RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 ADAM10O14672 748 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 ZNF185O15231 689 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 CYP27B1O15528 508 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 PPFIA4O75335 1185 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 MICAL2O94851 1124 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 CBX7O95931 251 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 EOMESO95936 686 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 EFEMP2O95967 443 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 PLGP00747 810 aaPredicted RBP-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 CYP1A1P04798 512 aaPredicted RBP-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 NEFMP07197 916 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 ASGR2P07307 311 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 CTSBP07858 339 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 SLFN14P0C7P3 912 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 ESRRAP11474 423 aaPredicted RBP-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 COL6A1P12109 1028 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 CKBP12277 381 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 NCAM1P13591 858 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 BMP6P22004 513 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 CBLP22681 906 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 TPP2P29144 1249 aaPredicted RBP-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 GJA4P35212 333 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 THBS3P49746 956 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 COMPP49747 757 aaPredicted RBP-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 RGS3P49796 1198 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 HNRNPKP61978 463 aaKnown RBP eCLIP-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 TRA2BP62995 288 aaKnown RBP-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 TUBA4AP68366 448 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 HOXA4Q00056 320 aaPredicted RBP-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 RHDQ02161 417 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 TAP1Q03518 808 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 TNK2Q07912 1038 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 NR1H3Q13133 447 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 SMAD4Q13485 552 aaKnown RBP-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 TTLL12Q14166 644 aaPredicted RBP-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 SRSF7Q16629 238 aaKnown RBP eCLIP-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 KRTAP24-1Q3LI83 254 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 ZIK1Q3SY52 487 aaPredicted RBP-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 RTL5Q5HYW3 569 aaPredicted RBP-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 TBCELQ5QJ74 424 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 TTC39BQ5VTQ0 682 aaPredicted RBP-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 ZDHHC20Q5W0Z9 365 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 MCTP2Q6DN12 878 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 SMYD5Q6GMV2 418 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 C11orf87Q6NUJ2 197 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 GALNT18Q6P9A2 607 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 MAMDC4Q6UXC1 1216 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 CEP128Q6ZU80 1094 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 ARMCX6Q7L4S7 300 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 VN1R5Q7Z5H4 357 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 ZNF329Q86UD4 541 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 VRK3Q8IV63 474 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 ADHFE1Q8IWW8 467 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 KBTBD2Q8IY47 623 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 GSPT2Q8IYD1 628 aaKnown RBP-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 ALDH16A1Q8IZ83 802 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 RGL4Q8IZJ4 473 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 SPAG16Q8N0X2 631 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 CMTR1Q8N1G2 835 aaKnown RBP-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 STAG2Q8N3U4 1231 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 TTLL6Q8N841 843 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 LINC00482Q8N8I6 264 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 CEP120Q8N960 986 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 TMEM102Q8N9M5 508 aaPredicted RBP-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 FAM98AQ8NCA5 519 aaKnown RBP-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 SEMA6DQ8NFY4 1073 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 FBXO18Q8NFZ0 1043 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 SMARCC2Q8TAQ2 1214 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 LINC01599Q8WXQ3 324 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 DNASE2BQ8WZ79 361 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 HAS1Q92839 578 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 LENG9Q96B70 501 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 ZBTB8AQ96BR9 441 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 MBD6Q96DN6 1003 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 NGLY1Q96IV0 654 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 MAP6Q96JE9 813 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 LRRC37BQ96QE4 947 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 LMF1Q96S06 567 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 PTPN18Q99952 460 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 TRMOQ9BU70 441 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 BEGAINQ9BUH8 593 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 G6PC3Q9BUM1 346 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 NRDE2Q9H7Z3 1164 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 PCDH18Q9HCL0 1135 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 DISC1Q9NRI5 854 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 SLC7A10Q9NS82 523 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 TMEFF2Q9UIK5 374 aaPredicted RBP-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 ZNF777Q9ULD5 760 aaPredicted RBP-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 TPX2Q9ULW0 747 aaKnown RBP-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 PCDHA11Q9Y5I1 949 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 SLC30A1Q9Y6M5 507 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 ANKRD17O75179 2603 aaKnown RBP-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 ZNF804BA4D1E1 1349 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 MINK1Q8N4C8 1332 aaPredicted RBP-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 FAM90A10PA6NDY2 464 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 CGB1A6NKQ9 187 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 UBAP1LF5GYI3 381 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 H0Y858 1186 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 NFKBIEO00221 500 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 TRAF5O00463 557 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms