RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 CCDC121Q6ZUS5 278 aa16.69■□□□□ 0.26
CTNS-202ENST00000381870 CYFIP2Q96F07 1278 aa16.69■□□□□ 0.26
CTNS-202ENST00000381870 ZKSCAN3Q9BRR0 538 aa16.69■□□□□ 0.26
CTNS-202ENST00000381870 OSBPL7Q9BZF2 842 aa16.69■□□□□ 0.26
CTNS-202ENST00000381870 RBM12Q9NTZ6 932 aaKnown RBP16.69■□□□□ 0.26
CTNS-202ENST00000381870 TACC3Q9Y6A5 838 aa16.69■□□□□ 0.26
CTNS-202ENST00000381870 RASSF10A6NK89 507 aa16.69■□□□□ 0.26
CTNS-202ENST00000381870 NCK2O43639 380 aa16.69■□□□□ 0.26
CTNS-202ENST00000381870 GUCY2FP51841 1108 aa16.69■□□□□ 0.26
CTNS-202ENST00000381870 PMS1P54277 932 aaKnown RBP16.69■□□□□ 0.26
CTNS-202ENST00000381870 ITIH3Q06033 890 aa16.69■□□□□ 0.26
CTNS-202ENST00000381870 C8orf74Q6P047 294 aa16.69■□□□□ 0.26
CTNS-202ENST00000381870 EGFL6Q8IUX8 553 aa16.69■□□□□ 0.26
CTNS-202ENST00000381870 A0A1W2PQC6 194 aa16.68■□□□□ 0.26
CTNS-202ENST00000381870 OPLAHO14841 1288 aa16.68■□□□□ 0.26
CTNS-202ENST00000381870 RTN2O75298 545 aa16.68■□□□□ 0.26
CTNS-202ENST00000381870 GLI1P08151 1106 aa16.68■□□□□ 0.26
CTNS-202ENST00000381870 RPSAP08865 295 aaKnown RBP16.68■□□□□ 0.26
CTNS-202ENST00000381870 LIFRP42702 1097 aa16.68■□□□□ 0.26
CTNS-202ENST00000381870 VAV2P52735 878 aa16.68■□□□□ 0.26
CTNS-202ENST00000381870 CTDSPL2Q05D32 466 aa16.68■□□□□ 0.26
CTNS-202ENST00000381870 ZNF174Q15697 407 aa16.68■□□□□ 0.26
CTNS-202ENST00000381870 RTN1Q16799 776 aa16.68■□□□□ 0.26
CTNS-202ENST00000381870 CCDC181Q5TID7 509 aa16.68■□□□□ 0.26
CTNS-202ENST00000381870 EMC10Q5UCC4 262 aa16.68■□□□□ 0.26
CTNS-202ENST00000381870 TLDC1Q6P9B6 456 aa16.68■□□□□ 0.26
CTNS-202ENST00000381870 CRACR2BQ8N4Y2 399 aaPredicted RBP16.68■□□□□ 0.26
CTNS-202ENST00000381870 IFT81Q8WYA0 676 aa16.68■□□□□ 0.26
CTNS-202ENST00000381870 NFAT5O94916 1531 aa16.68■□□□□ 0.26
CTNS-202ENST00000381870 B4DLN1 442 aa16.68■□□□□ 0.26
CTNS-202ENST00000381870 PPP1R12BO60237 982 aaPredicted RBP16.68■□□□□ 0.26
CTNS-202ENST00000381870 DEXIO95424 95 aa16.68■□□□□ 0.26
CTNS-202ENST00000381870 PLEKP08567 350 aaPredicted RBP16.68■□□□□ 0.26
CTNS-202ENST00000381870 HPDP32754 393 aaPredicted RBP16.68■□□□□ 0.26
CTNS-202ENST00000381870 ZNF658Q5TYW1 1059 aaPredicted RBP16.68■□□□□ 0.26
CTNS-202ENST00000381870 SGSM3Q96HU1 749 aa16.68■□□□□ 0.26
CTNS-202ENST00000381870 TRIM6Q9C030 488 aaPredicted RBP16.68■□□□□ 0.26
CTNS-202ENST00000381870 GGA2Q9UJY4 613 aa16.68■□□□□ 0.26
CTNS-202ENST00000381870 USP54Q70EL1 1684 aa16.67■□□□□ 0.26
CTNS-202ENST00000381870 SKAP2O75563 359 aaPredicted RBP16.67■□□□□ 0.26
CTNS-202ENST00000381870 EZRP15311 586 aaKnown RBP16.67■□□□□ 0.26
CTNS-202ENST00000381870 TRIM21P19474 475 aaKnown RBP16.67■□□□□ 0.26
CTNS-202ENST00000381870 TNFRSF8P28908 595 aa16.67■□□□□ 0.26
CTNS-202ENST00000381870 ITGB3BPQ13352 177 aaPredicted RBP16.67■□□□□ 0.26
CTNS-202ENST00000381870 DRP2Q13474 957 aa16.67■□□□□ 0.26
CTNS-202ENST00000381870 TRIM58Q8NG06 486 aa16.67■□□□□ 0.26
CTNS-202ENST00000381870 EEF2KMTQ96G04 330 aa16.67■□□□□ 0.26
CTNS-202ENST00000381870 ATP6V1G3Q96LB4 118 aa16.67■□□□□ 0.26
CTNS-202ENST00000381870 TTYH3Q9C0H2 523 aa16.67■□□□□ 0.26
CTNS-202ENST00000381870 SLC52A2Q9HAB3 445 aa16.67■□□□□ 0.26
CTNS-202ENST00000381870 ZNHIT6Q9NWK9 470 aaKnown RBP16.67■□□□□ 0.26
CTNS-202ENST00000381870 GOLGA6L7A0A1B0GV03 622 aa16.67■□□□□ 0.26
CTNS-202ENST00000381870 H7C1D1 291 aa16.67■□□□□ 0.26
CTNS-202ENST00000381870 TACC1O75410 805 aa16.67■□□□□ 0.26
CTNS-202ENST00000381870 ADD2P35612 726 aa16.67■□□□□ 0.26
CTNS-202ENST00000381870 PDXDC2PQ6P474 469 aa16.67■□□□□ 0.26
CTNS-202ENST00000381870 CCDC170Q8IYT3 715 aa16.67■□□□□ 0.26
CTNS-202ENST00000381870 PLBD2Q8NHP8 589 aa16.67■□□□□ 0.26
CTNS-202ENST00000381870 MS4A14Q96JA4 679 aa16.67■□□□□ 0.26
CTNS-202ENST00000381870 ACTR5Q9H9F9 607 aaPredicted RBP16.67■□□□□ 0.26
CTNS-202ENST00000381870 ARFGEF2Q9Y6D5 1785 aa16.66■□□□□ 0.26
CTNS-202ENST00000381870 PDS5AQ29RF7 1337 aaKnown RBP16.66■□□□□ 0.26
CTNS-202ENST00000381870 ATP2C2O75185 946 aa16.66■□□□□ 0.26
CTNS-202ENST00000381870 CIAO1O76071 339 aa16.66■□□□□ 0.26
CTNS-202ENST00000381870 QPCTQ16769 361 aa16.66■□□□□ 0.26
CTNS-202ENST00000381870 ANKRD20A8PQ5CZ79 823 aa16.66■□□□□ 0.26
CTNS-202ENST00000381870 FMNL3Q8IVF7 1028 aa16.66■□□□□ 0.26
CTNS-202ENST00000381870 TMEM94Q12767 1356 aa16.66■□□□□ 0.26
CTNS-202ENST00000381870 RPN1P04843 607 aaKnown RBP16.65■□□□□ 0.26
CTNS-202ENST00000381870 ERCC3P19447 782 aa16.65■□□□□ 0.26
CTNS-202ENST00000381870 NAA25Q14CX7 972 aa16.65■□□□□ 0.26
CTNS-202ENST00000381870 PROSER2Q86WR7 435 aaPredicted RBP16.65■□□□□ 0.26
CTNS-202ENST00000381870 GPIHBP1Q8IV16 184 aa16.65■□□□□ 0.26
CTNS-202ENST00000381870 FERMT2Q96AC1 680 aa16.65■□□□□ 0.26
CTNS-202ENST00000381870 SH2D4AQ9H788 454 aa16.65■□□□□ 0.26
CTNS-202ENST00000381870 EPB41L5Q9HCM4 733 aa16.65■□□□□ 0.26
CTNS-202ENST00000381870 HYOU1Q9Y4L1 999 aa16.65■□□□□ 0.26
CTNS-202ENST00000381870 A0A1B0GUA9 196 aa16.65■□□□□ 0.26
CTNS-202ENST00000381870 hCG_1642624A0A1W2PR95 340 aa16.65■□□□□ 0.26
CTNS-202ENST00000381870 NUTM2BA6NNL0 878 aaPredicted RBP16.65■□□□□ 0.26
CTNS-202ENST00000381870 NUTM2EB1AL46 878 aaPredicted RBP16.65■□□□□ 0.26
CTNS-202ENST00000381870 BACH1O14867 736 aa16.65■□□□□ 0.26
CTNS-202ENST00000381870 GTPBP6O43824 516 aaPredicted RBP16.65■□□□□ 0.26
CTNS-202ENST00000381870 SNRPA1P09661 255 aaKnown RBP16.65■□□□□ 0.26
CTNS-202ENST00000381870 MCAMP43121 646 aa16.65■□□□□ 0.26
CTNS-202ENST00000381870 CCNHP51946 323 aaPredicted RBP16.65■□□□□ 0.26
CTNS-202ENST00000381870 GUCY2DQ02846 1103 aa16.65■□□□□ 0.26
CTNS-202ENST00000381870 TCIRG1Q13488 830 aa16.65■□□□□ 0.26
CTNS-202ENST00000381870 TRADDQ15628 312 aa16.65■□□□□ 0.26
CTNS-202ENST00000381870 NUP133Q8WUM0 1156 aa16.65■□□□□ 0.26
CTNS-202ENST00000381870 CCDC85AQ96PX6 553 aaPredicted RBP16.65■□□□□ 0.26
CTNS-202ENST00000381870 ZNF335Q9H4Z2 1342 aaPredicted RBP16.65■□□□□ 0.26
CTNS-202ENST00000381870 PRLRP16471 622 aa16.64■□□□□ 0.26
CTNS-202ENST00000381870 RRP12Q5JTH9 1297 aaKnown RBP16.64■□□□□ 0.26
CTNS-202ENST00000381870 CD302Q8IX05 232 aa16.64■□□□□ 0.26
CTNS-202ENST00000381870 IFT20Q8IY31 132 aa16.64■□□□□ 0.26
CTNS-202ENST00000381870 CEP120Q8N960 986 aa16.64■□□□□ 0.26
CTNS-202ENST00000381870 TSGA10Q9BZW7 698 aa16.64■□□□□ 0.26
CTNS-202ENST00000381870 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.64■□□□□ 0.26
CTNS-202ENST00000381870 ATP6V0A4Q9HBG4 840 aa16.64■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms