RNA–Protein interactions for RNA: ENST00000396205.6

LMO3-205, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 3,534 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-205ENST00000396205 C11orf49Q9H6J7 331 aa7.75□□□□□ -1.17
LMO3-205ENST00000396205 PRR12Q9ULL5 1215 aa7.75□□□□□ -1.17
LMO3-205ENST00000396205 DDAH1O94760 285 aa7.75□□□□□ -1.17
LMO3-205ENST00000396205 SLC34A2O95436 690 aa7.75□□□□□ -1.17
LMO3-205ENST00000396205 ELNP15502 786 aa7.75□□□□□ -1.17
LMO3-205ENST00000396205 SYDE2Q5VT97 1194 aa7.75□□□□□ -1.17
LMO3-205ENST00000396205 CCSAPQ6IQ19 270 aaPredicted RBP7.75□□□□□ -1.17
LMO3-205ENST00000396205 TMTC2Q8N394 836 aa7.75□□□□□ -1.17
LMO3-205ENST00000396205 KLHDC9Q8NEP7 349 aa7.75□□□□□ -1.17
LMO3-205ENST00000396205 TRPV1Q8NER1 839 aa7.75□□□□□ -1.17
LMO3-205ENST00000396205 LZTS2Q9BRK4 669 aa7.75□□□□□ -1.17
LMO3-205ENST00000396205 PAGR1Q9BTK6 254 aa7.75□□□□□ -1.17
LMO3-205ENST00000396205 VTA1Q9NP79 307 aa7.75□□□□□ -1.17
LMO3-205ENST00000396205 MOXD2PA6NHM9 499 aa7.74□□□□□ -1.17
LMO3-205ENST00000396205 LIFRP42702 1097 aa7.74□□□□□ -1.17
LMO3-205ENST00000396205 ATP2B2Q01814 1243 aa7.74□□□□□ -1.17
LMO3-205ENST00000396205 MB21D2Q8IYB1 491 aaPredicted RBP7.74□□□□□ -1.17
LMO3-205ENST00000396205 ARRDC4Q8NCT1 418 aa7.74□□□□□ -1.17
LMO3-205ENST00000396205 TMEM87BQ96K49 555 aa7.74□□□□□ -1.17
LMO3-205ENST00000396205 ABHD16BQ9H3Z7 469 aa7.74□□□□□ -1.17
LMO3-205ENST00000396205 GTF3C3Q9Y5Q9 886 aa7.74□□□□□ -1.17
LMO3-205ENST00000396205 PALM3A6NDB9 673 aaPredicted RBP7.74□□□□□ -1.17
LMO3-205ENST00000396205 NKRFO15226 690 aaKnown RBP eCLIP7.74□□□□□ -1.17
LMO3-205ENST00000396205 AKR1A1P14550 325 aa7.74□□□□□ -1.17
LMO3-205ENST00000396205 GRM4Q14833 912 aa7.74□□□□□ -1.17
LMO3-205ENST00000396205 NECTIN1Q15223 517 aa7.74□□□□□ -1.17
LMO3-205ENST00000396205 ZYXQ15942 572 aaKnown RBP7.74□□□□□ -1.17
LMO3-205ENST00000396205 SNRNP48Q6IEG0 339 aaKnown RBP7.74□□□□□ -1.17
LMO3-205ENST00000396205 CWC27Q6UX04 472 aaKnown RBP7.74□□□□□ -1.17
LMO3-205ENST00000396205 CLEC10AQ8IUN9 316 aa7.74□□□□□ -1.17
LMO3-205ENST00000396205 ENAHQ8N8S7 591 aaPredicted RBP7.74□□□□□ -1.17
LMO3-205ENST00000396205 ESYT1Q9BSJ8 1104 aa7.74□□□□□ -1.17
LMO3-205ENST00000396205 RIOX1Q9H6W3 641 aa7.74□□□□□ -1.17
LMO3-205ENST00000396205 ADAMTS4O75173 837 aa7.74□□□□□ -1.17
LMO3-205ENST00000396205 GJA9P57773 515 aa7.74□□□□□ -1.17
LMO3-205ENST00000396205 PPP2R5BQ15173 497 aa7.74□□□□□ -1.17
LMO3-205ENST00000396205 SGMS1Q86VZ5 419 aa7.74□□□□□ -1.17
LMO3-205ENST00000396205 SLC43A3Q8NBI5 491 aa7.74□□□□□ -1.17
LMO3-205ENST00000396205 TOX2Q96NM4 488 aa7.74□□□□□ -1.17
LMO3-205ENST00000396205 hCG_1984214I3L0E3 225 aa7.73□□□□□ -1.17
LMO3-205ENST00000396205 DUSP11O75319 330 aaKnown RBP7.73□□□□□ -1.17
LMO3-205ENST00000396205 FAM47AQ5JRC9 791 aa7.73□□□□□ -1.17
LMO3-205ENST00000396205 CCAR1Q8IX12 1150 aaKnown RBP7.73□□□□□ -1.17
LMO3-205ENST00000396205 ZNF713Q8N859 430 aaPredicted RBP7.73□□□□□ -1.17
LMO3-205ENST00000396205 NCOA7Q8NI08 942 aa7.73□□□□□ -1.17
LMO3-205ENST00000396205 CLEC4DQ8WXI8 215 aa7.73□□□□□ -1.17
LMO3-205ENST00000396205 EMID1Q96A84 441 aaPredicted RBP7.73□□□□□ -1.17
LMO3-205ENST00000396205 SPZ1Q9BXG8 430 aa7.73□□□□□ -1.17
LMO3-205ENST00000396205 IL25Q9H293 177 aa7.73□□□□□ -1.17
LMO3-205ENST00000396205 FBXO28Q9NVF7 368 aa7.73□□□□□ -1.17
LMO3-205ENST00000396205 CYP39A1Q9NYL5 469 aa7.73□□□□□ -1.17
LMO3-205ENST00000396205 SCN10AQ9Y5Y9 1956 aa7.73□□□□□ -1.17
LMO3-205ENST00000396205 B4DLN1 442 aa7.73□□□□□ -1.17
LMO3-205ENST00000396205 TMEM232C9JQI7 657 aa7.73□□□□□ -1.17
LMO3-205ENST00000396205 CYP21A2P08686 494 aa7.73□□□□□ -1.17
LMO3-205ENST00000396205 CALM1P0DP23 149 aa7.73□□□□□ -1.17
LMO3-205ENST00000396205 CALM2P0DP24 149 aa7.73□□□□□ -1.17
LMO3-205ENST00000396205 CALM3P0DP25 149 aa7.73□□□□□ -1.17
LMO3-205ENST00000396205 MRPL12P52815 198 aaKnown RBP7.73□□□□□ -1.17
LMO3-205ENST00000396205 CCL14Q16627 93 aa7.73□□□□□ -1.17
LMO3-205ENST00000396205 DPP9Q86TI2 863 aa7.73□□□□□ -1.17
LMO3-205ENST00000396205 SPICE1Q8N0Z3 855 aa7.73□□□□□ -1.17
LMO3-205ENST00000396205 LRRC47Q8N1G4 583 aaKnown RBP7.73□□□□□ -1.17
LMO3-205ENST00000396205 IWS1Q96ST2 819 aa7.73□□□□□ -1.17
LMO3-205ENST00000396205 MPHOSPH6Q99547 160 aaKnown RBP7.73□□□□□ -1.17
LMO3-205ENST00000396205 ZSWIM5Q9P217 1185 aa7.73□□□□□ -1.17
LMO3-205ENST00000396205 ELP1O95163 1332 aa7.73□□□□□ -1.17
LMO3-205ENST00000396205 TNKSO95271 1327 aa7.73□□□□□ -1.17
LMO3-205ENST00000396205 PRDM1O75626 825 aa7.73□□□□□ -1.17
LMO3-205ENST00000396205 STAM2O75886 525 aa7.73□□□□□ -1.17
LMO3-205ENST00000396205 CABYRO75952 493 aa7.73□□□□□ -1.17
LMO3-205ENST00000396205 CYP2B6P20813 491 aa7.73□□□□□ -1.17
LMO3-205ENST00000396205 CCND3P30281 292 aaPredicted RBP7.73□□□□□ -1.17
LMO3-205ENST00000396205 HSD17B4P51659 736 aa7.73□□□□□ -1.17
LMO3-205ENST00000396205 B4GALNT3Q6L9W6 998 aa7.73□□□□□ -1.17
LMO3-205ENST00000396205 ANKRD33Q7Z3H0 272 aa7.73□□□□□ -1.17
LMO3-205ENST00000396205 PNMA1Q8ND90 353 aa7.73□□□□□ -1.17
LMO3-205ENST00000396205 DEFB118Q96PH6 123 aa7.73□□□□□ -1.17
LMO3-205ENST00000396205 AGXT2Q9BYV1 514 aa7.73□□□□□ -1.17
LMO3-205ENST00000396205 ADD3Q9UEY8 706 aaKnown RBP7.73□□□□□ -1.17
LMO3-205ENST00000396205 NR2E3Q9Y5X4 410 aa7.73□□□□□ -1.17
LMO3-205ENST00000396205 MROH7Q68CQ1 1323 aa7.72□□□□□ -1.17
LMO3-205ENST00000396205 RANBP6O60518 1105 aaKnown RBP7.72□□□□□ -1.17
LMO3-205ENST00000396205 CAPN15O75808 1086 aa7.72□□□□□ -1.17
LMO3-205ENST00000396205 SNAI1O95863 264 aaPredicted RBP7.72□□□□□ -1.17
LMO3-205ENST00000396205 HMGB1P09429 215 aaKnown RBP7.72□□□□□ -1.17
LMO3-205ENST00000396205 KRT32Q14532 448 aa7.72□□□□□ -1.17
LMO3-205ENST00000396205 NCAPG2Q86XI2 1143 aa7.72□□□□□ -1.17
LMO3-205ENST00000396205 MCF2L2Q86YR7 1114 aa7.72□□□□□ -1.17
LMO3-205ENST00000396205 E7EWF7 191 aa7.72□□□□□ -1.17
LMO3-205ENST00000396205 PIK3CDO00329 1044 aa7.72□□□□□ -1.17
LMO3-205ENST00000396205 HOXD8P13378 290 aaPredicted RBP7.72□□□□□ -1.17
LMO3-205ENST00000396205 PTPN11Q06124 597 aaPredicted RBP7.72□□□□□ -1.17
LMO3-205ENST00000396205 IQSEC1Q6DN90 963 aa7.72□□□□□ -1.17
LMO3-205ENST00000396205 IGDCC4Q8TDY8 1250 aa7.72□□□□□ -1.17
LMO3-205ENST00000396205 KAT14Q9H8E8 782 aa7.72□□□□□ -1.17
LMO3-205ENST00000396205 A1CFQ9NQ94 594 aaKnown RBP7.72□□□□□ -1.17
LMO3-205ENST00000396205 MAD2L2Q9UI95 211 aa7.72□□□□□ -1.17
LMO3-205ENST00000396205 FAM184BQ9ULE4 1060 aa7.72□□□□□ -1.17
LMO3-205ENST00000396205 GNEQ9Y223 722 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms