RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 CTAGE5O15320 804 aa17.34■□□□□ 0.37
SCAF11-204ENST00000395454 USP14P54578 494 aa17.34■□□□□ 0.37
SCAF11-204ENST00000395454 KLRC3Q07444 240 aa17.34■□□□□ 0.37
SCAF11-204ENST00000395454 GRM4Q14833 912 aa17.34■□□□□ 0.37
SCAF11-204ENST00000395454 RASGRP2Q7LDG7 609 aa17.34■□□□□ 0.37
SCAF11-204ENST00000395454 RASAL3Q86YV0 1011 aa17.34■□□□□ 0.37
SCAF11-204ENST00000395454 SRBD1Q8N5C6 995 aaKnown RBP17.34■□□□□ 0.37
SCAF11-204ENST00000395454 MRPS27Q92552 414 aaKnown RBP17.34■□□□□ 0.37
SCAF11-204ENST00000395454 KIAA1683Q9H0B3 1180 aa17.34■□□□□ 0.37
SCAF11-204ENST00000395454 VCPKMTQ9H867 229 aa17.34■□□□□ 0.37
SCAF11-204ENST00000395454 PTPRFP10586 1907 aa17.34■□□□□ 0.37
SCAF11-204ENST00000395454 C19orf81C9J6K1 198 aa17.33■□□□□ 0.37
SCAF11-204ENST00000395454 CCDC192P0DO97 292 aa17.33■□□□□ 0.37
SCAF11-204ENST00000395454 ZBTB48P10074 688 aaPredicted RBP17.33■□□□□ 0.37
SCAF11-204ENST00000395454 XBP1P17861 261 aa17.33■□□□□ 0.37
SCAF11-204ENST00000395454 AKAP17AQ02040 695 aaKnown RBP17.33■□□□□ 0.37
SCAF11-204ENST00000395454 SPRYD7Q5W111 196 aa17.33■□□□□ 0.37
SCAF11-204ENST00000395454 CCDC73Q6ZRK6 1079 aa17.33■□□□□ 0.37
SCAF11-204ENST00000395454 FMR1NBQ8N0W7 255 aaPredicted RBP17.33■□□□□ 0.37
SCAF11-204ENST00000395454 HHIPL1Q96JK4 782 aa17.33■□□□□ 0.37
SCAF11-204ENST00000395454 SYNPO2Q9UMS6 1093 aa17.33■□□□□ 0.37
SCAF11-204ENST00000395454 BTBD18B2RXH4 712 aa17.33■□□□□ 0.36
SCAF11-204ENST00000395454 NDUFB10O96000 172 aa17.33■□□□□ 0.36
SCAF11-204ENST00000395454 HTRA3P83110 453 aa17.33■□□□□ 0.36
SCAF11-204ENST00000395454 RILPL1Q5EBL4 403 aa17.33■□□□□ 0.36
SCAF11-204ENST00000395454 SLFN13Q68D06 897 aa17.33■□□□□ 0.36
SCAF11-204ENST00000395454 FAM177A1Q8N128 213 aaPredicted RBP17.33■□□□□ 0.36
SCAF11-204ENST00000395454 GMCL1P1Q8NEA9 526 aa17.33■□□□□ 0.36
SCAF11-204ENST00000395454 TMOD4Q9NZQ9 345 aa17.33■□□□□ 0.36
SCAF11-204ENST00000395454 KCNH4Q9UQ05 1017 aa17.33■□□□□ 0.36
SCAF11-204ENST00000395454 CXCL11O14625 94 aa17.32■□□□□ 0.36
SCAF11-204ENST00000395454 CMA1P23946 247 aa17.32■□□□□ 0.36
SCAF11-204ENST00000395454 SLC1A4P43007 532 aa17.32■□□□□ 0.36
SCAF11-204ENST00000395454 GNAQP50148 359 aa17.32■□□□□ 0.36
SCAF11-204ENST00000395454 TOB1P50616 345 aaPredicted RBP17.32■□□□□ 0.36
SCAF11-204ENST00000395454 SNAPC2Q13487 334 aa17.32■□□□□ 0.36
SCAF11-204ENST00000395454 SF3A1Q15459 793 aaKnown RBP17.32■□□□□ 0.36
SCAF11-204ENST00000395454 NPY5RQ15761 445 aa17.32■□□□□ 0.36
SCAF11-204ENST00000395454 DEFB115Q30KQ5 88 aa17.32■□□□□ 0.36
SCAF11-204ENST00000395454 KIAA1755Q5JYT7 1200 aa17.32■□□□□ 0.36
SCAF11-204ENST00000395454 CYP4F22Q6NT55 531 aa17.32■□□□□ 0.36
SCAF11-204ENST00000395454 USP17L2Q6R6M4 530 aa17.32■□□□□ 0.36
SCAF11-204ENST00000395454 JMYQ8N9B5 988 aa17.32■□□□□ 0.36
SCAF11-204ENST00000395454 FSIP1Q8NA03 581 aa17.32■□□□□ 0.36
SCAF11-204ENST00000395454 ANP32BQ92688 251 aaKnown RBP17.32■□□□□ 0.36
SCAF11-204ENST00000395454 EMILIN3Q9NT22 766 aa17.32■□□□□ 0.36
SCAF11-204ENST00000395454 KCNJ14Q9UNX9 436 aa17.32■□□□□ 0.36
SCAF11-204ENST00000395454 V9GY48 417 aaPredicted RBP17.32■□□□□ 0.36
SCAF11-204ENST00000395454 A0A0G2JLL6 359 aaPredicted RBP17.31■□□□□ 0.36
SCAF11-204ENST00000395454 SLC10A3P09131 477 aa17.31■□□□□ 0.36
SCAF11-204ENST00000395454 PDHBP11177 359 aa17.31■□□□□ 0.36
SCAF11-204ENST00000395454 C1QTNF8P60827 252 aa17.31■□□□□ 0.36
SCAF11-204ENST00000395454 GNL2Q13823 731 aaKnown RBP17.31■□□□□ 0.36
SCAF11-204ENST00000395454 PFKFB3Q16875 520 aaPredicted RBP17.31■□□□□ 0.36
SCAF11-204ENST00000395454 PRRT2Q7Z6L0 340 aaPredicted RBP17.31■□□□□ 0.36
SCAF11-204ENST00000395454 CCDC82Q8N4S0 544 aa17.31■□□□□ 0.36
SCAF11-204ENST00000395454 LPAR1Q92633 364 aa17.31■□□□□ 0.36
SCAF11-204ENST00000395454 TNFRSF25Q93038 417 aa17.31■□□□□ 0.36
SCAF11-204ENST00000395454 CCDC102AQ96A19 550 aa17.31■□□□□ 0.36
SCAF11-204ENST00000395454 BAZ2BQ9UIF8 2168 aaKnown RBP17.31■□□□□ 0.36
SCAF11-204ENST00000395454 PALM3A6NDB9 673 aaPredicted RBP17.31■□□□□ 0.36
SCAF11-204ENST00000395454 RASSF10A6NK89 507 aa17.31■□□□□ 0.36
SCAF11-204ENST00000395454 GTF2A2P52657 109 aa17.31■□□□□ 0.36
SCAF11-204ENST00000395454 NUP88Q99567 741 aaPredicted RBP17.31■□□□□ 0.36
SCAF11-204ENST00000395454 MAD2L2Q9UI95 211 aa17.31■□□□□ 0.36
SCAF11-204ENST00000395454 FRMPD2Q68DX3 1309 aaPredicted RBP17.3■□□□□ 0.36
SCAF11-204ENST00000395454 GOLGA8HP0CJ92 632 aa17.3■□□□□ 0.36
SCAF11-204ENST00000395454 SCG2P13521 617 aa17.3■□□□□ 0.36
SCAF11-204ENST00000395454 VCAM1P19320 739 aa17.3■□□□□ 0.36
SCAF11-204ENST00000395454 TYRO3Q06418 890 aa17.3■□□□□ 0.36
SCAF11-204ENST00000395454 CCDC96Q2M329 555 aa17.3■□□□□ 0.36
SCAF11-204ENST00000395454 TPRNQ4KMQ1 711 aa17.3■□□□□ 0.36
SCAF11-204ENST00000395454 SH3D19Q5HYK7 790 aa17.3■□□□□ 0.36
SCAF11-204ENST00000395454 GADL1Q6ZQY3 521 aa17.3■□□□□ 0.36
SCAF11-204ENST00000395454 KCTD1Q719H9 257 aa17.3■□□□□ 0.36
SCAF11-204ENST00000395454 LZTS2Q9BRK4 669 aa17.3■□□□□ 0.36
SCAF11-204ENST00000395454 SH3GLB2Q9NR46 395 aa17.3■□□□□ 0.36
SCAF11-204ENST00000395454 HPSEQ9Y251 543 aa17.3■□□□□ 0.36
SCAF11-204ENST00000395454 FAM155AB1AL88 458 aaPredicted RBP17.29■□□□□ 0.36
SCAF11-204ENST00000395454 CAVIN2O95810 425 aa17.29■□□□□ 0.36
SCAF11-204ENST00000395454 PARP1P09874 1014 aaKnown RBP17.29■□□□□ 0.36
SCAF11-204ENST00000395454 SMARCA1P28370 1054 aa17.29■□□□□ 0.36
SCAF11-204ENST00000395454 CAMK4Q16566 473 aa17.29■□□□□ 0.36
SCAF11-204ENST00000395454 FAM83BQ5T0W9 1011 aa17.29■□□□□ 0.36
SCAF11-204ENST00000395454 RNF214Q8ND24 703 aa17.29■□□□□ 0.36
SCAF11-204ENST00000395454 GMCL1Q96IK5 515 aa17.29■□□□□ 0.36
SCAF11-204ENST00000395454 MS4A4AQ96JQ5 239 aa17.29■□□□□ 0.36
SCAF11-204ENST00000395454 VPS54Q9P1Q0 977 aa17.29■□□□□ 0.36
SCAF11-204ENST00000395454 MRVI1Q9Y6F6 885 aa17.29■□□□□ 0.36
SCAF11-204ENST00000395454 CCL15-CCL14A0A0B4J2E2 113 aa17.29■□□□□ 0.36
SCAF11-204ENST00000395454 KINO60870 393 aaKnown RBP17.29■□□□□ 0.36
SCAF11-204ENST00000395454 SNHG28P0DPA3 235 aa17.29■□□□□ 0.36
SCAF11-204ENST00000395454 BMP3P12645 472 aa17.29■□□□□ 0.36
SCAF11-204ENST00000395454 KRT2P35908 639 aa17.29■□□□□ 0.36
SCAF11-204ENST00000395454 NR5A1Q13285 461 aa17.29■□□□□ 0.36
SCAF11-204ENST00000395454 CCL15Q16663 113 aa17.29■□□□□ 0.36
SCAF11-204ENST00000395454 OXER1Q8TDS5 423 aa17.29■□□□□ 0.36
SCAF11-204ENST00000395454 DCAF4Q8WV16 495 aa17.29■□□□□ 0.36
SCAF11-204ENST00000395454 C12orf42Q96LP6 360 aa17.29■□□□□ 0.36
SCAF11-204ENST00000395454 TANGO6Q9C0B7 1094 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms