RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 GNA11P29992 359 aa15.78■□□□□ 0.12
RTF1-201ENST00000389629 EHHADHQ08426 723 aa15.78■□□□□ 0.12
RTF1-201ENST00000389629 TC2NQ8N9U0 490 aa15.78■□□□□ 0.12
RTF1-201ENST00000389629 GPKOWQ92917 476 aaPredicted RBP eCLIP15.78■□□□□ 0.12
RTF1-201ENST00000389629 DPH5Q9H2P9 285 aa15.78■□□□□ 0.12
RTF1-201ENST00000389629 TRIM68Q6AZZ1 485 aa15.78■□□□□ 0.12
RTF1-201ENST00000389629 UIMC1Q96RL1 719 aa15.78■□□□□ 0.12
RTF1-201ENST00000389629 RNF26Q9BY78 433 aaPredicted RBP15.78■□□□□ 0.12
RTF1-201ENST00000389629 MTRF1LQ9UGC7 380 aaKnown RBP15.78■□□□□ 0.12
RTF1-201ENST00000389629 H3BQF6 201 aa15.78■□□□□ 0.12
RTF1-201ENST00000389629 KLHL30Q0D2K2 578 aa15.78■□□□□ 0.12
RTF1-201ENST00000389629 ATG9AQ7Z3C6 839 aa15.78■□□□□ 0.12
RTF1-201ENST00000389629 RRP36Q96EU6 259 aaKnown RBP15.78■□□□□ 0.12
RTF1-201ENST00000389629 ATG3Q9NT62 314 aa15.78■□□□□ 0.12
RTF1-201ENST00000389629 MOCS3O95396 460 aa15.77■□□□□ 0.12
RTF1-201ENST00000389629 PPP1R2P41236 205 aa15.77■□□□□ 0.12
RTF1-201ENST00000389629 INF2Q27J81 1249 aa15.77■□□□□ 0.12
RTF1-201ENST00000389629 ACSBG1Q96GR2 724 aa15.77■□□□□ 0.12
RTF1-201ENST00000389629 IFT74Q96LB3 600 aa15.77■□□□□ 0.12
RTF1-201ENST00000389629 ABHD10Q9NUJ1 306 aa15.77■□□□□ 0.12
RTF1-201ENST00000389629 TBC1D7Q9P0N9 293 aa15.77■□□□□ 0.12
RTF1-201ENST00000389629 ARID4AP29374 1257 aaPredicted RBP15.77■□□□□ 0.12
RTF1-201ENST00000389629 SCG2P13521 617 aa15.77■□□□□ 0.11
RTF1-201ENST00000389629 CCDC84Q86UT8 332 aaPredicted RBP15.77■□□□□ 0.11
RTF1-201ENST00000389629 BLIDQ8IZY5 108 aa15.77■□□□□ 0.11
RTF1-201ENST00000389629 LCORLQ8N3X6 602 aa15.77■□□□□ 0.11
RTF1-201ENST00000389629 CTDP1Q9Y5B0 961 aaPredicted RBP15.77■□□□□ 0.11
RTF1-201ENST00000389629 ADGRL3Q9HAR2 1447 aa15.77■□□□□ 0.11
RTF1-201ENST00000389629 LDHCP07864 332 aa15.77■□□□□ 0.11
RTF1-201ENST00000389629 NR1D1P20393 614 aa15.77■□□□□ 0.11
RTF1-201ENST00000389629 ADAT2Q7Z6V5 191 aaKnown RBP15.77■□□□□ 0.11
RTF1-201ENST00000389629 RASGRP4Q8TDF6 673 aa15.77■□□□□ 0.11
RTF1-201ENST00000389629 GDAQ9Y2T3 454 aa15.77■□□□□ 0.11
RTF1-201ENST00000389629 SLC8A1P32418 973 aa15.76■□□□□ 0.11
RTF1-201ENST00000389629 RABL6Q3YEC7 729 aaPredicted RBP15.76■□□□□ 0.11
RTF1-201ENST00000389629 INTS8Q75QN2 995 aaKnown RBP15.76■□□□□ 0.11
RTF1-201ENST00000389629 SASH3O75995 380 aa15.76■□□□□ 0.11
RTF1-201ENST00000389629 SETDB1Q15047 1291 aa15.76■□□□□ 0.11
RTF1-201ENST00000389629 NOA1Q8NC60 698 aaKnown RBP15.76■□□□□ 0.11
RTF1-201ENST00000389629 IL17RAQ96F46 866 aa15.76■□□□□ 0.11
RTF1-201ENST00000389629 STRBPQ96SI9 672 aaKnown RBP15.76■□□□□ 0.11
RTF1-201ENST00000389629 RWDD2AQ9UIY3 292 aa15.76■□□□□ 0.11
RTF1-201ENST00000389629 SERPINA10Q9UK55 444 aa15.76■□□□□ 0.11
RTF1-201ENST00000389629 NFU1Q9UMS0 254 aa15.76■□□□□ 0.11
RTF1-201ENST00000389629 MROH1Q8NDA8 1641 aa15.76■□□□□ 0.11
RTF1-201ENST00000389629 PALLDQ8WX93 1383 aa15.76■□□□□ 0.11
RTF1-201ENST00000389629 GUCY1A2P33402 732 aa15.76■□□□□ 0.11
RTF1-201ENST00000389629 FOXO4P98177 505 aa15.76■□□□□ 0.11
RTF1-201ENST00000389629 TCP11X2Q5H9J9 407 aa15.76■□□□□ 0.11
RTF1-201ENST00000389629 KSR1Q8IVT5 923 aa15.76■□□□□ 0.11
RTF1-201ENST00000389629 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.76■□□□□ 0.11
RTF1-201ENST00000389629 FAM212AQ96EL1 285 aa15.76■□□□□ 0.11
RTF1-201ENST00000389629 ECM2O94769 699 aaPredicted RBP15.76■□□□□ 0.11
RTF1-201ENST00000389629 IFNAR2P48551 515 aa15.76■□□□□ 0.11
RTF1-201ENST00000389629 ZBTB16Q05516 673 aa15.76■□□□□ 0.11
RTF1-201ENST00000389629 ZNF658Q5TYW1 1059 aaPredicted RBP15.76■□□□□ 0.11
RTF1-201ENST00000389629 HIBCHQ6NVY1 386 aaPredicted RBP15.76■□□□□ 0.11
RTF1-201ENST00000389629 COG1Q8WTW3 980 aa15.76■□□□□ 0.11
RTF1-201ENST00000389629 CNOT6LQ96LI5 555 aaKnown RBP15.76■□□□□ 0.11
RTF1-201ENST00000389629 PNKPQ96T60 521 aa15.76■□□□□ 0.11
RTF1-201ENST00000389629 LY9Q9HBG7 655 aa15.76■□□□□ 0.11
RTF1-201ENST00000389629 TSKSQ9UJT2 592 aa15.76■□□□□ 0.11
RTF1-201ENST00000389629 ERVV-2B6SEH9 535 aa15.75■□□□□ 0.11
RTF1-201ENST00000389629 ASIC2Q16515 512 aa15.75■□□□□ 0.11
RTF1-201ENST00000389629 SFMBT2Q5VUG0 894 aa15.75■□□□□ 0.11
RTF1-201ENST00000389629 RAD9BQ6WBX8 426 aa15.75■□□□□ 0.11
RTF1-201ENST00000389629 NELFCDQ8IXH7 590 aa15.75■□□□□ 0.11
RTF1-201ENST00000389629 CXorf56Q9H5V9 222 aa15.75■□□□□ 0.11
RTF1-201ENST00000389629 SLC39A2Q9NP94 309 aa15.75■□□□□ 0.11
RTF1-201ENST00000389629 CEP83Q9Y592 693 aa15.75■□□□□ 0.11
RTF1-201ENST00000389629 ANTXR2P58335 489 aa15.75■□□□□ 0.11
RTF1-201ENST00000389629 PEX26Q7Z412 305 aa15.75■□□□□ 0.11
RTF1-201ENST00000389629 HOOK3Q86VS8 718 aa15.75■□□□□ 0.11
RTF1-201ENST00000389629 VSIG1Q86XK7 387 aa15.75■□□□□ 0.11
RTF1-201ENST00000389629 NHEJ1Q9H9Q4 299 aaPredicted RBP15.75■□□□□ 0.11
RTF1-201ENST00000389629 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.75■□□□□ 0.112e-6■■■□□ 17.5
RTF1-201ENST00000389629 DENND2AQ9ULE3 1009 aa15.75■□□□□ 0.11
RTF1-201ENST00000389629 CHUKO15111 745 aa15.75■□□□□ 0.11
RTF1-201ENST00000389629 GUCY2CP25092 1073 aa15.75■□□□□ 0.11
RTF1-201ENST00000389629 CETN2P41208 172 aa15.75■□□□□ 0.11
RTF1-201ENST00000389629 RBM5P52756 815 aaKnown RBP eCLIP15.75■□□□□ 0.11
RTF1-201ENST00000389629 USP14P54578 494 aa15.75■□□□□ 0.11
RTF1-201ENST00000389629 TFAP4Q01664 338 aa15.75■□□□□ 0.11
RTF1-201ENST00000389629 GYG1P46976 350 aa15.75■□□□□ 0.11
RTF1-201ENST00000389629 RFX5P48382 616 aaPredicted RBP15.75■□□□□ 0.11
RTF1-201ENST00000389629 CALCOCO2Q13137 446 aa15.75■□□□□ 0.11
RTF1-201ENST00000389629 CUL4BQ13620 913 aa15.75■□□□□ 0.11
RTF1-201ENST00000389629 TBC1D5Q92609 795 aa15.75■□□□□ 0.11
RTF1-201ENST00000389629 PSD3Q9NYI0 1048 aa15.75■□□□□ 0.11
RTF1-201ENST00000389629 SAP30BPQ9UHR5 308 aaKnown RBP15.75■□□□□ 0.11
RTF1-201ENST00000389629 ANKARQ7Z5J8 1434 aa15.75■□□□□ 0.11
RTF1-201ENST00000389629 NAA35Q5VZE5 725 aa15.74■□□□□ 0.11
RTF1-201ENST00000389629 USP49Q70CQ1 688 aa15.74■□□□□ 0.11
RTF1-201ENST00000389629 SYNE4Q8N205 404 aa15.74■□□□□ 0.11
RTF1-201ENST00000389629 ANKRD42Q8N9B4 389 aa15.74■□□□□ 0.11
RTF1-201ENST00000389629 CCDC63Q8NA47 563 aa15.74■□□□□ 0.11
RTF1-201ENST00000389629 NCAPD2Q15021 1401 aa15.74■□□□□ 0.11
RTF1-201ENST00000389629 ESYT3A0FGR9 886 aa15.74■□□□□ 0.11
RTF1-201ENST00000389629 SNAP23O00161 211 aa15.74■□□□□ 0.11
RTF1-201ENST00000389629 KRIT1O00522 736 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms