RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 F5H6K3 240 aa11.56□□□□□ -0.56
LTN1-203ENST00000389195 WNT10BO00744 389 aa11.56□□□□□ -0.56
LTN1-203ENST00000389195 TXKP42681 527 aa11.56□□□□□ -0.56
LTN1-203ENST00000389195 KLRC3Q07444 240 aa11.56□□□□□ -0.56
LTN1-203ENST00000389195 SLFN13Q68D06 897 aa11.56□□□□□ -0.56
LTN1-203ENST00000389195 CEP57L1Q8IYX8 460 aa11.56□□□□□ -0.56
LTN1-203ENST00000389195 P2RX7Q99572 595 aaKnown RBP11.56□□□□□ -0.56
LTN1-203ENST00000389195 HSD3B7Q9H2F3 369 aa11.56□□□□□ -0.56
LTN1-203ENST00000389195 FANCLQ9NW38 375 aa11.56□□□□□ -0.56
LTN1-203ENST00000389195 SLC37A4O43826 429 aa11.56□□□□□ -0.56
LTN1-203ENST00000389195 SMC2O95347 1197 aa11.56□□□□□ -0.56
LTN1-203ENST00000389195 CD44P16070 742 aaKnown RBP11.56□□□□□ -0.56
LTN1-203ENST00000389195 HOXA13P31271 388 aaPredicted RBP11.56□□□□□ -0.56
LTN1-203ENST00000389195 ATP2C1P98194 919 aaPredicted RBP11.56□□□□□ -0.56
LTN1-203ENST00000389195 CUL4BQ13620 913 aa11.56□□□□□ -0.56
LTN1-203ENST00000389195 NCAPHQ15003 741 aa11.56□□□□□ -0.56
LTN1-203ENST00000389195 DALRD3Q5D0E6 543 aaKnown RBP11.56□□□□□ -0.56
LTN1-203ENST00000389195 NIM1KQ8IY84 436 aa11.56□□□□□ -0.56
LTN1-203ENST00000389195 TBC1D5Q92609 795 aa11.56□□□□□ -0.56
LTN1-203ENST00000389195 HPS3Q969F9 1004 aa11.56□□□□□ -0.56
LTN1-203ENST00000389195 PAGE5Q96GU1 130 aa11.56□□□□□ -0.56
LTN1-203ENST00000389195 IFNKQ9P0W0 207 aa11.56□□□□□ -0.56
LTN1-203ENST00000389195 ZKSCAN5Q9Y2L8 839 aa11.56□□□□□ -0.56
LTN1-203ENST00000389195 MYH8P13535 1937 aa11.55□□□□□ -0.56
LTN1-203ENST00000389195 TMEM232C9JQI7 657 aa11.55□□□□□ -0.56
LTN1-203ENST00000389195 GNAQP50148 359 aa11.55□□□□□ -0.56
LTN1-203ENST00000389195 NLRP12P59046 1061 aa11.55□□□□□ -0.56
LTN1-203ENST00000389195 PRKG1Q13976 671 aa11.55□□□□□ -0.56
LTN1-203ENST00000389195 CC2D2BQ6DHV5 1058 aa11.55□□□□□ -0.56
LTN1-203ENST00000389195 RTKN2Q8IZC4 609 aa11.55□□□□□ -0.56
LTN1-203ENST00000389195 SPZ1Q9BXG8 430 aa11.55□□□□□ -0.56
LTN1-203ENST00000389195 IDI2Q9BXS1 227 aa11.55□□□□□ -0.56
LTN1-203ENST00000389195 RIOX1Q9H6W3 641 aa11.55□□□□□ -0.56
LTN1-203ENST00000389195 POLD4Q9HCU8 107 aa11.55□□□□□ -0.56
LTN1-203ENST00000389195 FBXO28Q9NVF7 368 aa11.55□□□□□ -0.56
LTN1-203ENST00000389195 C10orf71Q711Q0 1435 aa11.55□□□□□ -0.56
LTN1-203ENST00000389195 VIL1P09327 827 aaKnown RBP11.55□□□□□ -0.56
LTN1-203ENST00000389195 UBXN2AP68543 259 aa11.55□□□□□ -0.56
LTN1-203ENST00000389195 SOGA3Q5TF21 947 aa11.55□□□□□ -0.56
LTN1-203ENST00000389195 GMLQ99445 158 aa11.55□□□□□ -0.56
LTN1-203ENST00000389195 XPO4Q9C0E2 1151 aaKnown RBP11.55□□□□□ -0.56
LTN1-203ENST00000389195 ZMYND12Q9H0C1 365 aa11.55□□□□□ -0.56
LTN1-203ENST00000389195 CCDC39Q9UFE4 941 aa11.55□□□□□ -0.56
LTN1-203ENST00000389195 ZNRF3Q9ULT6 936 aa11.55□□□□□ -0.56
LTN1-203ENST00000389195 POTEMA6NI47 508 aa11.54□□□□□ -0.56
LTN1-203ENST00000389195 NDUFB10O96000 172 aa11.54□□□□□ -0.56
LTN1-203ENST00000389195 ERCC3P19447 782 aa11.54□□□□□ -0.56
LTN1-203ENST00000389195 DPYDQ12882 1025 aa11.54□□□□□ -0.56
LTN1-203ENST00000389195 QRICH1Q2TAL8 776 aa11.54□□□□□ -0.56
LTN1-203ENST00000389195 NUDT12Q9BQG2 462 aa11.54□□□□□ -0.56
LTN1-203ENST00000389195 SAMSN1Q9NSI8 373 aaKnown RBP11.54□□□□□ -0.56
LTN1-203ENST00000389195 CEP131Q9UPN4 1083 aa11.54□□□□□ -0.56
LTN1-203ENST00000389195 PLA2G4DQ86XP0 818 aa11.54□□□□□ -0.56
LTN1-203ENST00000389195 REXO1Q8N1G1 1221 aaKnown RBP11.54□□□□□ -0.56
LTN1-203ENST00000389195 CACTINQ8WUQ7 758 aaKnown RBP11.54□□□□□ -0.56
LTN1-203ENST00000389195 NAP1L5Q96NT1 182 aaPredicted RBP11.54□□□□□ -0.56
LTN1-203ENST00000389195 TAOK3Q9H2K8 898 aa11.54□□□□□ -0.56
LTN1-203ENST00000389195 PCDHA1Q9Y5I3 950 aa11.54□□□□□ -0.56
LTN1-203ENST00000389195 CNTNAP1P78357 1384 aa11.54□□□□□ -0.56
LTN1-203ENST00000389195 SIPA1L1O43166 1804 aa11.54□□□□□ -0.56
LTN1-203ENST00000389195 MYH4Q9Y623 1939 aa11.53□□□□□ -0.56
LTN1-203ENST00000389195 CALML3P27482 149 aa11.53□□□□□ -0.56
LTN1-203ENST00000389195 CCDC174Q6PII3 467 aa11.53□□□□□ -0.56
LTN1-203ENST00000389195 CERS3Q8IU89 383 aa11.53□□□□□ -0.56
LTN1-203ENST00000389195 SWAP70Q9UH65 585 aa11.53□□□□□ -0.56
LTN1-203ENST00000389195 TUBE1Q9UJT0 475 aa11.53□□□□□ -0.56
LTN1-203ENST00000389195 SNHG28P0DPA3 235 aa11.53□□□□□ -0.56
LTN1-203ENST00000389195 CLCN1P35523 988 aa11.53□□□□□ -0.56
LTN1-203ENST00000389195 NOVP48745 357 aa11.53□□□□□ -0.56
LTN1-203ENST00000389195 TATDN1Q6P1N9 297 aa11.53□□□□□ -0.56
LTN1-203ENST00000389195 TMED8Q6PL24 325 aaPredicted RBP11.53□□□□□ -0.56
LTN1-203ENST00000389195 CYP2W1Q8TAV3 490 aa11.53□□□□□ -0.56
LTN1-203ENST00000389195 JDP2Q8WYK2 163 aa11.53□□□□□ -0.56
LTN1-203ENST00000389195 SMARCE1Q969G3 411 aa11.53□□□□□ -0.56
LTN1-203ENST00000389195 FOCADQ5VW36 1801 aa11.53□□□□□ -0.56
LTN1-203ENST00000389195 ZBTB22O15209 634 aa11.52□□□□□ -0.56
LTN1-203ENST00000389195 CDC37Q16543 378 aaPredicted RBP11.52□□□□□ -0.56
LTN1-203ENST00000389195 FAM83BQ5T0W9 1011 aa11.52□□□□□ -0.56
LTN1-203ENST00000389195 DTHD1Q6ZMT9 781 aa11.52□□□□□ -0.56
LTN1-203ENST00000389195 SUPT20HQ8NEM7 779 aa11.52□□□□□ -0.56
LTN1-203ENST00000389195 KIFC2Q96AC6 838 aa11.52□□□□□ -0.56
LTN1-203ENST00000389195 DHX36Q9H2U1 1008 aaKnown RBP11.52□□□□□ -0.56
LTN1-203ENST00000389195 KANSL2Q9H9L4 492 aa11.52□□□□□ -0.56
LTN1-203ENST00000389195 C6orf50Q9HD87 102 aa11.52□□□□□ -0.56
LTN1-203ENST00000389195 GDAQ9Y2T3 454 aa11.52□□□□□ -0.56
LTN1-203ENST00000389195 POLD1P28340 1107 aa11.52□□□□□ -0.57
LTN1-203ENST00000389195 RAD51AP2Q09MP3 1159 aa11.52□□□□□ -0.57
LTN1-203ENST00000389195 RASA3Q14644 834 aa11.52□□□□□ -0.57
LTN1-203ENST00000389195 NONOQ15233 471 aaKnown RBP eCLIP11.52□□□□□ -0.57
LTN1-203ENST00000389195 NAALADL2Q58DX5 795 aa11.52□□□□□ -0.57
LTN1-203ENST00000389195 CCDC178Q5BJE1 867 aa11.52□□□□□ -0.57
LTN1-203ENST00000389195 FCHSD1Q86WN1 690 aa11.52□□□□□ -0.57
LTN1-203ENST00000389195 PSMD1Q99460 953 aa11.52□□□□□ -0.57
LTN1-203ENST00000389195 PSTPIP2Q9H939 334 aa11.52□□□□□ -0.57
LTN1-203ENST00000389195 MYOZ2Q9NPC6 264 aa11.52□□□□□ -0.57
LTN1-203ENST00000389195 FAM237AA0A1B0GTK4 181 aa11.51□□□□□ -0.57
LTN1-203ENST00000389195 HMGB2P26583 209 aaKnown RBP11.51□□□□□ -0.57
LTN1-203ENST00000389195 ADCY7P51828 1080 aa11.51□□□□□ -0.57
LTN1-203ENST00000389195 CCDC148Q8NFR7 591 aa11.51□□□□□ -0.57
LTN1-203ENST00000389195 PNMA6FA0A0J9YX94 578 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms