RNA–Protein interactions for RNA: ENST00000394987.4

C15orf39-202, Transcript of chromosome 15 open reading frame 39, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene C15orf39, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C15orf39-202ENST00000394987 NOD1Q9Y239 953 aa15.1■□□□□ 0.01
C15orf39-202ENST00000394987 EPB41P11171 864 aaKnown RBP15.09■□□□□ 0.01
C15orf39-202ENST00000394987 SMTNP53814 917 aa15.09■□□□□ 0.01
C15orf39-202ENST00000394987 DPY19L2Q6NUT2 758 aa15.09■□□□□ 0.01
C15orf39-202ENST00000394987 HDXQ7Z353 690 aa15.09■□□□□ 0.01
C15orf39-202ENST00000394987 LRRC8AQ8IWT6 810 aa15.09■□□□□ 0.01
C15orf39-202ENST00000394987 TDRD7Q8NHU6 1098 aaKnown RBP15.09■□□□□ 0.01
C15orf39-202ENST00000394987 NELFBQ8WX92 580 aa15.09■□□□□ 0.01
C15orf39-202ENST00000394987 RTEL1Q9NZ71 1219 aa15.09■□□□□ 0.01
C15orf39-202ENST00000394987 NLRP12P59046 1061 aa15.09■□□□□ 0.01
C15orf39-202ENST00000394987 STRBPQ96SI9 672 aaKnown RBP15.09■□□□□ 0.01
C15orf39-202ENST00000394987 BSDC1Q9NW68 430 aaPredicted RBP15.09■□□□□ 0.01
C15orf39-202ENST00000394987 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.09■□□□□ 0.01
C15orf39-202ENST00000394987 CDHR2Q9BYE9 1310 aa15.09■□□□□ 0.01
C15orf39-202ENST00000394987 MED23Q9ULK4 1368 aa15.09■□□□□ 0.01
C15orf39-202ENST00000394987 KDM6AO15550 1401 aaPredicted RBP15.09■□□□□ 0.01
C15orf39-202ENST00000394987 MCM3P25205 808 aa15.09■□□□□ 0.01
C15orf39-202ENST00000394987 GLT8D2Q9H1C3 349 aa15.09■□□□□ 0.01
C15orf39-202ENST00000394987 IFI16Q16666 785 aaKnown RBP15.08■□□□□ 0.01
C15orf39-202ENST00000394987 NEK8Q86SG6 692 aa15.08■□□□□ 0.01
C15orf39-202ENST00000394987 NLRX1Q86UT6 975 aa15.08■□□□□ 0.01
C15orf39-202ENST00000394987 ZNF354CQ86Y25 554 aa15.08■□□□□ 0.01
C15orf39-202ENST00000394987 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.08■□□□□ 0.015e-6■■■■□ 22
C15orf39-202ENST00000394987 CEP112Q8N8E3 955 aa15.08■□□□□ 0
C15orf39-202ENST00000394987 PCDHA5Q9Y5H7 936 aa15.08■□□□□ 0
C15orf39-202ENST00000394987 CC2D2BQ6DHV5 1058 aa15.08■□□□□ 0
C15orf39-202ENST00000394987 GADL1Q6ZQY3 521 aa15.08■□□□□ 0
C15orf39-202ENST00000394987 ANKRD35Q8N283 1001 aa15.08■□□□□ 0
C15orf39-202ENST00000394987 NAP1L4Q99733 375 aaKnown RBP15.08■□□□□ 0
C15orf39-202ENST00000394987 MAP3K9P80192 1104 aa15.08■□□□□ 0
C15orf39-202ENST00000394987 CCDC50Q8IVM0 306 aa15.08■□□□□ 0
C15orf39-202ENST00000394987 KAZALD1Q96I82 304 aa15.08■□□□□ 0
C15orf39-202ENST00000394987 IFT74Q96LB3 600 aa15.08■□□□□ 0
C15orf39-202ENST00000394987 TAOK3Q9H2K8 898 aa15.08■□□□□ 0
C15orf39-202ENST00000394987 ZCCHC17Q9NP64 241 aaKnown RBP15.08■□□□□ 0
C15orf39-202ENST00000394987 SNAP25P60880 206 aa15.07■□□□□ 0
C15orf39-202ENST00000394987 GRAMD1CQ8IYS0 662 aa15.07■□□□□ 0
C15orf39-202ENST00000394987 PAIP2Q9BPZ3 127 aaKnown RBP15.07■□□□□ 0
C15orf39-202ENST00000394987 SLC39A2Q9NP94 309 aa15.07■□□□□ 0
C15orf39-202ENST00000394987 C11orf57Q6ZUT1 292 aaPredicted RBP15.07■□□□□ 0
C15orf39-202ENST00000394987 FAM76AQ8TAV0 307 aa15.07■□□□□ 0
C15orf39-202ENST00000394987 PIGSQ96S52 555 aa15.07■□□□□ 0
C15orf39-202ENST00000394987 HNRNPH2P55795 449 aaKnown RBP15.07■□□□□ 0
C15orf39-202ENST00000394987 GPBP1Q86WP2 473 aa15.07■□□□□ 0
C15orf39-202ENST00000394987 SMYD4Q8IYR2 804 aaPredicted RBP15.06■□□□□ 0
C15orf39-202ENST00000394987 LINC00116Q8NCU8 138 aa15.06■□□□□ 0
C15orf39-202ENST00000394987 SLF1Q9BQI6 1058 aa15.06■□□□□ 0
C15orf39-202ENST00000394987 AZI2Q9H6S1 392 aa15.06■□□□□ 0
C15orf39-202ENST00000394987 SUGCTQ9HAC7 445 aa15.06■□□□□ 0
C15orf39-202ENST00000394987 FANCLQ9NW38 375 aa15.06■□□□□ 0
C15orf39-202ENST00000394987 TXNRD1Q16881 649 aa15.06■□□□□ 0
C15orf39-202ENST00000394987 SYMPKQ92797 1274 aaKnown RBP15.06■□□□□ 0
C15orf39-202ENST00000394987 MRFAP1L1Q96HT8 127 aa15.06■□□□□ 0
C15orf39-202ENST00000394987 CCPG1Q9ULG6 757 aa15.06■□□□□ 0
C15orf39-202ENST00000394987 ATP6V0A2Q9Y487 856 aa15.06■□□□□ 0
C15orf39-202ENST00000394987 FRMD3A2A2Y4 597 aa15.06■□□□□ 0
C15orf39-202ENST00000394987 OR52Z1P0C646 297 aa15.06■□□□□ 0
C15orf39-202ENST00000394987 CYP2J2P51589 502 aa15.06■□□□□ 0
C15orf39-202ENST00000394987 MKRN3Q13064 507 aaKnown RBP15.06■□□□□ 0
C15orf39-202ENST00000394987 NFIXQ14938 502 aa15.06■□□□□ 0
C15orf39-202ENST00000394987 PTPROQ16827 1216 aa15.06■□□□□ 0
C15orf39-202ENST00000394987 ARHGAP44Q17R89 818 aa15.06■□□□□ 0
C15orf39-202ENST00000394987 KSR1Q8IVT5 923 aa15.06■□□□□ 0
C15orf39-202ENST00000394987 RPAP1Q9BWH6 1393 aaPredicted RBP15.06■□□□□ 0
C15orf39-202ENST00000394987 SPATA31A6Q5VVP1 1343 aa15.06■□□□□ 0
C15orf39-202ENST00000394987 CACNB1Q02641 598 aaPredicted RBP15.06■□□□□ 0
C15orf39-202ENST00000394987 BARGINQ6ZT62 677 aa15.06■□□□□ 0
C15orf39-202ENST00000394987 CPLX4Q7Z7G2 160 aa15.06■□□□□ 0
C15orf39-202ENST00000394987 TDRD3Q9H7E2 651 aaKnown RBP15.06■□□□□ 0
C15orf39-202ENST00000394987 RIPOR2Q9Y4F9 1068 aa15.06■□□□□ 0
C15orf39-202ENST00000394987 CARMIL3Q8ND23 1372 aa15.05■□□□□ 0
C15orf39-202ENST00000394987 CAMTA2O94983 1202 aa15.05■□□□□ 0
C15orf39-202ENST00000394987 EN1Q05925 392 aaPredicted RBP15.05■□□□□ 0
C15orf39-202ENST00000394987 CCDC121Q6ZUS5 278 aa15.05■□□□□ 0
C15orf39-202ENST00000394987 AFAP1L1Q8TED9 768 aa15.05■□□□□ 0
C15orf39-202ENST00000394987 PLVAPQ9BX97 442 aa15.05■□□□□ 0
C15orf39-202ENST00000394987 ST7Q9NRC1 585 aa15.05■□□□□ 0
C15orf39-202ENST00000394987 SPTLC3Q9NUV7 552 aa15.05■□□□□ 0
C15orf39-202ENST00000394987 NMT2O60551 498 aa15.05■□□□□ -0
C15orf39-202ENST00000394987 CMA1P23946 247 aa15.05■□□□□ -0
C15orf39-202ENST00000394987 INPP5BP32019 993 aa15.05■□□□□ -0
C15orf39-202ENST00000394987 ARHGEF16Q5VV41 709 aa15.05■□□□□ -0
C15orf39-202ENST00000394987 NCAPG2Q86XI2 1143 aa15.05■□□□□ -0
C15orf39-202ENST00000394987 CSRNP2Q9H175 543 aa15.05■□□□□ -0
C15orf39-202ENST00000394987 RBM6P78332 1123 aaKnown RBP15.05■□□□□ -0
C15orf39-202ENST00000394987 MIER3Q7Z3K6 550 aa15.05■□□□□ -0
C15orf39-202ENST00000394987 ZNF34Q8IZ26 560 aa15.05■□□□□ -0
C15orf39-202ENST00000394987 TTLL6Q8N841 843 aa15.05■□□□□ -0
C15orf39-202ENST00000394987 SH3RF3Q8TEJ3 882 aaPredicted RBP15.05■□□□□ -0
C15orf39-202ENST00000394987 TUBB4AP04350 444 aa15.04■□□□□ -0
C15orf39-202ENST00000394987 EZRP15311 586 aaKnown RBP15.04■□□□□ -0
C15orf39-202ENST00000394987 FBXO38Q6PIJ6 1188 aa15.04■□□□□ -0
C15orf39-202ENST00000394987 CCDC25Q86WR0 208 aa15.04■□□□□ -0
C15orf39-202ENST00000394987 PLA2G4DQ86XP0 818 aa15.04■□□□□ -0
C15orf39-202ENST00000394987 METTL13Q8N6R0 699 aa15.04■□□□□ -0
C15orf39-202ENST00000394987 SELENOOQ9BVL4 669 aa15.04■□□□□ -0
C15orf39-202ENST00000394987 EPC1Q9H2F5 836 aa15.04■□□□□ -0
C15orf39-202ENST00000394987 CD209Q9NNX6 404 aa15.04■□□□□ -0
C15orf39-202ENST00000394987 PRDM4Q9UKN5 801 aa15.04■□□□□ -0
C15orf39-202ENST00000394987 GRIPAP1Q4V328 841 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms