RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 APTXQ7Z2E3 356 aaKnown RBP16.17■□□□□ 0.18
MKS1-203ENST00000393120 HOMER1Q86YM7 354 aa16.17■□□□□ 0.18
MKS1-203ENST00000393120 CTAGE1Q96RT6 745 aa16.17■□□□□ 0.18
MKS1-203ENST00000393120 IDI2Q9BXS1 227 aa16.17■□□□□ 0.18
MKS1-203ENST00000393120 UBA5Q9GZZ9 404 aa16.17■□□□□ 0.18
MKS1-203ENST00000393120 VAT1LQ9HCJ6 419 aa16.17■□□□□ 0.18
MKS1-203ENST00000393120 RWDD2AQ9UIY3 292 aa16.17■□□□□ 0.18
MKS1-203ENST00000393120 CTIFO43310 598 aaKnown RBP16.16■□□□□ 0.18
MKS1-203ENST00000393120 RPN1P04843 607 aaKnown RBP16.16■□□□□ 0.18
MKS1-203ENST00000393120 OR52Z1P0C646 297 aa16.16■□□□□ 0.18
MKS1-203ENST00000393120 NAALADL2Q58DX5 795 aa16.16■□□□□ 0.18
MKS1-203ENST00000393120 DACT2Q5SW24 774 aa16.16■□□□□ 0.18
MKS1-203ENST00000393120 GPATCH4Q5T3I0 446 aaKnown RBP16.16■□□□□ 0.18
MKS1-203ENST00000393120 RRAGBQ5VZM2 374 aa16.16■□□□□ 0.18
MKS1-203ENST00000393120 FCHSD1Q86WN1 690 aa16.16■□□□□ 0.18
MKS1-203ENST00000393120 REXO1Q8N1G1 1221 aaKnown RBP16.16■□□□□ 0.18
MKS1-203ENST00000393120 CNKSR1Q969H4 720 aa16.16■□□□□ 0.18
MKS1-203ENST00000393120 KBTBD4Q9NVX7 518 aa16.16■□□□□ 0.18
MKS1-203ENST00000393120 PNMA6FA0A0J9YX94 578 aa16.15■□□□□ 0.18
MKS1-203ENST00000393120 LRRC10BA6NIK2 292 aa16.15■□□□□ 0.18
MKS1-203ENST00000393120 KCNB1Q14721 858 aa16.15■□□□□ 0.18
MKS1-203ENST00000393120 KARSQ15046 597 aaKnown RBP16.15■□□□□ 0.18
MKS1-203ENST00000393120 MTERF4Q7Z6M4 381 aaKnown RBP16.15■□□□□ 0.18
MKS1-203ENST00000393120 MAP7D2Q96T17 732 aa16.15■□□□□ 0.18
MKS1-203ENST00000393120 BLZF1Q9H2G9 400 aa16.15■□□□□ 0.18
MKS1-203ENST00000393120 LRRC47Q8N1G4 583 aaKnown RBP16.15■□□□□ 0.18
MKS1-203ENST00000393120 C7orf43Q8WVR3 580 aa16.15■□□□□ 0.18
MKS1-203ENST00000393120 STAMQ92783 540 aa16.15■□□□□ 0.18
MKS1-203ENST00000393120 MKL1Q969V6 931 aa16.15■□□□□ 0.18
MKS1-203ENST00000393120 DBNDD1Q9H9R9 158 aa16.15■□□□□ 0.18
MKS1-203ENST00000393120 FRMPD2Q68DX3 1309 aaPredicted RBP16.14■□□□□ 0.17
MKS1-203ENST00000393120 CCNT1O60563 726 aaKnown RBP16.14■□□□□ 0.17
MKS1-203ENST00000393120 RXRBP28702 533 aa16.14■□□□□ 0.17
MKS1-203ENST00000393120 CDC25AP30304 524 aa16.14■□□□□ 0.17
MKS1-203ENST00000393120 ADCY7P51828 1080 aa16.14■□□□□ 0.17
MKS1-203ENST00000393120 NFIAQ12857 509 aa16.14■□□□□ 0.17
MKS1-203ENST00000393120 LETM2Q2VYF4 491 aa16.14■□□□□ 0.17
MKS1-203ENST00000393120 MSL1Q68DK7 614 aa16.14■□□□□ 0.17
MKS1-203ENST00000393120 CC2D2BQ6DHV5 1058 aa16.14■□□□□ 0.17
MKS1-203ENST00000393120 TBCKQ8TEA7 893 aa16.14■□□□□ 0.17
MKS1-203ENST00000393120 MTMR8Q96EF0 704 aa16.14■□□□□ 0.17
MKS1-203ENST00000393120 TRMT1Q9NXH9 659 aaKnown RBP16.14■□□□□ 0.17
MKS1-203ENST00000393120 ADD3Q9UEY8 706 aaKnown RBP16.14■□□□□ 0.17
MKS1-203ENST00000393120 SERPINA10Q9UK55 444 aa16.14■□□□□ 0.17
MKS1-203ENST00000393120 RGPD3A6NKT7 1758 aaPredicted RBP16.14■□□□□ 0.17
MKS1-203ENST00000393120 RGPD4Q7Z3J3 1758 aa16.14■□□□□ 0.17
MKS1-203ENST00000393120 KLHL10Q6JEL2 608 aa16.13■□□□□ 0.17
MKS1-203ENST00000393120 TMEM139Q8IV31 216 aa16.13■□□□□ 0.17
MKS1-203ENST00000393120 SMYD4Q8IYR2 804 aaPredicted RBP16.13■□□□□ 0.17
MKS1-203ENST00000393120 PPP1R13BQ96KQ4 1090 aa16.13■□□□□ 0.17
MKS1-203ENST00000393120 GTPBP4Q9BZE4 634 aaKnown RBP16.13■□□□□ 0.17
MKS1-203ENST00000393120 JMJD4Q9H9V9 463 aa16.13■□□□□ 0.17
MKS1-203ENST00000393120 KCNQ5Q9NR82 932 aa16.13■□□□□ 0.17
MKS1-203ENST00000393120 PI4KBQ9UBF8 816 aa16.13■□□□□ 0.17
MKS1-203ENST00000393120 ARHGAP6O43182 974 aa16.13■□□□□ 0.17
MKS1-203ENST00000393120 ECE2O60344 883 aa16.13■□□□□ 0.17
MKS1-203ENST00000393120 STX10O60499 249 aa16.13■□□□□ 0.17
MKS1-203ENST00000393120 PBX1P40424 430 aa16.13■□□□□ 0.17
MKS1-203ENST00000393120 SPAG1Q07617 926 aa16.13■□□□□ 0.17
MKS1-203ENST00000393120 SYCP1Q15431 976 aa16.13■□□□□ 0.17
MKS1-203ENST00000393120 HSP90AA4PQ58FG1 418 aa16.13■□□□□ 0.17
MKS1-203ENST00000393120 ADGRF4Q8IZF3 695 aa16.13■□□□□ 0.17
MKS1-203ENST00000393120 IGSF22Q8N9C0 903 aa16.13■□□□□ 0.17
MKS1-203ENST00000393120 MTMR9Q96QG7 549 aa16.13■□□□□ 0.17
MKS1-203ENST00000393120 GPCPD1Q9NPB8 672 aa16.13■□□□□ 0.17
MKS1-203ENST00000393120 RIC8AQ9NPQ8 531 aa16.13■□□□□ 0.17
MKS1-203ENST00000393120 NYAP2Q9P242 653 aa16.13■□□□□ 0.17
MKS1-203ENST00000393120 BIN2Q9UBW5 565 aaPredicted RBP16.13■□□□□ 0.17
MKS1-203ENST00000393120 GREB1LQ9C091 1923 aaPredicted RBP16.13■□□□□ 0.17
MKS1-203ENST00000393120 PP2D1A8MPX8 630 aa16.12■□□□□ 0.17
MKS1-203ENST00000393120 EIF6P56537 245 aaKnown RBP16.12■□□□□ 0.17
MKS1-203ENST00000393120 STX17P56962 302 aa16.12■□□□□ 0.17
MKS1-203ENST00000393120 PAK1Q13153 545 aa16.12■□□□□ 0.17
MKS1-203ENST00000393120 TATDN1Q6P1N9 297 aa16.12■□□□□ 0.17
MKS1-203ENST00000393120 CABP7Q86V35 215 aa16.12■□□□□ 0.17
MKS1-203ENST00000393120 KIAA0825Q8IV33 1275 aa16.12■□□□□ 0.17
MKS1-203ENST00000393120 ZFPM1Q8IX07 1006 aa16.12■□□□□ 0.17
MKS1-203ENST00000393120 TC2NQ8N9U0 490 aa16.12■□□□□ 0.17
MKS1-203ENST00000393120 KIF18AQ8NI77 898 aa16.12■□□□□ 0.17
MKS1-203ENST00000393120 PDCL3Q9H2J4 239 aa16.12■□□□□ 0.17
MKS1-203ENST00000393120 DNAJC18Q9H819 358 aa16.12■□□□□ 0.17
MKS1-203ENST00000393120 KANSL2Q9H9L4 492 aa16.12■□□□□ 0.17
MKS1-203ENST00000393120 LIMA1Q9UHB6 759 aaKnown RBP16.12■□□□□ 0.17
MKS1-203ENST00000393120 KLRC4O43908 158 aa16.11■□□□□ 0.17
MKS1-203ENST00000393120 RHOBTB3O94955 611 aa16.11■□□□□ 0.17
MKS1-203ENST00000393120 CLK2P49760 499 aaKnown RBP16.11■□□□□ 0.17
MKS1-203ENST00000393120 FILIP1LQ4L180 1135 aa16.11■□□□□ 0.17
MKS1-203ENST00000393120 JAKMIP3Q5VZ66 844 aa16.11■□□□□ 0.17
MKS1-203ENST00000393120 ADSSL1Q8N142 457 aa16.11■□□□□ 0.17
MKS1-203ENST00000393120 COA7Q96BR5 231 aa16.11■□□□□ 0.17
MKS1-203ENST00000393120 FAM198AQ9UFP1 575 aa16.11■□□□□ 0.17
MKS1-203ENST00000393120 CTNND2Q9UQB3 1225 aa16.11■□□□□ 0.17
MKS1-203ENST00000393120 H7C1D1 291 aa16.11■□□□□ 0.17
MKS1-203ENST00000393120 ZBTB5O15062 677 aa16.11■□□□□ 0.17
MKS1-203ENST00000393120 FXR2P51116 673 aaKnown RBP eCLIP16.11■□□□□ 0.17
MKS1-203ENST00000393120 HSP90AA2PQ14568 343 aaPredicted RBP16.11■□□□□ 0.17
MKS1-203ENST00000393120 CLEC10AQ8IUN9 316 aa16.11■□□□□ 0.17
MKS1-203ENST00000393120 SUPT20HQ8NEM7 779 aa16.11■□□□□ 0.17
MKS1-203ENST00000393120 RASSF8Q8NHQ8 419 aa16.11■□□□□ 0.17
MKS1-203ENST00000393120 NELFBQ8WX92 580 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms