RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 CRTC3Q6UUV7 619 aa7.64□□□□□ -1.19
RNU6-40P-201ENST00000384254 DHX37Q8IY37 1157 aaKnown RBP7.64□□□□□ -1.19
RNU6-40P-201ENST00000384254 HDAC8Q9BY41 377 aa7.64□□□□□ -1.19
RNU6-40P-201ENST00000384254 NDOR1Q9UHB4 597 aa7.64□□□□□ -1.19
RNU6-40P-201ENST00000384254 SHISA3A0PJX4 238 aa7.63□□□□□ -1.19
RNU6-40P-201ENST00000384254 STXBP3O00186 592 aa7.63□□□□□ -1.19
RNU6-40P-201ENST00000384254 IRS4O14654 1257 aaPredicted RBP7.63□□□□□ -1.19
RNU6-40P-201ENST00000384254 EFCAB14O75071 495 aa7.63□□□□□ -1.19
RNU6-40P-201ENST00000384254 CEACAM5P06731 702 aa7.63□□□□□ -1.19
RNU6-40P-201ENST00000384254 FSTP19883 344 aa7.63□□□□□ -1.19
RNU6-40P-201ENST00000384254 CLCN7P51798 805 aa7.63□□□□□ -1.19
RNU6-40P-201ENST00000384254 PCBP3P57721 371 aaKnown RBP7.63□□□□□ -1.19
RNU6-40P-201ENST00000384254 KCNMA1Q12791 1236 aa7.63□□□□□ -1.19
RNU6-40P-201ENST00000384254 CBX2Q14781 532 aaPredicted RBP7.63□□□□□ -1.19
RNU6-40P-201ENST00000384254 CT47A1Q5JQC4 288 aaPredicted RBP7.63□□□□□ -1.19
RNU6-40P-201ENST00000384254 KSR1Q8IVT5 923 aa7.63□□□□□ -1.19
RNU6-40P-201ENST00000384254 FAM181AQ8N9Y4 354 aa7.63□□□□□ -1.19
RNU6-40P-201ENST00000384254 SHKBP1Q8TBC3 707 aa7.63□□□□□ -1.19
RNU6-40P-201ENST00000384254 MINPP1Q9UNW1 487 aa7.63□□□□□ -1.19
RNU6-40P-201ENST00000384254 BACE2Q9Y5Z0 518 aa7.63□□□□□ -1.19
RNU6-40P-201ENST00000384254 DLX3O60479 287 aa7.62□□□□□ -1.19
RNU6-40P-201ENST00000384254 SCG5P05408 212 aa7.62□□□□□ -1.19
RNU6-40P-201ENST00000384254 MYCLP1P12525 358 aaPredicted RBP7.62□□□□□ -1.19
RNU6-40P-201ENST00000384254 CDK11BP21127 795 aaKnown RBP7.62□□□□□ -1.19
RNU6-40P-201ENST00000384254 ENDOUP21128 410 aaKnown RBP7.62□□□□□ -1.19
RNU6-40P-201ENST00000384254 BMP8BP34820 402 aa7.62□□□□□ -1.19
RNU6-40P-201ENST00000384254 SEPHS1P49903 392 aa7.62□□□□□ -1.19
RNU6-40P-201ENST00000384254 OXCT1P55809 520 aa7.62□□□□□ -1.19
RNU6-40P-201ENST00000384254 SCRN1Q12765 414 aa7.62□□□□□ -1.19
RNU6-40P-201ENST00000384254 USP53Q70EK8 1073 aa7.62□□□□□ -1.19
RNU6-40P-201ENST00000384254 THAP5Q7Z6K1 395 aa7.62□□□□□ -1.19
RNU6-40P-201ENST00000384254 TMEM151AQ8N4L1 468 aa7.62□□□□□ -1.19
RNU6-40P-201ENST00000384254 TMEM145Q8NBT3 493 aa7.62□□□□□ -1.19
RNU6-40P-201ENST00000384254 TCTN2Q96GX1 697 aa7.62□□□□□ -1.19
RNU6-40P-201ENST00000384254 GPATCH3Q96I76 525 aa7.62□□□□□ -1.19
RNU6-40P-201ENST00000384254 PCDH12Q9NPG4 1184 aa7.62□□□□□ -1.19
RNU6-40P-201ENST00000384254 H3BS24 57 aa7.61□□□□□ -1.19
RNU6-40P-201ENST00000384254 CYP26A1O43174 497 aa7.61□□□□□ -1.19
RNU6-40P-201ENST00000384254 GDF11O95390 407 aa7.61□□□□□ -1.19
RNU6-40P-201ENST00000384254 H2AFB1P0C5Y9 115 aa7.61□□□□□ -1.19
RNU6-40P-201ENST00000384254 H2AFB2P0C5Z0 115 aa7.61□□□□□ -1.19
RNU6-40P-201ENST00000384254 TPP2P29144 1249 aaPredicted RBP7.61□□□□□ -1.19
RNU6-40P-201ENST00000384254 LTKP29376 864 aa7.61□□□□□ -1.19
RNU6-40P-201ENST00000384254 SF1Q15637 639 aaKnown RBP7.61□□□□□ -1.19
RNU6-40P-201ENST00000384254 IFI16Q16666 785 aaKnown RBP7.61□□□□□ -1.19
RNU6-40P-201ENST00000384254 PLA2G4EQ3MJ16 856 aa7.61□□□□□ -1.19
RNU6-40P-201ENST00000384254 TM4SF20Q53R12 229 aa7.61□□□□□ -1.19
RNU6-40P-201ENST00000384254 MAMDC2Q7Z304 686 aaPredicted RBP7.61□□□□□ -1.19
RNU6-40P-201ENST00000384254 TSPYL5Q86VY4 417 aaPredicted RBP7.61□□□□□ -1.19
RNU6-40P-201ENST00000384254 SHISA5Q8N114 240 aa7.61□□□□□ -1.19
RNU6-40P-201ENST00000384254 CHAC2Q8WUX2 184 aa7.61□□□□□ -1.19
RNU6-40P-201ENST00000384254 PTPRN2Q92932 1015 aa7.61□□□□□ -1.19
RNU6-40P-201ENST00000384254 INTS7Q9NVH2 962 aaKnown RBP7.61□□□□□ -1.19
RNU6-40P-201ENST00000384254 ZSWIM5Q9P217 1185 aa7.61□□□□□ -1.19
RNU6-40P-201ENST00000384254 MAGEC2Q9UBF1 373 aaPredicted RBP7.61□□□□□ -1.19
RNU6-40P-201ENST00000384254 TMEM265A0A087WTH1 108 aa7.6□□□□□ -1.19
RNU6-40P-201ENST00000384254 C2orf71A6NGG8 1288 aa7.6□□□□□ -1.19
RNU6-40P-201ENST00000384254 AURKAO14965 403 aa7.6□□□□□ -1.19
RNU6-40P-201ENST00000384254 CAPNS1P04632 268 aa7.6□□□□□ -1.19
RNU6-40P-201ENST00000384254 SYPP08247 313 aa7.6□□□□□ -1.19
RNU6-40P-201ENST00000384254 SRFP11831 508 aa7.6□□□□□ -1.19
RNU6-40P-201ENST00000384254 NAT1P18440 290 aa7.6□□□□□ -1.19
RNU6-40P-201ENST00000384254 SOX5P35711 763 aa7.6□□□□□ -1.19
RNU6-40P-201ENST00000384254 CTSKP43235 329 aa7.6□□□□□ -1.19
RNU6-40P-201ENST00000384254 DOC2BQ14184 412 aa7.6□□□□□ -1.19
RNU6-40P-201ENST00000384254 SLC51AQ86UW1 340 aa7.6□□□□□ -1.19
RNU6-40P-201ENST00000384254 PPIL6Q8IXY8 311 aa7.6□□□□□ -1.19
RNU6-40P-201ENST00000384254 NETO1Q8TDF5 533 aa7.6□□□□□ -1.19
RNU6-40P-201ENST00000384254 UBE2FQ969M7 185 aa7.6□□□□□ -1.19
RNU6-40P-201ENST00000384254 SYTL4Q96C24 671 aaPredicted RBP7.6□□□□□ -1.19
RNU6-40P-201ENST00000384254 HSPA12BQ96MM6 686 aa7.6□□□□□ -1.19
RNU6-40P-201ENST00000384254 DUSP15Q9H1R2 295 aaPredicted RBP7.6□□□□□ -1.19
RNU6-40P-201ENST00000384254 DUSP13Q9UII6 198 aa7.6□□□□□ -1.19
RNU6-40P-201ENST00000384254 ST14Q9Y5Y6 855 aa7.6□□□□□ -1.19
RNU6-40P-201ENST00000384254 BLACEA4D250 179 aa7.59□□□□□ -1.19
RNU6-40P-201ENST00000384254 AQP7O14520 342 aa7.59□□□□□ -1.19
RNU6-40P-201ENST00000384254 MEFVO15553 781 aaPredicted RBP7.59□□□□□ -1.19
RNU6-40P-201ENST00000384254 GSTM1P09488 218 aa7.59□□□□□ -1.19
RNU6-40P-201ENST00000384254 VAV1P15498 845 aa7.59□□□□□ -1.19
RNU6-40P-201ENST00000384254 FLT3P36888 993 aa7.59□□□□□ -1.19
RNU6-40P-201ENST00000384254 NKPD1Q17RQ9 610 aa7.59□□□□□ -1.19
RNU6-40P-201ENST00000384254 PRSS53Q2L4Q9 553 aa7.59□□□□□ -1.19
RNU6-40P-201ENST00000384254 TRIM61Q5EBN2 209 aa7.59□□□□□ -1.19
RNU6-40P-201ENST00000384254 EEF1DP3Q658K8 133 aa7.59□□□□□ -1.19
RNU6-40P-201ENST00000384254 RNF111Q6ZNA4 994 aa7.59□□□□□ -1.19
RNU6-40P-201ENST00000384254 TMPRSS7Q7RTY8 843 aa7.59□□□□□ -1.19
RNU6-40P-201ENST00000384254 KRT26Q7Z3Y9 468 aa7.59□□□□□ -1.19
RNU6-40P-201ENST00000384254 SPACA3Q8IXA5 215 aa7.59□□□□□ -1.19
RNU6-40P-201ENST00000384254 DCAF4Q8WV16 495 aa7.59□□□□□ -1.19
RNU6-40P-201ENST00000384254 PIM2Q9P1W9 311 aa7.59□□□□□ -1.19
RNU6-40P-201ENST00000384254 TCFL5Q9UL49 500 aa7.59□□□□□ -1.19
RNU6-40P-201ENST00000384254 TRBV23OR9-2A0A075B6M9 112 aa7.58□□□□□ -1.2
RNU6-40P-201ENST00000384254 PDE8AO60658 829 aa7.58□□□□□ -1.2
RNU6-40P-201ENST00000384254 THBDP07204 575 aa7.58□□□□□ -1.2
RNU6-40P-201ENST00000384254 IFNGR1P15260 489 aa7.58□□□□□ -1.2
RNU6-40P-201ENST00000384254 SLC35F1Q5T1Q4 408 aa7.58□□□□□ -1.2
RNU6-40P-201ENST00000384254 RCSD1Q6JBY9 416 aa7.58□□□□□ -1.2
RNU6-40P-201ENST00000384254 CNNM4Q6P4Q7 775 aa7.58□□□□□ -1.2
RNU6-40P-201ENST00000384254 BRAPQ7Z569 592 aa7.58□□□□□ -1.2
RNU6-40P-201ENST00000384254 NAT16Q8N8M0 369 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms