RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 CYTH3O43739 400 aa17.32■□□□□ 0.36
SUMO1-203ENST00000392246 PLEKHA8P1O95397 391 aa17.32■□□□□ 0.36
SUMO1-203ENST00000392246 SNAP25P60880 206 aa17.32■□□□□ 0.36
SUMO1-203ENST00000392246 CCDC174Q6PII3 467 aa17.32■□□□□ 0.36
SUMO1-203ENST00000392246 TMTC3Q6ZXV5 915 aa17.32■□□□□ 0.36
SUMO1-203ENST00000392246 MOV10L1Q9BXT6 1211 aaKnown RBP17.32■□□□□ 0.36
SUMO1-203ENST00000392246 RAVER2Q9HCJ3 691 aaKnown RBP17.32■□□□□ 0.36
SUMO1-203ENST00000392246 FAM217BQ9NTX9 383 aaPredicted RBP17.32■□□□□ 0.36
SUMO1-203ENST00000392246 PNMA2Q9UL42 364 aa17.32■□□□□ 0.36
SUMO1-203ENST00000392246 MGAMO43451 1857 aa17.32■□□□□ 0.36
SUMO1-203ENST00000392246 SLC25A27O95847 323 aa17.31■□□□□ 0.36
SUMO1-203ENST00000392246 CDC27P30260 824 aa17.31■□□□□ 0.36
SUMO1-203ENST00000392246 MAPK4P31152 587 aa17.31■□□□□ 0.36
SUMO1-203ENST00000392246 COPB2P35606 906 aa17.31■□□□□ 0.36
SUMO1-203ENST00000392246 ADD1P35611 737 aaKnown RBP17.31■□□□□ 0.36
SUMO1-203ENST00000392246 CCT2P78371 535 aaKnown RBP17.31■□□□□ 0.36
SUMO1-203ENST00000392246 ARHGEF6Q15052 776 aa17.31■□□□□ 0.36
SUMO1-203ENST00000392246 CDC37Q16543 378 aaPredicted RBP17.31■□□□□ 0.36
SUMO1-203ENST00000392246 SLC35G1Q2M3R5 365 aa17.31■□□□□ 0.36
SUMO1-203ENST00000392246 SNRNP48Q6IEG0 339 aaKnown RBP17.31■□□□□ 0.36
SUMO1-203ENST00000392246 NOL8Q76FK4 1167 aaKnown RBP17.31■□□□□ 0.36
SUMO1-203ENST00000392246 RIOX2Q8IUF8 465 aa17.31■□□□□ 0.36
SUMO1-203ENST00000392246 CMTR1Q8N1G2 835 aaKnown RBP17.31■□□□□ 0.36
SUMO1-203ENST00000392246 SHCBP1Q8NEM2 672 aa17.31■□□□□ 0.36
SUMO1-203ENST00000392246 MTMR8Q96EF0 704 aa17.31■□□□□ 0.36
SUMO1-203ENST00000392246 SLKQ9H2G2 1235 aaPredicted RBP17.31■□□□□ 0.36
SUMO1-203ENST00000392246 LIMCH1Q9UPQ0 1083 aa17.31■□□□□ 0.36
SUMO1-203ENST00000392246 ZNF536O15090 1300 aa17.31■□□□□ 0.36
SUMO1-203ENST00000392246 ICAM1P05362 532 aa17.31■□□□□ 0.36
SUMO1-203ENST00000392246 PSMC4P43686 418 aa17.31■□□□□ 0.36
SUMO1-203ENST00000392246 FCGRTP55899 365 aa17.31■□□□□ 0.36
SUMO1-203ENST00000392246 STK3Q13188 491 aa17.31■□□□□ 0.36
SUMO1-203ENST00000392246 CD99L2Q8TCZ2 262 aa17.31■□□□□ 0.36
SUMO1-203ENST00000392246 AGBL1Q96MI9 1066 aa17.31■□□□□ 0.36
SUMO1-203ENST00000392246 PORCNQ9H237 461 aa17.31■□□□□ 0.36
SUMO1-203ENST00000392246 MROH8Q9H579 483 aa17.31■□□□□ 0.36
SUMO1-203ENST00000392246 SMCHD1A6NHR9 2005 aa17.3■□□□□ 0.36
SUMO1-203ENST00000392246 DOCK3Q8IZD9 2030 aa17.3■□□□□ 0.36
SUMO1-203ENST00000392246 ZBTB5O15062 677 aa17.3■□□□□ 0.36
SUMO1-203ENST00000392246 PFKFB2O60825 505 aa17.3■□□□□ 0.36
SUMO1-203ENST00000392246 ERCC3P19447 782 aa17.3■□□□□ 0.36
SUMO1-203ENST00000392246 SLC4A3P48751 1232 aa17.3■□□□□ 0.36
SUMO1-203ENST00000392246 QRICH1Q2TAL8 776 aa17.3■□□□□ 0.36
SUMO1-203ENST00000392246 NCAPG2Q86XI2 1143 aa17.3■□□□□ 0.36
SUMO1-203ENST00000392246 CCDC82Q8N4S0 544 aa17.3■□□□□ 0.36
SUMO1-203ENST00000392246 RRP36Q96EU6 259 aaKnown RBP17.3■□□□□ 0.36
SUMO1-203ENST00000392246 PIGSQ96S52 555 aa17.3■□□□□ 0.36
SUMO1-203ENST00000392246 EFCC1Q9HA90 598 aa17.3■□□□□ 0.36
SUMO1-203ENST00000392246 CWC22Q9HCG8 908 aaKnown RBP17.3■□□□□ 0.36
SUMO1-203ENST00000392246 CCPG1Q9ULG6 757 aa17.3■□□□□ 0.36
SUMO1-203ENST00000392246 PNMA6FA0A0J9YX94 578 aa17.29■□□□□ 0.36
SUMO1-203ENST00000392246 ECM2O94769 699 aaPredicted RBP17.29■□□□□ 0.36
SUMO1-203ENST00000392246 FMNL1O95466 1100 aaPredicted RBP17.29■□□□□ 0.36
SUMO1-203ENST00000392246 ME3Q16798 604 aa17.29■□□□□ 0.36
SUMO1-203ENST00000392246 TKFCQ3LXA3 575 aa17.29■□□□□ 0.36
SUMO1-203ENST00000392246 WDR78Q5VTH9 848 aa17.29■□□□□ 0.36
SUMO1-203ENST00000392246 HOMER1Q86YM7 354 aa17.29■□□□□ 0.36
SUMO1-203ENST00000392246 ZSCAN31Q96LW9 406 aaPredicted RBP17.29■□□□□ 0.36
SUMO1-203ENST00000392246 ARHGAP39Q9C0H5 1083 aa17.29■□□□□ 0.36
SUMO1-203ENST00000392246 NCOA5Q9HCD5 579 aaKnown RBP17.29■□□□□ 0.36
SUMO1-203ENST00000392246 SEC63Q9UGP8 760 aaKnown RBP17.29■□□□□ 0.36
SUMO1-203ENST00000392246 RIPK3Q9Y572 518 aa17.29■□□□□ 0.36
SUMO1-203ENST00000392246 TNPO2O14787 897 aaKnown RBP17.28■□□□□ 0.36
SUMO1-203ENST00000392246 CPLX1O14810 134 aa17.28■□□□□ 0.36
SUMO1-203ENST00000392246 GNRH1P01148 92 aa17.28■□□□□ 0.36
SUMO1-203ENST00000392246 CTGFP29279 349 aa17.28■□□□□ 0.36
SUMO1-203ENST00000392246 MCM2P49736 904 aa17.28■□□□□ 0.36
SUMO1-203ENST00000392246 FUT2Q10981 343 aa17.28■□□□□ 0.36
SUMO1-203ENST00000392246 SCRN1Q12765 414 aa17.28■□□□□ 0.36
SUMO1-203ENST00000392246 TRAF1Q13077 416 aa17.28■□□□□ 0.36
SUMO1-203ENST00000392246 CPLX2Q6PUV4 134 aaKnown RBP17.28■□□□□ 0.36
SUMO1-203ENST00000392246 GPR142Q7Z601 462 aa17.28■□□□□ 0.36
SUMO1-203ENST00000392246 FBXO11Q86XK2 927 aa17.28■□□□□ 0.36
SUMO1-203ENST00000392246 CHST13Q8NET6 341 aa17.28■□□□□ 0.36
SUMO1-203ENST00000392246 COA7Q96BR5 231 aa17.28■□□□□ 0.36
SUMO1-203ENST00000392246 TRIM47Q96LD4 638 aa17.28■□□□□ 0.36
SUMO1-203ENST00000392246 AMNQ9BXJ7 453 aa17.28■□□□□ 0.36
SUMO1-203ENST00000392246 PRDM10Q9NQV6 1147 aa17.28■□□□□ 0.36
SUMO1-203ENST00000392246 ALAS1P13196 640 aa17.27■□□□□ 0.36
SUMO1-203ENST00000392246 IFNAR1P17181 557 aa17.27■□□□□ 0.36
SUMO1-203ENST00000392246 HOXD10P28358 340 aa17.27■□□□□ 0.36
SUMO1-203ENST00000392246 NTRK3Q16288 839 aa17.27■□□□□ 0.36
SUMO1-203ENST00000392246 PLEKHH3Q7Z736 793 aa17.27■□□□□ 0.36
SUMO1-203ENST00000392246 PIBF1Q8WXW3 757 aa17.27■□□□□ 0.36
SUMO1-203ENST00000392246 TRERF1Q96PN7 1200 aa17.27■□□□□ 0.36
SUMO1-203ENST00000392246 FBXO40Q9UH90 709 aa17.27■□□□□ 0.36
SUMO1-203ENST00000392246 IVNS1ABPQ9Y6Y0 642 aa17.27■□□□□ 0.36
SUMO1-203ENST00000392246 CNTNAP5Q8WYK1 1306 aa17.27■□□□□ 0.36
SUMO1-203ENST00000392246 ZSWIM8A7E2V4 1837 aa17.27■□□□□ 0.36
SUMO1-203ENST00000392246 ZNFX1Q9P2E3 1918 aaKnown RBP17.27■□□□□ 0.35
SUMO1-203ENST00000392246 STRNO43815 780 aa17.26■□□□□ 0.35
SUMO1-203ENST00000392246 LARGE1O95461 756 aa17.26■□□□□ 0.35
SUMO1-203ENST00000392246 CAP1Q01518 475 aa17.26■□□□□ 0.35
SUMO1-203ENST00000392246 USH1GQ495M9 461 aa17.26■□□□□ 0.35
SUMO1-203ENST00000392246 GTF3C6Q969F1 213 aa17.26■□□□□ 0.35
SUMO1-203ENST00000392246 SH2B1Q9NRF2 756 aaPredicted RBP17.26■□□□□ 0.35
SUMO1-203ENST00000392246 HOMER2Q9NSB8 354 aa17.26■□□□□ 0.35
SUMO1-203ENST00000392246 RNF146Q9NTX7 359 aa17.26■□□□□ 0.35
SUMO1-203ENST00000392246 V9GY48 417 aaPredicted RBP17.26■□□□□ 0.35
SUMO1-203ENST00000392246 ABCB11O95342 1321 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms