RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 RIOX1Q9H6W3 641 aa29.49■■■□□ 2.31
HOMER3-202ENST00000392351 NCOA5Q9HCD5 579 aaKnown RBP29.49■■■□□ 2.31
HOMER3-202ENST00000392351 RAVER2Q9HCJ3 691 aaKnown RBP29.49■■■□□ 2.31
HOMER3-202ENST00000392351 HSPA8P11142 646 aaKnown RBP29.48■■■□□ 2.31
HOMER3-202ENST00000392351 ADD1P35611 737 aaKnown RBP29.48■■■□□ 2.31
HOMER3-202ENST00000392351 CDC37Q16543 378 aaPredicted RBP29.48■■■□□ 2.31
HOMER3-202ENST00000392351 FKTNO75072 461 aa29.47■■■□□ 2.31
HOMER3-202ENST00000392351 ECM2O94769 699 aaPredicted RBP29.47■■■□□ 2.31
HOMER3-202ENST00000392351 STAT3P40763 770 aa29.47■■■□□ 2.31
HOMER3-202ENST00000392351 CTCFP49711 727 aaPredicted RBP29.47■■■□□ 2.31
HOMER3-202ENST00000392351 OAZ1P54368 228 aa29.47■■■□□ 2.31
HOMER3-202ENST00000392351 CCNA1P78396 465 aa29.47■■■□□ 2.31
HOMER3-202ENST00000392351 SNRNP48Q6IEG0 339 aaKnown RBP29.47■■■□□ 2.31
HOMER3-202ENST00000392351 TEX13BQ9BXU2 312 aa29.47■■■□□ 2.31
HOMER3-202ENST00000392351 SLKQ9H2G2 1235 aaPredicted RBP29.47■■■□□ 2.31
HOMER3-202ENST00000392351 LIMCH1Q9UPQ0 1083 aa29.47■■■□□ 2.31
HOMER3-202ENST00000392351 ZNF536O15090 1300 aa29.47■■■□□ 2.31
HOMER3-202ENST00000392351 ATP2A1O14983 1001 aa29.47■■■□□ 2.31
HOMER3-202ENST00000392351 LARGE1O95461 756 aa29.47■■■□□ 2.31
HOMER3-202ENST00000392351 SMARCA1P28370 1054 aa29.47■■■□□ 2.31
HOMER3-202ENST00000392351 LACTBP83111 547 aaPredicted RBP29.47■■■□□ 2.31
HOMER3-202ENST00000392351 ME3Q16798 604 aa29.47■■■□□ 2.31
HOMER3-202ENST00000392351 HOMER1Q86YM7 354 aa29.47■■■□□ 2.31
HOMER3-202ENST00000392351 MOV10L1Q9BXT6 1211 aaKnown RBP29.47■■■□□ 2.31
HOMER3-202ENST00000392351 SLC4A3P48751 1232 aa29.46■■■□□ 2.31
HOMER3-202ENST00000392351 PIBF1Q8WXW3 757 aa29.46■■■□□ 2.31
HOMER3-202ENST00000392351 AGBL1Q96MI9 1066 aa29.46■■■□□ 2.31
HOMER3-202ENST00000392351 PORCNQ9H237 461 aa29.46■■■□□ 2.31
HOMER3-202ENST00000392351 PFKFB2O60825 505 aa29.45■■■□□ 2.31
HOMER3-202ENST00000392351 LBX1P52954 281 aa29.45■■■□□ 2.31
HOMER3-202ENST00000392351 QRICH1Q2TAL8 776 aa29.45■■■□□ 2.31
HOMER3-202ENST00000392351 CCAR1Q8IX12 1150 aaKnown RBP29.45■■■□□ 2.31
HOMER3-202ENST00000392351 DOCK3Q8IZD9 2030 aa29.45■■■□□ 2.31
HOMER3-202ENST00000392351 MTMR8Q96EF0 704 aa29.45■■■□□ 2.31
HOMER3-202ENST00000392351 PIGSQ96S52 555 aa29.45■■■□□ 2.31
HOMER3-202ENST00000392351 CNTNAP5Q8WYK1 1306 aa29.45■■■□□ 2.3
HOMER3-202ENST00000392351 CD2BP2O95400 341 aaKnown RBP29.44■■■□□ 2.3
HOMER3-202ENST00000392351 ICAM1P05362 532 aa29.44■■■□□ 2.3
HOMER3-202ENST00000392351 SCRN1Q12765 414 aa29.44■■■□□ 2.3
HOMER3-202ENST00000392351 KIF22Q14807 665 aa29.44■■■□□ 2.3
HOMER3-202ENST00000392351 RIOX2Q8IUF8 465 aa29.44■■■□□ 2.3
HOMER3-202ENST00000392351 CCPG1Q9ULG6 757 aa29.44■■■□□ 2.3
HOMER3-202ENST00000392351 ZBTB5O15062 677 aa29.43■■■□□ 2.3
HOMER3-202ENST00000392351 FUT2Q10981 343 aa29.43■■■□□ 2.3
HOMER3-202ENST00000392351 CD99L2Q8TCZ2 262 aa29.43■■■□□ 2.3
HOMER3-202ENST00000392351 RRP36Q96EU6 259 aaKnown RBP29.43■■■□□ 2.3
HOMER3-202ENST00000392351 ARHGAP39Q9C0H5 1083 aa29.43■■■□□ 2.3
HOMER3-202ENST00000392351 EFCC1Q9HA90 598 aa29.43■■■□□ 2.3
HOMER3-202ENST00000392351 PLXNB2O15031 1838 aa29.43■■■□□ 2.3
HOMER3-202ENST00000392351 CPLX1O14810 134 aa29.43■■■□□ 2.3
HOMER3-202ENST00000392351 ERCC3P19447 782 aa29.43■■■□□ 2.3
HOMER3-202ENST00000392351 WDR78Q5VTH9 848 aa29.43■■■□□ 2.3
HOMER3-202ENST00000392351 NCAPG2Q86XI2 1143 aa29.43■■■□□ 2.3
HOMER3-202ENST00000392351 NECAB1Q8N987 351 aa29.43■■■□□ 2.3
HOMER3-202ENST00000392351 ERO1AQ96HE7 468 aa29.43■■■□□ 2.3
HOMER3-202ENST00000392351 RIPK3Q9Y572 518 aa29.43■■■□□ 2.3
HOMER3-202ENST00000392351 SLC25A27O95847 323 aa29.42■■■□□ 2.3
HOMER3-202ENST00000392351 TAL1P17542 331 aaPredicted RBP29.42■■■□□ 2.3
HOMER3-202ENST00000392351 MAPK4P31152 587 aa29.42■■■□□ 2.3
HOMER3-202ENST00000392351 SHCBP1Q8NEM2 672 aa29.42■■■□□ 2.3
HOMER3-202ENST00000392351 HOMER2Q9NSB8 354 aa29.42■■■□□ 2.3
HOMER3-202ENST00000392351 SEC63Q9UGP8 760 aaKnown RBP29.42■■■□□ 2.3
HOMER3-202ENST00000392351 hCG_1642624A0A1W2PR95 340 aa29.41■■■□□ 2.3
HOMER3-202ENST00000392351 CTGFP29279 349 aa29.41■■■□□ 2.3
HOMER3-202ENST00000392351 PSMC4P43686 418 aa29.41■■■□□ 2.3
HOMER3-202ENST00000392351 NTRK3Q16288 839 aa29.41■■■□□ 2.3
HOMER3-202ENST00000392351 USH1GQ495M9 461 aa29.41■■■□□ 2.3
HOMER3-202ENST00000392351 GTF3C6Q969F1 213 aa29.41■■■□□ 2.3
HOMER3-202ENST00000392351 ZSCAN31Q96LW9 406 aaPredicted RBP29.41■■■□□ 2.3
HOMER3-202ENST00000392351 CWC22Q9HCG8 908 aaKnown RBP29.41■■■□□ 2.3
HOMER3-202ENST00000392351 PNMA6FA0A0J9YX94 578 aa29.4■■■□□ 2.3
HOMER3-202ENST00000392351 ALAS1P13196 640 aa29.4■■■□□ 2.3
HOMER3-202ENST00000392351 COPB2P35606 906 aa29.4■■■□□ 2.3
HOMER3-202ENST00000392351 FCGRTP55899 365 aa29.4■■■□□ 2.3
HOMER3-202ENST00000392351 CAP1Q01518 475 aa29.4■■■□□ 2.3
HOMER3-202ENST00000392351 FBXO11Q86XK2 927 aa29.4■■■□□ 2.3
HOMER3-202ENST00000392351 MROH8Q9H579 483 aa29.4■■■□□ 2.3
HOMER3-202ENST00000392351 PNMA2Q9UL42 364 aa29.4■■■□□ 2.3
HOMER3-202ENST00000392351 PPP1R11O60927 126 aaPredicted RBP29.39■■■□□ 2.3
HOMER3-202ENST00000392351 PPFIA3O75145 1194 aa29.39■■■□□ 2.3
HOMER3-202ENST00000392351 FMNL1O95466 1100 aaPredicted RBP29.39■■■□□ 2.3
HOMER3-202ENST00000392351 IFNAR1P17181 557 aa29.39■■■□□ 2.3
HOMER3-202ENST00000392351 MCM2P49736 904 aa29.39■■■□□ 2.3
HOMER3-202ENST00000392351 CPLX2Q6PUV4 134 aaKnown RBP29.39■■■□□ 2.3
HOMER3-202ENST00000392351 PHKBQ93100 1093 aa29.39■■■□□ 2.3
HOMER3-202ENST00000392351 TRIM47Q96LD4 638 aa29.39■■■□□ 2.3
HOMER3-202ENST00000392351 AMNQ9BXJ7 453 aa29.39■■■□□ 2.3
HOMER3-202ENST00000392351 ZNFX1Q9P2E3 1918 aaKnown RBP29.39■■■□□ 2.3
HOMER3-202ENST00000392351 TNPO2O14787 897 aaKnown RBP29.39■■■□□ 2.29
HOMER3-202ENST00000392351 GPR142Q7Z601 462 aa29.39■■■□□ 2.29
HOMER3-202ENST00000392351 SH2B1Q9NRF2 756 aaPredicted RBP29.39■■■□□ 2.29
HOMER3-202ENST00000392351 V9GY48 417 aaPredicted RBP29.39■■■□□ 2.29
HOMER3-202ENST00000392351 TKFCQ3LXA3 575 aa29.38■■■□□ 2.29
HOMER3-202ENST00000392351 TRERF1Q96PN7 1200 aa29.38■■■□□ 2.29
HOMER3-202ENST00000392351 RNF146Q9NTX7 359 aa29.38■■■□□ 2.29
HOMER3-202ENST00000392351 RBBP6Q7Z6E9 1792 aaKnown RBP29.38■■■□□ 2.29
HOMER3-202ENST00000392351 PLEKHH3Q7Z736 793 aa29.37■■■□□ 2.29
HOMER3-202ENST00000392351 SLC26A6Q9BXS9 759 aa29.37■■■□□ 2.29
HOMER3-202ENST00000392351 IVNS1ABPQ9Y6Y0 642 aa29.37■■■□□ 2.29
HOMER3-202ENST00000392351 CDKL5O76039 1030 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms