RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 LAMB2P55268 1798 aa15.65■□□□□ 0.1
GAPVD1-205ENST00000394084 SCN7AQ01118 1682 aa15.65■□□□□ 0.1
GAPVD1-205ENST00000394084 CYTH3O43739 400 aa15.65■□□□□ 0.1
GAPVD1-205ENST00000394084 PIP4K2BP78356 416 aa15.65■□□□□ 0.1
GAPVD1-205ENST00000394084 DIXDC1Q155Q3 683 aa15.65■□□□□ 0.1
GAPVD1-205ENST00000394084 TSR1Q2NL82 804 aaKnown RBP15.65■□□□□ 0.1
GAPVD1-205ENST00000394084 TXLNBQ8N3L3 684 aa15.65■□□□□ 0.1
GAPVD1-205ENST00000394084 SH3RF3Q8TEJ3 882 aaPredicted RBP15.65■□□□□ 0.1
GAPVD1-205ENST00000394084 CAPZA3Q96KX2 299 aa15.65■□□□□ 0.1
GAPVD1-205ENST00000394084 PCMTD1Q96MG8 357 aaPredicted RBP15.65■□□□□ 0.1
GAPVD1-205ENST00000394084 MAD2L2Q9UI95 211 aa15.65■□□□□ 0.1
GAPVD1-205ENST00000394084 PSMA7O14818 248 aa15.65■□□□□ 0.1
GAPVD1-205ENST00000394084 AMPD2Q01433 879 aa15.65■□□□□ 0.1
GAPVD1-205ENST00000394084 STIM1Q13586 685 aa15.65■□□□□ 0.1
GAPVD1-205ENST00000394084 TUBB2AQ13885 445 aa15.65■□□□□ 0.1
GAPVD1-205ENST00000394084 CCDC178Q5BJE1 867 aa15.65■□□□□ 0.1
GAPVD1-205ENST00000394084 CCDC122Q5T0U0 273 aa15.65■□□□□ 0.1
GAPVD1-205ENST00000394084 HNRNPLLQ8WVV9 542 aaKnown RBP15.65■□□□□ 0.1
GAPVD1-205ENST00000394084 NLRP3Q96P20 1036 aa15.65■□□□□ 0.1
GAPVD1-205ENST00000394084 TUBB2BQ9BVA1 445 aa15.65■□□□□ 0.1
GAPVD1-205ENST00000394084 AGPAT5Q9NUQ2 364 aa15.65■□□□□ 0.1
GAPVD1-205ENST00000394084 SAP30BPQ9UHR5 308 aaKnown RBP15.65■□□□□ 0.1
GAPVD1-205ENST00000394084 L1RE1Q9UN81 338 aa15.65■□□□□ 0.1
GAPVD1-205ENST00000394084 TSPY3P0CV98 308 aa15.64■□□□□ 0.09
GAPVD1-205ENST00000394084 TSPY8P0CW00 308 aa15.64■□□□□ 0.09
GAPVD1-205ENST00000394084 HERVK_113P62684 666 aa15.64■□□□□ 0.09
GAPVD1-205ENST00000394084 C12orf60Q5U649 245 aa15.64■□□□□ 0.09
GAPVD1-205ENST00000394084 WDR59Q6PJI9 974 aa15.64■□□□□ 0.09
GAPVD1-205ENST00000394084 MYO1AQ9UBC5 1043 aa15.64■□□□□ 0.09
GAPVD1-205ENST00000394084 PHACTR2O75167 634 aa15.64■□□□□ 0.09
GAPVD1-205ENST00000394084 ATP1A1P05023 1023 aaKnown RBP15.64■□□□□ 0.09
GAPVD1-205ENST00000394084 GRM4Q14833 912 aa15.64■□□□□ 0.09
GAPVD1-205ENST00000394084 KIAA1328Q86T90 577 aa15.64■□□□□ 0.09
GAPVD1-205ENST00000394084 NBPF5PQ86XG9 351 aaPredicted RBP15.64■□□□□ 0.09
GAPVD1-205ENST00000394084 CSGALNACT2Q8N6G5 542 aa15.64■□□□□ 0.09
GAPVD1-205ENST00000394084 ZNF507Q8TCN5 953 aa15.64■□□□□ 0.09
GAPVD1-205ENST00000394084 LETM2Q2VYF4 491 aa15.63■□□□□ 0.09
GAPVD1-205ENST00000394084 DGKHQ86XP1 1220 aa15.63■□□□□ 0.09
GAPVD1-205ENST00000394084 GPIHBP1Q8IV16 184 aa15.63■□□□□ 0.09
GAPVD1-205ENST00000394084 CDCA7Q9BWT1 371 aaPredicted RBP15.63■□□□□ 0.09
GAPVD1-205ENST00000394084 PLCG1P19174 1290 aa15.63■□□□□ 0.09
GAPVD1-205ENST00000394084 TRIM21P19474 475 aaKnown RBP15.63■□□□□ 0.09
GAPVD1-205ENST00000394084 EEF1GP26641 437 aaKnown RBP15.63■□□□□ 0.09
GAPVD1-205ENST00000394084 CASP8Q14790 479 aa15.63■□□□□ 0.09
GAPVD1-205ENST00000394084 GRIK5Q16478 980 aa15.63■□□□□ 0.09
GAPVD1-205ENST00000394084 TGFBRAP1Q8WUH2 860 aa15.63■□□□□ 0.09
GAPVD1-205ENST00000394084 HPS3Q969F9 1004 aa15.63■□□□□ 0.09
GAPVD1-205ENST00000394084 CCDC102AQ96A19 550 aa15.63■□□□□ 0.09
GAPVD1-205ENST00000394084 TUBGCP2Q9BSJ2 902 aa15.63■□□□□ 0.09
GAPVD1-205ENST00000394084 PDS5AQ29RF7 1337 aaKnown RBP15.63■□□□□ 0.09
GAPVD1-205ENST00000394084 NUTM2BA6NNL0 878 aaPredicted RBP15.63■□□□□ 0.09
GAPVD1-205ENST00000394084 NUTM2EB1AL46 878 aaPredicted RBP15.63■□□□□ 0.09
GAPVD1-205ENST00000394084 M0R2N6 131 aa15.63■□□□□ 0.09
GAPVD1-205ENST00000394084 PDE4DQ08499 809 aa15.63■□□□□ 0.09
GAPVD1-205ENST00000394084 TTI2Q6NXR4 508 aa15.63■□□□□ 0.09
GAPVD1-205ENST00000394084 GIMAP8Q8ND71 665 aaPredicted RBP15.63■□□□□ 0.09
GAPVD1-205ENST00000394084 DNAJC7Q99615 494 aa15.63■□□□□ 0.09
GAPVD1-205ENST00000394084 SH3GLB2Q9NR46 395 aa15.63■□□□□ 0.09
GAPVD1-205ENST00000394084 CAPN11Q9UMQ6 739 aa15.63■□□□□ 0.09
GAPVD1-205ENST00000394084 FAN1Q9Y2M0 1017 aa15.63■□□□□ 0.09
GAPVD1-205ENST00000394084 STXBP3O00186 592 aa15.62■□□□□ 0.09
GAPVD1-205ENST00000394084 NKRFO15226 690 aaKnown RBP eCLIP15.62■□□□□ 0.09
GAPVD1-205ENST00000394084 CABP7Q86V35 215 aa15.62■□□□□ 0.09
GAPVD1-205ENST00000394084 MAPKAPK5Q8IW41 473 aa15.62■□□□□ 0.09
GAPVD1-205ENST00000394084 ZNF444Q8N0Y2 327 aaPredicted RBP15.62■□□□□ 0.09
GAPVD1-205ENST00000394084 CCDC148Q8NFR7 591 aa15.62■□□□□ 0.09
GAPVD1-205ENST00000394084 GPR101Q96P66 508 aaPredicted RBP15.62■□□□□ 0.09
GAPVD1-205ENST00000394084 MMS19Q96T76 1030 aa15.62■□□□□ 0.09
GAPVD1-205ENST00000394084 DUSP9Q99956 384 aaKnown RBP15.62■□□□□ 0.09
GAPVD1-205ENST00000394084 THAP9Q9H5L6 903 aa15.62■□□□□ 0.09
GAPVD1-205ENST00000394084 HAUS4Q9H6D7 363 aa15.62■□□□□ 0.09
GAPVD1-205ENST00000394084 VAT1LQ9HCJ6 419 aa15.62■□□□□ 0.09
GAPVD1-205ENST00000394084 KBTBD4Q9NVX7 518 aa15.62■□□□□ 0.09
GAPVD1-205ENST00000394084 COL16A1Q07092 1604 aaPredicted RBP15.62■□□□□ 0.09
GAPVD1-205ENST00000394084 RHOBTB3O94955 611 aa15.62■□□□□ 0.09
GAPVD1-205ENST00000394084 FCER1AP12319 257 aa15.62■□□□□ 0.09
GAPVD1-205ENST00000394084 ASIC1P78348 528 aa15.62■□□□□ 0.09
GAPVD1-205ENST00000394084 TBC1D8BQ0IIM8 1120 aa15.62■□□□□ 0.09
GAPVD1-205ENST00000394084 KCNB1Q14721 858 aa15.62■□□□□ 0.09
GAPVD1-205ENST00000394084 TXNRD1Q16881 649 aa15.62■□□□□ 0.09
GAPVD1-205ENST00000394084 SMARCC1Q92922 1105 aaPredicted RBP15.62■□□□□ 0.09
GAPVD1-205ENST00000394084 SETDB2Q96T68 719 aa15.62■□□□□ 0.09
GAPVD1-205ENST00000394084 TMEM47Q9BQJ4 181 aa15.62■□□□□ 0.09
GAPVD1-205ENST00000394084 ANKRD2Q9GZV1 360 aa15.62■□□□□ 0.09
GAPVD1-205ENST00000394084 A0A1W2PQC6 194 aa15.61■□□□□ 0.09
GAPVD1-205ENST00000394084 RCCD1A6NED2 376 aa15.61■□□□□ 0.09
GAPVD1-205ENST00000394084 CCNT1O60563 726 aaKnown RBP15.61■□□□□ 0.09
GAPVD1-205ENST00000394084 EIF3JO75822 258 aaKnown RBP15.61■□□□□ 0.09
GAPVD1-205ENST00000394084 MTIF2P46199 727 aaKnown RBP15.61■□□□□ 0.09
GAPVD1-205ENST00000394084 NAPAP54920 295 aa15.61■□□□□ 0.09
GAPVD1-205ENST00000394084 CYP27A1Q02318 531 aa15.61■□□□□ 0.09
GAPVD1-205ENST00000394084 STK4Q13043 487 aa15.61■□□□□ 0.09
GAPVD1-205ENST00000394084 ANKRD40Q6AI12 368 aa15.61■□□□□ 0.09
GAPVD1-205ENST00000394084 TRAPPC11Q7Z392 1133 aa15.61■□□□□ 0.09
GAPVD1-205ENST00000394084 JAKMIP2Q96AA8 810 aa15.61■□□□□ 0.09
GAPVD1-205ENST00000394084 LACRTQ9GZZ8 138 aa15.61■□□□□ 0.09
GAPVD1-205ENST00000394084 EXOC1Q9NV70 894 aa15.61■□□□□ 0.09
GAPVD1-205ENST00000394084 BARHL2Q9NY43 387 aa15.61■□□□□ 0.09
GAPVD1-205ENST00000394084 LDHBP07195 334 aaKnown RBP15.61■□□□□ 0.09
GAPVD1-205ENST00000394084 DNM2P50570 870 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms