RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 XRCC6P12956 609 aaKnown RBP eCLIP13.58□□□□□ -0.23
GTF2A2-202ENST00000396060 SLC16A2P36021 539 aa13.58□□□□□ -0.23
GTF2A2-202ENST00000396060 ECE1P42892 770 aa13.58□□□□□ -0.23
GTF2A2-202ENST00000396060 NDUFA8P51970 172 aa13.58□□□□□ -0.23
GTF2A2-202ENST00000396060 MRPL12P52815 198 aaKnown RBP13.58□□□□□ -0.23
GTF2A2-202ENST00000396060 QRICH1Q2TAL8 776 aa13.58□□□□□ -0.23
GTF2A2-202ENST00000396060 NBPF12Q5TAG4 269 aaPredicted RBP13.58□□□□□ -0.23
GTF2A2-202ENST00000396060 C9orf131Q5VYM1 1079 aa13.58□□□□□ -0.23
GTF2A2-202ENST00000396060 MCTP2Q6DN12 878 aa13.58□□□□□ -0.23
GTF2A2-202ENST00000396060 C4orf32Q8N8J7 132 aa13.58□□□□□ -0.23
GTF2A2-202ENST00000396060 WDR18Q9BV38 432 aa13.58□□□□□ -0.23
GTF2A2-202ENST00000396060 KIAA1683Q9H0B3 1180 aa13.58□□□□□ -0.23
GTF2A2-202ENST00000396060 A0A1B0GVL5 298 aa13.58□□□□□ -0.24
GTF2A2-202ENST00000396060 TMEM232C9JQI7 657 aa13.58□□□□□ -0.24
GTF2A2-202ENST00000396060 LAD1O00515 517 aa13.58□□□□□ -0.24
GTF2A2-202ENST00000396060 DDNO94850 711 aaPredicted RBP13.58□□□□□ -0.24
GTF2A2-202ENST00000396060 CLK2P49760 499 aaKnown RBP13.58□□□□□ -0.24
GTF2A2-202ENST00000396060 ADCY7P51828 1080 aa13.58□□□□□ -0.24
GTF2A2-202ENST00000396060 NONOQ15233 471 aaKnown RBP eCLIP13.58□□□□□ -0.24
GTF2A2-202ENST00000396060 SUPT20HL1Q3ZLR7 823 aa13.58□□□□□ -0.24
GTF2A2-202ENST00000396060 REXO1Q8N1G1 1221 aaKnown RBP13.58□□□□□ -0.24
GTF2A2-202ENST00000396060 CHURC1Q8WUH1 139 aa13.58□□□□□ -0.24
GTF2A2-202ENST00000396060 COA7Q96BR5 231 aa13.58□□□□□ -0.24
GTF2A2-202ENST00000396060 WNT7AO00755 349 aa13.57□□□□□ -0.24
GTF2A2-202ENST00000396060 ZNF202O95125 648 aa13.57□□□□□ -0.24
GTF2A2-202ENST00000396060 PFKFB1P16118 471 aa13.57□□□□□ -0.24
GTF2A2-202ENST00000396060 LMOD1P29536 600 aaPredicted RBP13.57□□□□□ -0.24
GTF2A2-202ENST00000396060 ZNF174Q15697 407 aa13.57□□□□□ -0.24
GTF2A2-202ENST00000396060 CDC37Q16543 378 aaPredicted RBP13.57□□□□□ -0.24
GTF2A2-202ENST00000396060 KIAA1755Q5JYT7 1200 aa13.57□□□□□ -0.24
GTF2A2-202ENST00000396060 FAM160B2Q86V87 743 aa13.57□□□□□ -0.24
GTF2A2-202ENST00000396060 LPAR1Q92633 364 aa13.57□□□□□ -0.24
GTF2A2-202ENST00000396060 AMNQ9BXJ7 453 aa13.57□□□□□ -0.24
GTF2A2-202ENST00000396060 RBSNQ9H1K0 784 aa13.57□□□□□ -0.24
GTF2A2-202ENST00000396060 FEM1BQ9UK73 627 aa13.57□□□□□ -0.24
GTF2A2-202ENST00000396060 GRIN3BO60391 1043 aa13.56□□□□□ -0.24
GTF2A2-202ENST00000396060 CAVIN2O95810 425 aa13.56□□□□□ -0.24
GTF2A2-202ENST00000396060 CCDC192P0DO97 292 aa13.56□□□□□ -0.24
GTF2A2-202ENST00000396060 PRPHP41219 470 aa13.56□□□□□ -0.24
GTF2A2-202ENST00000396060 PTGDRQ13258 359 aa13.56□□□□□ -0.24
GTF2A2-202ENST00000396060 NOL9Q5SY16 702 aaKnown RBP13.56□□□□□ -0.24
GTF2A2-202ENST00000396060 DPY19L2Q6NUT2 758 aa13.56□□□□□ -0.24
GTF2A2-202ENST00000396060 RASGRP4Q8TDF6 673 aa13.56□□□□□ -0.24
GTF2A2-202ENST00000396060 ZC3H15Q8WU90 426 aaKnown RBP13.56□□□□□ -0.24
GTF2A2-202ENST00000396060 CUL5Q93034 780 aa13.56□□□□□ -0.24
GTF2A2-202ENST00000396060 CLIC6Q96NY7 704 aa13.56□□□□□ -0.24
GTF2A2-202ENST00000396060 NUP88Q99567 741 aaPredicted RBP13.56□□□□□ -0.24
GTF2A2-202ENST00000396060 GGA3Q9NZ52 723 aa13.56□□□□□ -0.24
GTF2A2-202ENST00000396060 PRR12Q9ULL5 1215 aa13.56□□□□□ -0.24
GTF2A2-202ENST00000396060 ATP2B1P20020 1258 aa13.55□□□□□ -0.24
GTF2A2-202ENST00000396060 SYKP43405 635 aa13.55□□□□□ -0.24
GTF2A2-202ENST00000396060 STAT2P52630 851 aa13.55□□□□□ -0.24
GTF2A2-202ENST00000396060 CAMK4Q16566 473 aa13.55□□□□□ -0.24
GTF2A2-202ENST00000396060 UVSSAQ2YD98 709 aa13.55□□□□□ -0.24
GTF2A2-202ENST00000396060 TPRNQ4KMQ1 711 aa13.55□□□□□ -0.24
GTF2A2-202ENST00000396060 USP50Q70EL3 339 aaPredicted RBP13.55□□□□□ -0.24
GTF2A2-202ENST00000396060 FBXO11Q86XK2 927 aa13.55□□□□□ -0.24
GTF2A2-202ENST00000396060 SCYL3Q8IZE3 742 aa13.55□□□□□ -0.24
GTF2A2-202ENST00000396060 KLRG1Q96E93 195 aa13.55□□□□□ -0.24
GTF2A2-202ENST00000396060 RANBP17Q9H2T7 1088 aaKnown RBP13.55□□□□□ -0.24
GTF2A2-202ENST00000396060 PSTPIP2Q9H939 334 aa13.55□□□□□ -0.24
GTF2A2-202ENST00000396060 FAM13BQ9NYF5 915 aa13.55□□□□□ -0.24
GTF2A2-202ENST00000396060 KCNH3Q9ULD8 1083 aa13.55□□□□□ -0.24
GTF2A2-202ENST00000396060 PCDHA1Q9Y5I3 950 aa13.55□□□□□ -0.24
GTF2A2-202ENST00000396060 ATAD5Q96QE3 1844 aa13.55□□□□□ -0.24
GTF2A2-202ENST00000396060 WDR46O15213 610 aaKnown RBP13.54□□□□□ -0.24
GTF2A2-202ENST00000396060 USP14P54578 494 aa13.54□□□□□ -0.24
GTF2A2-202ENST00000396060 INF2Q27J81 1249 aa13.54□□□□□ -0.24
GTF2A2-202ENST00000396060 FAM83BQ5T0W9 1011 aa13.54□□□□□ -0.24
GTF2A2-202ENST00000396060 NEK8Q86SG6 692 aa13.54□□□□□ -0.24
GTF2A2-202ENST00000396060 POLR2AP24928 1970 aaKnown RBP13.54□□□□□ -0.24
GTF2A2-202ENST00000396060 RAD21O60216 631 aa13.54□□□□□ -0.24
GTF2A2-202ENST00000396060 INPP5BP32019 993 aa13.54□□□□□ -0.24
GTF2A2-202ENST00000396060 LONP1P36776 959 aaKnown RBP13.54□□□□□ -0.24
GTF2A2-202ENST00000396060 GRIN1Q05586 938 aa13.54□□□□□ -0.24
GTF2A2-202ENST00000396060 AP3B2Q13367 1082 aa13.54□□□□□ -0.24
GTF2A2-202ENST00000396060 NAP1L4Q99733 375 aaKnown RBP13.54□□□□□ -0.24
GTF2A2-202ENST00000396060 SDF4Q9BRK5 362 aa13.54□□□□□ -0.24
GTF2A2-202ENST00000396060 GLIS2Q9BZE0 524 aaPredicted RBP13.54□□□□□ -0.24
GTF2A2-202ENST00000396060 CSRNP2Q9H175 543 aa13.54□□□□□ -0.24
GTF2A2-202ENST00000396060 AS3MTQ9HBK9 375 aa13.54□□□□□ -0.24
GTF2A2-202ENST00000396060 BIN2Q9UBW5 565 aaPredicted RBP13.54□□□□□ -0.24
GTF2A2-202ENST00000396060 USP25Q9UHP3 1055 aa13.54□□□□□ -0.24
GTF2A2-202ENST00000396060 SCAF8Q9UPN6 1271 aaKnown RBP13.54□□□□□ -0.24
GTF2A2-202ENST00000396060 PIK3CDO00329 1044 aa13.53□□□□□ -0.24
GTF2A2-202ENST00000396060 EDIL3O43854 480 aa13.53□□□□□ -0.24
GTF2A2-202ENST00000396060 FOSP01100 380 aaPredicted RBP13.53□□□□□ -0.24
GTF2A2-202ENST00000396060 MCM7P33993 719 aa13.53□□□□□ -0.24
GTF2A2-202ENST00000396060 TYRO3Q06418 890 aa13.53□□□□□ -0.24
GTF2A2-202ENST00000396060 JAKMIP3Q5VZ66 844 aa13.53□□□□□ -0.24
GTF2A2-202ENST00000396060 PPP4R3AQ6IN85 833 aa13.53□□□□□ -0.24
GTF2A2-202ENST00000396060 KANK3Q6NY19 840 aa13.53□□□□□ -0.24
GTF2A2-202ENST00000396060 KRBA2Q6ZNG9 492 aa13.53□□□□□ -0.24
GTF2A2-202ENST00000396060 SPICE1Q8N0Z3 855 aa13.53□□□□□ -0.24
GTF2A2-202ENST00000396060 TBCKQ8TEA7 893 aa13.53□□□□□ -0.24
GTF2A2-202ENST00000396060 C12orf42Q96LP6 360 aa13.53□□□□□ -0.24
GTF2A2-202ENST00000396060 PYM1Q9BRP8 204 aaKnown RBP13.53□□□□□ -0.24
GTF2A2-202ENST00000396060 PNMA2Q9UL42 364 aa13.53□□□□□ -0.24
GTF2A2-202ENST00000396060 DOCK1Q14185 1865 aa13.53□□□□□ -0.24
GTF2A2-202ENST00000396060 SSC5DA1L4H1 1573 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms