■■□□□ 1.53
FXN-202ENST00000396364 FOXN1O15353 648 aa24.62■■□□□ 1.53
FXN-202ENST00000396364 PRPF3O43395 683 aaKnown RBP24.62■■□□□ 1.53
FXN-202ENST00000396364 STRNO43815 780 aa24.62■■□□□ 1.53
FXN-202ENST00000396364 FMNL1O95466 1100 aaPredicted RBP24.62■■□□□ 1.53
FXN-202ENST00000396364 ERCC3P19447 782 aa24.62■■□□□ 1.53
FXN-202ENST00000396364 USH1GQ495M9 461 aa24.62■■□□□ 1.53
FXN-202ENST00000396364 POTEEQ6S8J3 1075 aa24.62■■□□□ 1.53
FXN-202ENST00000396364 NECAB1Q8N987 351 aa24.62■■□□□ 1.53
FXN-202ENST00000396364 WASF1Q92558 559 aa24.62■■□□□ 1.53
FXN-202ENST00000396364 SNX21Q969T3 373 aa24.62■■□□□ 1.53
FXN-202ENST00000396364 TRERF1Q96PN7 1200 aa24.62■■□□□ 1.53
FXN-202ENST00000396364 SLC26A6Q9BXS9 759 aa24.62■■□□□ 1.53
FXN-202ENST00000396364 MAF1Q9H063 256 aa24.62■■□□□ 1.53
FXN-202ENST00000396364 PCDHA1Q9Y5I3 950 aa24.62■■□□□ 1.53
FXN-202ENST00000396364 MGAMO43451 1857 aa24.62■■□□□ 1.53
FXN-202ENST00000396364 BAZ2BQ9UIF8 2168 aaKnown RBP24.61■■□□□ 1.53
FXN-202ENST00000396364 PCNTO95613 3336 aa24.61■■□□□ 1.53
FXN-202ENST00000396364 LARGE1O95461 756 aa24.61■■□□□ 1.53
FXN-202ENST00000396364 PSMC4P43686 418 aa24.61■■□□□ 1.53
FXN-202ENST00000396364 FUT2Q10981 343 aa24.61■■□□□ 1.53
FXN-202ENST00000396364 NTRK3Q16288 839 aa24.61■■□□□ 1.53
FXN-202ENST00000396364 MCF2L2Q86YR7 1114 aa24.61■■□□□ 1.53
FXN-202ENST00000396364 CCDC12Q8WUD4 166 aaPredicted RBP24.61■■□□□ 1.53
FXN-202ENST00000396364 RNF146Q9NTX7 359 aa24.61■■□□□ 1.53
FXN-202ENST00000396364 STK36Q9NRP7 1315 aa24.61■■□□□ 1.53
FXN-202ENST00000396364 DEXIO95424 95 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms