RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 SMARCC1Q92922 1105 aaPredicted RBP20.18■□□□□ 0.82
ERCC2-201ENST00000391941 MYO1AQ9UBC5 1043 aa20.18■□□□□ 0.82
ERCC2-201ENST00000391941 INF2Q27J81 1249 aa20.17■□□□□ 0.82
ERCC2-201ENST00000391941 CCDC178Q5BJE1 867 aa20.17■□□□□ 0.82
ERCC2-201ENST00000391941 CADPS2Q86UW7 1296 aa20.17■□□□□ 0.82
ERCC2-201ENST00000391941 RIOK1Q9BRS2 568 aaKnown RBP20.17■□□□□ 0.82
ERCC2-201ENST00000391941 LRRC1Q9BTT6 524 aa20.17■□□□□ 0.82
ERCC2-201ENST00000391941 SAMM50Q9Y512 469 aa20.17■□□□□ 0.82
ERCC2-201ENST00000391941 BCL9LQ86UU0 1499 aa20.17■□□□□ 0.82
ERCC2-201ENST00000391941 BMP15O95972 392 aa20.17■□□□□ 0.82
ERCC2-201ENST00000391941 SND1Q7KZF4 910 aaKnown RBP eCLIP20.17■□□□□ 0.82
ERCC2-201ENST00000391941 IQCA1Q86XH1 822 aa20.17■□□□□ 0.82
ERCC2-201ENST00000391941 MSL3Q8N5Y2 521 aaKnown RBP20.17■□□□□ 0.82
ERCC2-201ENST00000391941 GOLGA6L1Q8N7Z2 621 aa20.17■□□□□ 0.82
ERCC2-201ENST00000391941 GBP3Q9H0R5 595 aa20.17■□□□□ 0.82
ERCC2-201ENST00000391941 IVLP07476 585 aa20.17■□□□□ 0.82
ERCC2-201ENST00000391941 KCNQ4P56696 695 aa20.17■□□□□ 0.82
ERCC2-201ENST00000391941 WDR93Q6P2C0 686 aa20.17■□□□□ 0.82
ERCC2-201ENST00000391941 TMC4Q7Z404 712 aa20.17■□□□□ 0.82
ERCC2-201ENST00000391941 ADSSL1Q8N142 457 aa20.17■□□□□ 0.82
ERCC2-201ENST00000391941 LGALS16A8MUM7 142 aa20.16■□□□□ 0.82
ERCC2-201ENST00000391941 PSMD14O00487 310 aa20.16■□□□□ 0.82
ERCC2-201ENST00000391941 MOCS3O95396 460 aa20.16■□□□□ 0.82
ERCC2-201ENST00000391941 GOLGA8HP0CJ92 632 aa20.16■□□□□ 0.82
ERCC2-201ENST00000391941 SCG2P13521 617 aa20.16■□□□□ 0.82
ERCC2-201ENST00000391941 NFRKBQ6P4R8 1299 aa20.16■□□□□ 0.82
ERCC2-201ENST00000391941 TUBGCP2Q9BSJ2 902 aa20.16■□□□□ 0.82
ERCC2-201ENST00000391941 FAM207AQ9NSI2 230 aaPredicted RBP20.16■□□□□ 0.82
ERCC2-201ENST00000391941 LIG3P49916 1009 aa20.16■□□□□ 0.82
ERCC2-201ENST00000391941 RNASE9P60153 205 aaKnown RBP20.16■□□□□ 0.82
ERCC2-201ENST00000391941 CCDC96Q2M329 555 aa20.16■□□□□ 0.82
ERCC2-201ENST00000391941 KCTD16Q68DU8 428 aa20.16■□□□□ 0.82
ERCC2-201ENST00000391941 CSGALNACT2Q8N6G5 542 aa20.16■□□□□ 0.82
ERCC2-201ENST00000391941 CCDC155Q8N6L0 562 aa20.16■□□□□ 0.82
ERCC2-201ENST00000391941 CTCFLQ8NI51 663 aaPredicted RBP20.16■□□□□ 0.82
ERCC2-201ENST00000391941 IPO4Q8TEX9 1081 aaKnown RBP20.16■□□□□ 0.82
ERCC2-201ENST00000391941 CRACR2AQ9BSW2 395 aa20.16■□□□□ 0.82
ERCC2-201ENST00000391941 TOGARAM1Q9Y4F4 1720 aa20.15■□□□□ 0.82
ERCC2-201ENST00000391941 SPAG1Q07617 926 aa20.15■□□□□ 0.82
ERCC2-201ENST00000391941 TBC1D8BQ0IIM8 1120 aa20.15■□□□□ 0.82
ERCC2-201ENST00000391941 PPP2R5BQ15173 497 aa20.15■□□□□ 0.82
ERCC2-201ENST00000391941 BRINP3Q76B58 766 aa20.15■□□□□ 0.82
ERCC2-201ENST00000391941 ZNF507Q8TCN5 953 aa20.15■□□□□ 0.82
ERCC2-201ENST00000391941 TFCP2L1Q9NZI6 479 aa20.15■□□□□ 0.82
ERCC2-201ENST00000391941 ZSCAN5CA6NGD5 496 aaPredicted RBP20.15■□□□□ 0.82
ERCC2-201ENST00000391941 STK4Q13043 487 aa20.15■□□□□ 0.82
ERCC2-201ENST00000391941 TRIM14Q14142 442 aa20.15■□□□□ 0.82
ERCC2-201ENST00000391941 PTPROQ16827 1216 aa20.15■□□□□ 0.82
ERCC2-201ENST00000391941 TSR1Q2NL82 804 aaKnown RBP20.15■□□□□ 0.82
ERCC2-201ENST00000391941 ANKRD40Q6AI12 368 aa20.15■□□□□ 0.82
ERCC2-201ENST00000391941 PAXIP1Q6ZW49 1069 aaPredicted RBP20.15■□□□□ 0.82
ERCC2-201ENST00000391941 SH2D3CQ8N5H7 860 aa20.15■□□□□ 0.82
ERCC2-201ENST00000391941 ESYT3A0FGR9 886 aa20.14■□□□□ 0.82
ERCC2-201ENST00000391941 MS4A14Q96JA4 679 aa20.14■□□□□ 0.82
ERCC2-201ENST00000391941 DNAJC7Q99615 494 aa20.14■□□□□ 0.82
ERCC2-201ENST00000391941 HAUS4Q9H6D7 363 aa20.14■□□□□ 0.82
ERCC2-201ENST00000391941 DISC1Q9NRI5 854 aa20.14■□□□□ 0.82
ERCC2-201ENST00000391941 COL1A1P02452 1464 aaPredicted RBP20.14■□□□□ 0.81
ERCC2-201ENST00000391941 IGHMBP2P38935 993 aaKnown RBP20.14■□□□□ 0.81
ERCC2-201ENST00000391941 BICDL1Q6ZP65 573 aa20.14■□□□□ 0.81
ERCC2-201ENST00000391941 C4orf32Q8N8J7 132 aa20.14■□□□□ 0.81
ERCC2-201ENST00000391941 DYNLL2Q96FJ2 89 aa20.14■□□□□ 0.81
ERCC2-201ENST00000391941 ACSBG1Q96GR2 724 aa20.14■□□□□ 0.81
ERCC2-201ENST00000391941 DUSP9Q99956 384 aaKnown RBP20.14■□□□□ 0.81
ERCC2-201ENST00000391941 MYH3P11055 1940 aa20.14■□□□□ 0.81
ERCC2-201ENST00000391941 KLRC4O43908 158 aa20.13■□□□□ 0.81
ERCC2-201ENST00000391941 HSPA2P54652 639 aa20.13■□□□□ 0.81
ERCC2-201ENST00000391941 TTC31Q49AM3 519 aaPredicted RBP20.13■□□□□ 0.81
ERCC2-201ENST00000391941 ZNF34Q8IZ26 560 aa20.13■□□□□ 0.81
ERCC2-201ENST00000391941 MICALL1Q8N3F8 863 aa20.13■□□□□ 0.81
ERCC2-201ENST00000391941 MED4Q9NPJ6 270 aa20.13■□□□□ 0.81
ERCC2-201ENST00000391941 CAPN11Q9UMQ6 739 aa20.13■□□□□ 0.81
ERCC2-201ENST00000391941 ENOX2Q16206 610 aaKnown RBP20.13■□□□□ 0.81
ERCC2-201ENST00000391941 CCNI2Q6ZMN8 369 aaPredicted RBP20.13■□□□□ 0.81
ERCC2-201ENST00000391941 TSEN2Q8NCE0 465 aaKnown RBP20.13■□□□□ 0.81
ERCC2-201ENST00000391941 PROCA1Q8NCQ7 364 aaPredicted RBP20.13■□□□□ 0.81
ERCC2-201ENST00000391941 KANSL2Q9H9L4 492 aa20.13■□□□□ 0.81
ERCC2-201ENST00000391941 SALL4Q9UJQ4 1053 aa20.13■□□□□ 0.81
ERCC2-201ENST00000391941 ANAPC4Q9UJX5 808 aa20.13■□□□□ 0.81
ERCC2-201ENST00000391941 MYH13Q9UKX3 1938 aa20.13■□□□□ 0.81
ERCC2-201ENST00000391941 SHANK3Q9BYB0 1731 aa20.13■□□□□ 0.81
ERCC2-201ENST00000391941 BUB1O43683 1085 aa20.13■□□□□ 0.81
ERCC2-201ENST00000391941 MTIF2P46199 727 aaKnown RBP20.13■□□□□ 0.81
ERCC2-201ENST00000391941 ATP1A2P50993 1020 aa20.13■□□□□ 0.81
ERCC2-201ENST00000391941 APBA1Q02410 837 aa20.13■□□□□ 0.81
ERCC2-201ENST00000391941 ARL8AQ96BM9 186 aa20.13■□□□□ 0.81
ERCC2-201ENST00000391941 MAGEC2Q9UBF1 373 aaPredicted RBP20.13■□□□□ 0.81
ERCC2-201ENST00000391941 NIP7Q9Y221 180 aaKnown RBP eCLIP20.13■□□□□ 0.81
ERCC2-201ENST00000391941 GOLGA6BA6NDN3 693 aa20.12■□□□□ 0.81
ERCC2-201ENST00000391941 TSPY2A6NKD2 308 aa20.12■□□□□ 0.81
ERCC2-201ENST00000391941 USP17L8P0C7I0 530 aa20.12■□□□□ 0.81
ERCC2-201ENST00000391941 SLC35G1Q2M3R5 365 aa20.12■□□□□ 0.81
ERCC2-201ENST00000391941 HEATR3Q7Z4Q2 680 aa20.12■□□□□ 0.81
ERCC2-201ENST00000391941 C2CD5Q86YS7 1000 aa20.12■□□□□ 0.81
ERCC2-201ENST00000391941 CNOT6LQ96LI5 555 aaKnown RBP20.12■□□□□ 0.81
ERCC2-201ENST00000391941 SLC39A2Q9NP94 309 aa20.12■□□□□ 0.81
ERCC2-201ENST00000391941 DOCK2Q92608 1830 aa20.12■□□□□ 0.81
ERCC2-201ENST00000391941 GOLGA6CA6NDK9 693 aa20.12■□□□□ 0.81
ERCC2-201ENST00000391941 H7C1D1 291 aa20.12■□□□□ 0.81
ERCC2-201ENST00000391941 GOLGA6DP0CG33 693 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms