RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 IGFBP6P24592 240 aaPredicted RBP1.16□□□□□ -2.22
SNORD28-201ENST00000384706 TACR1P25103 407 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 GBP2P32456 591 aaPredicted RBP1.16□□□□□ -2.22
SNORD28-201ENST00000384706 MC3RP41968 323 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 GDF5P43026 501 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 MAPKAPK2P49137 400 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 GJA9P57773 515 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 RNF4P78317 190 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 ADAM17P78536 824 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 PRR5P85299 388 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 LMNB2Q03252 620 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 MVKQ03426 396 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 MLECQ14165 292 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 NR1I3Q14994 352 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 TAF1CQ15572 869 aaPredicted RBP1.16□□□□□ -2.22
SNORD28-201ENST00000384706 PLEKHN1Q494U1 663 aaPredicted RBP1.16□□□□□ -2.22
SNORD28-201ENST00000384706 VWA3BQ502W6 1294 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 NBPF12Q5TAG4 269 aaPredicted RBP1.16□□□□□ -2.22
SNORD28-201ENST00000384706 BICRALQ6AI39 1079 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 SPRED1Q7Z699 444 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 SAPCD2Q86UD0 394 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 CCDC84Q86UT8 332 aaPredicted RBP1.16□□□□□ -2.22
SNORD28-201ENST00000384706 RELL1Q8IUW5 271 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 NAT16Q8N8M0 369 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 GOLM1Q8NBJ4 401 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 PHC3Q8NDX5 983 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 TMEM52Q8NDY8 209 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 CHST13Q8NET6 341 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 FBXO27Q8NI29 283 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 SH3RF3Q8TEJ3 882 aaPredicted RBP1.16□□□□□ -2.22
SNORD28-201ENST00000384706 EAF1Q96JC9 268 aaPredicted RBP1.16□□□□□ -2.22
SNORD28-201ENST00000384706 C8orf49Q96NF6 230 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 JMJD8Q96S16 334 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 DUSP9Q99956 384 aaKnown RBP1.16□□□□□ -2.22
SNORD28-201ENST00000384706 MENTQ9BUN1 341 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 MRIQ9BWK5 157 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 PRDM14Q9GZV8 571 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 ANTXR1Q9H6X2 564 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 TNFRSF12AQ9NP84 129 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 CHST7Q9NS84 486 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 ERVK13-1Q9NX77 482 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 GFOD1Q9NXC2 390 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 ACSL6Q9UKU0 697 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 CNOT11Q9UKZ1 510 aaKnown RBP1.16□□□□□ -2.22
SNORD28-201ENST00000384706 PLA2G2DQ9UNK4 145 aa1.16□□□□□ -2.22
SNORD28-201ENST00000384706 GNEQ9Y223 722 aaKnown RBP1.16□□□□□ -2.22
SNORD28-201ENST00000384706 POLR3KQ9Y2Y1 108 aaPredicted RBP1.16□□□□□ -2.22
SNORD28-201ENST00000384706 ZNF536O15090 1300 aa1.15□□□□□ -2.22
SNORD28-201ENST00000384706 PRR36Q9H6K5 1346 aa1.15□□□□□ -2.22
SNORD28-201ENST00000384706 SIGLEC6O43699 453 aa1.15□□□□□ -2.23
SNORD28-201ENST00000384706 PRPF40AO75400 957 aaKnown RBP1.15□□□□□ -2.23
SNORD28-201ENST00000384706 CLEC3AO75596 197 aa1.15□□□□□ -2.23
SNORD28-201ENST00000384706 BRD1O95696 1058 aa1.15□□□□□ -2.23
SNORD28-201ENST00000384706 AMHP03971 560 aa1.15□□□□□ -2.23
SNORD28-201ENST00000384706 CYBBP04839 570 aa1.15□□□□□ -2.23
SNORD28-201ENST00000384706 ITGB3P05106 788 aa1.15□□□□□ -2.23
SNORD28-201ENST00000384706 DBHP09172 617 aa1.15□□□□□ -2.23
SNORD28-201ENST00000384706 GSTM1P09488 218 aa1.15□□□□□ -2.23
SNORD28-201ENST00000384706 NCAM1P13591 858 aa1.15□□□□□ -2.23
SNORD28-201ENST00000384706 C6P13671 934 aa1.15□□□□□ -2.23
SNORD28-201ENST00000384706 ENDOUP21128 410 aaKnown RBP1.15□□□□□ -2.23
SNORD28-201ENST00000384706 FBLN1P23142 703 aa1.15□□□□□ -2.23
SNORD28-201ENST00000384706 POLR2BP30876 1174 aaKnown RBP1.15□□□□□ -2.23
SNORD28-201ENST00000384706 CTSKP43235 329 aa1.15□□□□□ -2.23
SNORD28-201ENST00000384706 SARSP49591 514 aaKnown RBP1.15□□□□□ -2.23
SNORD28-201ENST00000384706 CAP1Q01518 475 aa1.15□□□□□ -2.23
SNORD28-201ENST00000384706 RAD51AP2Q09MP3 1159 aa1.15□□□□□ -2.23
SNORD28-201ENST00000384706 TBC1D10BQ4KMP7 808 aaPredicted RBP1.15□□□□□ -2.23
SNORD28-201ENST00000384706 SNAP47Q5SQN1 464 aa1.15□□□□□ -2.23
SNORD28-201ENST00000384706 HLA-DQA1Q5Y7H0 255 aa1.15□□□□□ -2.23
SNORD28-201ENST00000384706 PAQR3Q6TCH7 311 aa1.15□□□□□ -2.23
SNORD28-201ENST00000384706 CRTC3Q6UUV7 619 aa1.15□□□□□ -2.23
SNORD28-201ENST00000384706 TTLL7Q6ZT98 887 aa1.15□□□□□ -2.23
SNORD28-201ENST00000384706 REC114Q7Z4M0 266 aa1.15□□□□□ -2.23
SNORD28-201ENST00000384706 SLCO6A1Q86UG4 719 aa1.15□□□□□ -2.23
SNORD28-201ENST00000384706 CARFQ8N187 725 aa1.15□□□□□ -2.23
SNORD28-201ENST00000384706 ALG3Q92685 438 aa1.15□□□□□ -2.23
SNORD28-201ENST00000384706 ZBTB8AQ96BR9 441 aa1.15□□□□□ -2.23
SNORD28-201ENST00000384706 TMEM74Q96NL1 305 aa1.15□□□□□ -2.23
SNORD28-201ENST00000384706 NOX5Q96PH1 765 aa1.15□□□□□ -2.23
SNORD28-201ENST00000384706 RBM15Q96T37 977 aaKnown RBP eCLIP1.15□□□□□ -2.23
SNORD28-201ENST00000384706 DSCC1Q9BVC3 393 aa1.15□□□□□ -2.23
SNORD28-201ENST00000384706 NOC4LQ9BVI4 516 aaKnown RBP1.15□□□□□ -2.23
SNORD28-201ENST00000384706 LNPKQ9C0E8 428 aa1.15□□□□□ -2.23
SNORD28-201ENST00000384706 MKRN2Q9H000 416 aaKnown RBP1.15□□□□□ -2.23
SNORD28-201ENST00000384706 BCAS3Q9H6U6 928 aa1.15□□□□□ -2.23
SNORD28-201ENST00000384706 RXFP1Q9HBX9 757 aa1.15□□□□□ -2.23
SNORD28-201ENST00000384706 BRMS1Q9HCU9 246 aa1.15□□□□□ -2.23
SNORD28-201ENST00000384706 ST6GALNAC2Q9UJ37 374 aa1.15□□□□□ -2.23
SNORD28-201ENST00000384706 PCDHB12Q9Y5F1 795 aa1.15□□□□□ -2.23
SNORD28-201ENST00000384706 GTF3C3Q9Y5Q9 886 aa1.15□□□□□ -2.23
SNORD28-201ENST00000384706 USP31Q70CQ4 1352 aa1.14□□□□□ -2.23
SNORD28-201ENST00000384706 SH3D21A4FU49 640 aa1.14□□□□□ -2.23
SNORD28-201ENST00000384706 FAM86C2PA6NEL3 165 aa1.14□□□□□ -2.23
SNORD28-201ENST00000384706 C1QTNF3-AMACRE9PGA6 284 aa1.14□□□□□ -2.23
SNORD28-201ENST00000384706 CYR61O00622 381 aa1.14□□□□□ -2.23
SNORD28-201ENST00000384706 SMARCA5O60264 1052 aaPredicted RBP1.14□□□□□ -2.23
SNORD28-201ENST00000384706 FZD7O75084 574 aa1.14□□□□□ -2.23
SNORD28-201ENST00000384706 ZNF205O95201 554 aa1.14□□□□□ -2.23
SNORD28-201ENST00000384706 TBC1D8O95759 1140 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms