RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 A0A1B0GTL3 188 aa3.42□□□□□ -1.86
SNORA40.19-201ENST00000390846 BPNT1O95861 308 aa3.42□□□□□ -1.86
SNORA40.19-201ENST00000390846 SYN1P17600 705 aa3.42□□□□□ -1.86
SNORA40.19-201ENST00000390846 GBP1P32455 592 aa3.42□□□□□ -1.86
SNORA40.19-201ENST00000390846 EIF4A3P38919 411 aaKnown RBP3.42□□□□□ -1.86
SNORA40.19-201ENST00000390846 TNNI2P48788 182 aa3.42□□□□□ -1.86
SNORA40.19-201ENST00000390846 PCBP3P57721 371 aaKnown RBP3.42□□□□□ -1.86
SNORA40.19-201ENST00000390846 PLEKHN1Q494U1 663 aaPredicted RBP3.42□□□□□ -1.86
SNORA40.19-201ENST00000390846 CRTC3Q6UUV7 619 aa3.42□□□□□ -1.86
SNORA40.19-201ENST00000390846 NLRC3Q7RTR2 1065 aa3.42□□□□□ -1.86
SNORA40.19-201ENST00000390846 ZDHHC14Q8IZN3 488 aa3.42□□□□□ -1.86
SNORA40.19-201ENST00000390846 FAM177A1Q8N128 213 aaPredicted RBP3.42□□□□□ -1.86
SNORA40.19-201ENST00000390846 REXO1Q8N1G1 1221 aaKnown RBP3.42□□□□□ -1.86
SNORA40.19-201ENST00000390846 MCMBPQ9BTE3 642 aa3.42□□□□□ -1.86
SNORA40.19-201ENST00000390846 LUC7LQ9NQ29 371 aaKnown RBP3.42□□□□□ -1.86
SNORA40.19-201ENST00000390846 CHST7Q9NS84 486 aa3.42□□□□□ -1.86
SNORA40.19-201ENST00000390846 AP5S1Q9NUS5 200 aa3.42□□□□□ -1.86
SNORA40.19-201ENST00000390846 GFOD1Q9NXC2 390 aa3.42□□□□□ -1.86
SNORA40.19-201ENST00000390846 DUSP10Q9Y6W6 482 aa3.42□□□□□ -1.86
SNORA40.19-201ENST00000390846 SORBS3O60504 671 aa3.41□□□□□ -1.86
SNORA40.19-201ENST00000390846 PRKCAP17252 672 aa3.41□□□□□ -1.86
SNORA40.19-201ENST00000390846 LMNB1P20700 586 aa3.41□□□□□ -1.86
SNORA40.19-201ENST00000390846 SLURP1P55000 103 aa3.41□□□□□ -1.86
SNORA40.19-201ENST00000390846 AUHQ13825 339 aaKnown RBP3.41□□□□□ -1.86
SNORA40.19-201ENST00000390846 ZYXQ15942 572 aaKnown RBP3.41□□□□□ -1.86
SNORA40.19-201ENST00000390846 SNAP47Q5SQN1 464 aa3.41□□□□□ -1.86
SNORA40.19-201ENST00000390846 TMEM132EQ6IEE7 984 aa3.41□□□□□ -1.86
SNORA40.19-201ENST00000390846 CNKSR3Q6P9H4 555 aa3.41□□□□□ -1.86
SNORA40.19-201ENST00000390846 RELL1Q8IUW5 271 aa3.41□□□□□ -1.86
SNORA40.19-201ENST00000390846 RBM15Q96T37 977 aaKnown RBP eCLIP3.41□□□□□ -1.86
SNORA40.19-201ENST00000390846 IMPACTQ9P2X3 320 aa3.41□□□□□ -1.86
SNORA40.19-201ENST00000390846 ZMYM5Q9UJ78 669 aa3.41□□□□□ -1.86
SNORA40.19-201ENST00000390846 A0A1W2PQ45 241 aaPredicted RBP3.4□□□□□ -1.87
SNORA40.19-201ENST00000390846 A0A1W2PQY0 241 aa3.4□□□□□ -1.87
SNORA40.19-201ENST00000390846 WTIPA6NIX2 430 aaPredicted RBP3.4□□□□□ -1.87
SNORA40.19-201ENST00000390846 RAG1P15918 1043 aa3.4□□□□□ -1.87
SNORA40.19-201ENST00000390846 CCNFP41002 786 aa3.4□□□□□ -1.87
SNORA40.19-201ENST00000390846 LIMS1P48059 325 aa3.4□□□□□ -1.87
SNORA40.19-201ENST00000390846 RNF4P78317 190 aa3.4□□□□□ -1.87
SNORA40.19-201ENST00000390846 RTP5Q14D33 572 aa3.4□□□□□ -1.87
SNORA40.19-201ENST00000390846 CLEC16AQ2KHT3 1053 aa3.4□□□□□ -1.87
SNORA40.19-201ENST00000390846 CCDC27Q2M243 656 aa3.4□□□□□ -1.87
SNORA40.19-201ENST00000390846 AXDND1Q5T1B0 1012 aaPredicted RBP3.4□□□□□ -1.87
SNORA40.19-201ENST00000390846 ZFYVE27Q5T4F4 411 aa3.4□□□□□ -1.87
SNORA40.19-201ENST00000390846 GALNT18Q6P9A2 607 aa3.4□□□□□ -1.87
SNORA40.19-201ENST00000390846 TMC6Q7Z403 805 aa3.4□□□□□ -1.87
SNORA40.19-201ENST00000390846 FRMD5Q7Z6J6 570 aa3.4□□□□□ -1.87
SNORA40.19-201ENST00000390846 TMEM151BQ8IW70 566 aa3.4□□□□□ -1.87
SNORA40.19-201ENST00000390846 ZNF513Q8N8E2 541 aaPredicted RBP3.4□□□□□ -1.87
SNORA40.19-201ENST00000390846 FNIP1Q8TF40 1166 aa3.4□□□□□ -1.87
SNORA40.19-201ENST00000390846 ZNF526Q8TF50 670 aaPredicted RBP3.4□□□□□ -1.87
SNORA40.19-201ENST00000390846 TEPSINQ96N21 525 aa3.4□□□□□ -1.87
SNORA40.19-201ENST00000390846 PWWP2AQ96N64 755 aa3.4□□□□□ -1.87
SNORA40.19-201ENST00000390846 SLC6A18Q96N87 628 aa3.4□□□□□ -1.87
SNORA40.19-201ENST00000390846 FCRL3Q96P31 734 aaPredicted RBP3.4□□□□□ -1.87
SNORA40.19-201ENST00000390846 SSBP3Q9BWW4 388 aaPredicted RBP3.4□□□□□ -1.87
SNORA40.19-201ENST00000390846 SIRT5Q9NXA8 310 aa3.4□□□□□ -1.87
SNORA40.19-201ENST00000390846 PRR13Q9NZ81 148 aa3.4□□□□□ -1.87
SNORA40.19-201ENST00000390846 H0Y8X5 98 aa3.39□□□□□ -1.87
SNORA40.19-201ENST00000390846 MEIS1O00470 390 aa3.39□□□□□ -1.87
SNORA40.19-201ENST00000390846 FGF10O15520 208 aaPredicted RBP3.39□□□□□ -1.87
SNORA40.19-201ENST00000390846 BUB1BO60566 1050 aaPredicted RBP3.39□□□□□ -1.87
SNORA40.19-201ENST00000390846 DBHP09172 617 aa3.39□□□□□ -1.87
SNORA40.19-201ENST00000390846 MAPKAPK2P49137 400 aa3.39□□□□□ -1.87
SNORA40.19-201ENST00000390846 ZNF445P59923 1031 aa3.39□□□□□ -1.87
SNORA40.19-201ENST00000390846 SEZ6Q53EL9 994 aa3.39□□□□□ -1.87
SNORA40.19-201ENST00000390846 ANKRD39Q53RE8 183 aa3.39□□□□□ -1.87
SNORA40.19-201ENST00000390846 INTS3Q68E01 1043 aaKnown RBP3.39□□□□□ -1.87
SNORA40.19-201ENST00000390846 PRRT2Q7Z6L0 340 aaPredicted RBP3.39□□□□□ -1.87
SNORA40.19-201ENST00000390846 SAPCD2Q86UD0 394 aa3.39□□□□□ -1.87
SNORA40.19-201ENST00000390846 NLGN2Q8NFZ4 835 aa3.39□□□□□ -1.87
SNORA40.19-201ENST00000390846 SYT3Q9BQG1 590 aa3.39□□□□□ -1.87
SNORA40.19-201ENST00000390846 NT5C1AQ9BXI3 368 aa3.39□□□□□ -1.87
SNORA40.19-201ENST00000390846 SPATA6Q9NWH7 488 aaPredicted RBP3.39□□□□□ -1.87
SNORA40.19-201ENST00000390846 SUCOQ9UBS9 1254 aaKnown RBP3.39□□□□□ -1.87
SNORA40.19-201ENST00000390846 SUPT16HQ9Y5B9 1047 aaKnown RBP3.39□□□□□ -1.87
SNORA40.19-201ENST00000390846 LTBP3Q9NS15 1303 aa3.39□□□□□ -1.87
SNORA40.19-201ENST00000390846 SH3D21A4FU49 640 aa3.38□□□□□ -1.87
SNORA40.19-201ENST00000390846 NUDT19A8MXV4 375 aa3.38□□□□□ -1.87
SNORA40.19-201ENST00000390846 RFXAPO00287 272 aa3.38□□□□□ -1.87
SNORA40.19-201ENST00000390846 SRGAP3O43295 1099 aa3.38□□□□□ -1.87
SNORA40.19-201ENST00000390846 CBFA2T2O43439 604 aa3.38□□□□□ -1.87
SNORA40.19-201ENST00000390846 NOBOXO60393 691 aa3.38□□□□□ -1.87
SNORA40.19-201ENST00000390846 EIF5BO60841 1220 aaKnown RBP3.38□□□□□ -1.87
SNORA40.19-201ENST00000390846 CLEC3AO75596 197 aa3.38□□□□□ -1.87
SNORA40.19-201ENST00000390846 HSP90B1P14625 803 aaKnown RBP3.38□□□□□ -1.87
SNORA40.19-201ENST00000390846 MC3RP41968 323 aa3.38□□□□□ -1.87
SNORA40.19-201ENST00000390846 ZNF200P98182 395 aaPredicted RBP3.38□□□□□ -1.87
SNORA40.19-201ENST00000390846 CYP4F8P98187 520 aa3.38□□□□□ -1.87
SNORA40.19-201ENST00000390846 CYP4F3Q08477 520 aa3.38□□□□□ -1.87
SNORA40.19-201ENST00000390846 LAPTM5Q13571 262 aa3.38□□□□□ -1.87
SNORA40.19-201ENST00000390846 PWP1Q13610 501 aa3.38□□□□□ -1.87
SNORA40.19-201ENST00000390846 SLC14A2Q15849 920 aa3.38□□□□□ -1.87
SNORA40.19-201ENST00000390846 CWF19L2Q2TBE0 894 aaKnown RBP3.38□□□□□ -1.87
SNORA40.19-201ENST00000390846 DCAF15Q66K64 600 aa3.38□□□□□ -1.87
SNORA40.19-201ENST00000390846 HHIPL2Q6UWX4 724 aa3.38□□□□□ -1.87
SNORA40.19-201ENST00000390846 LIPIQ6XZB0 460 aa3.38□□□□□ -1.87
SNORA40.19-201ENST00000390846 GK5Q6ZS86 529 aa3.38□□□□□ -1.87
SNORA40.19-201ENST00000390846 C7orf61Q8IZ16 206 aa3.38□□□□□ -1.87
SNORA40.19-201ENST00000390846 NOX5Q96PH1 765 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms