RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 ITSN1Q15811 1721 aa21.07■□□□□ 0.96
SMARCD1-201ENST00000381513 RAPGEF3O95398 923 aa21.07■□□□□ 0.96
SMARCD1-201ENST00000381513 IGKV5-2P06315 115 aa21.07■□□□□ 0.96
SMARCD1-201ENST00000381513 RILPL1Q5EBL4 403 aa21.07■□□□□ 0.96
SMARCD1-201ENST00000381513 SPATA20Q8TB22 786 aa21.07■□□□□ 0.96
SMARCD1-201ENST00000381513 GSDMAQ96QA5 445 aa21.07■□□□□ 0.96
SMARCD1-201ENST00000381513 UBAC1Q9BSL1 405 aa21.07■□□□□ 0.96
SMARCD1-201ENST00000381513 CABP5Q9NP86 173 aa21.07■□□□□ 0.96
SMARCD1-201ENST00000381513 NOP53Q9NZM5 478 aaKnown RBP21.07■□□□□ 0.96
SMARCD1-201ENST00000381513 BSDC1Q9NW68 430 aaPredicted RBP21.06■□□□□ 0.96
SMARCD1-201ENST00000381513 CACNA1FO60840 1977 aa21.06■□□□□ 0.96
SMARCD1-201ENST00000381513 PALLDQ8WX93 1383 aa21.06■□□□□ 0.96
SMARCD1-201ENST00000381513 A0A087X0B3 334 aa21.06■□□□□ 0.96
SMARCD1-201ENST00000381513 TCP1P17987 556 aaKnown RBP21.06■□□□□ 0.96
SMARCD1-201ENST00000381513 SLC30A9Q6PML9 568 aa21.06■□□□□ 0.96
SMARCD1-201ENST00000381513 SENP2Q9HC62 589 aa21.06■□□□□ 0.96
SMARCD1-201ENST00000381513 HOMER3Q9NSC5 361 aa21.06■□□□□ 0.96
SMARCD1-201ENST00000381513 SRPRBQ9Y5M8 271 aaKnown RBP21.06■□□□□ 0.96
SMARCD1-201ENST00000381513 EID1Q9Y6B2 187 aa21.06■□□□□ 0.96
SMARCD1-201ENST00000381513 ALS2CR12Q96Q35 445 aa21.06■□□□□ 0.96
SMARCD1-201ENST00000381513 TRAPPC3O43617 180 aa21.05■□□□□ 0.96
SMARCD1-201ENST00000381513 NEFHP12036 1026 aa21.05■□□□□ 0.96
SMARCD1-201ENST00000381513 NLRP6P59044 892 aa21.05■□□□□ 0.96
SMARCD1-201ENST00000381513 FAM133BQ5BKY9 247 aaKnown RBP21.05■□□□□ 0.96
SMARCD1-201ENST00000381513 APOA5Q6Q788 366 aa21.05■□□□□ 0.96
SMARCD1-201ENST00000381513 MB21D1Q8N884 522 aa21.05■□□□□ 0.96
SMARCD1-201ENST00000381513 CEP131Q9UPN4 1083 aa21.05■□□□□ 0.96
SMARCD1-201ENST00000381513 IFIH1Q9BYX4 1025 aaKnown RBP21.05■□□□□ 0.96
SMARCD1-201ENST00000381513 EBF2Q9HAK2 575 aa21.05■□□□□ 0.96
SMARCD1-201ENST00000381513 SETD1BQ9UPS6 1966 aaKnown RBP21.05■□□□□ 0.96
SMARCD1-201ENST00000381513 UBN2Q6ZU65 1347 aa21.05■□□□□ 0.96
SMARCD1-201ENST00000381513 PARP1P09874 1014 aaKnown RBP21.04■□□□□ 0.96
SMARCD1-201ENST00000381513 RAB27AP51159 221 aa21.04■□□□□ 0.96
SMARCD1-201ENST00000381513 RPUSD2Q8IZ73 545 aaKnown RBP21.04■□□□□ 0.96
SMARCD1-201ENST00000381513 FBXL16Q8N461 479 aa21.04■□□□□ 0.96
SMARCD1-201ENST00000381513 NGDNQ8NEJ9 315 aaKnown RBP21.04■□□□□ 0.96
SMARCD1-201ENST00000381513 AGAP11Q8TF27 550 aa21.04■□□□□ 0.96
SMARCD1-201ENST00000381513 CNKSR2Q8WXI2 1034 aa21.04■□□□□ 0.96
SMARCD1-201ENST00000381513 RUBCNQ92622 972 aa21.04■□□□□ 0.96
SMARCD1-201ENST00000381513 NUTM2BA6NNL0 878 aaPredicted RBP21.04■□□□□ 0.96
SMARCD1-201ENST00000381513 NUTM2EB1AL46 878 aaPredicted RBP21.04■□□□□ 0.96
SMARCD1-201ENST00000381513 SMNDC1O75940 238 aaKnown RBP eCLIP21.04■□□□□ 0.96
SMARCD1-201ENST00000381513 SYMPKQ92797 1274 aaKnown RBP21.04■□□□□ 0.96
SMARCD1-201ENST00000381513 DNAJC7Q99615 494 aa21.04■□□□□ 0.96
SMARCD1-201ENST00000381513 OVOS2A0A0J9YW53 1432 aa21.04■□□□□ 0.96
SMARCD1-201ENST00000381513 OVOS2Q6IE36 1432 aa21.04■□□□□ 0.96
SMARCD1-201ENST00000381513 LRRC10BA6NIK2 292 aa21.04■□□□□ 0.96
SMARCD1-201ENST00000381513 RANBP6O60518 1105 aaKnown RBP21.04■□□□□ 0.96
SMARCD1-201ENST00000381513 SMIM24O75264 130 aa21.04■□□□□ 0.96
SMARCD1-201ENST00000381513 DNAJC8O75937 253 aaPredicted RBP21.04■□□□□ 0.96
SMARCD1-201ENST00000381513 TRADDQ15628 312 aa21.04■□□□□ 0.96
SMARCD1-201ENST00000381513 C14orf37Q86TY3 774 aa21.04■□□□□ 0.96
SMARCD1-201ENST00000381513 RAPGEF5Q92565 580 aa21.04■□□□□ 0.96
SMARCD1-201ENST00000381513 SIGLEC1Q9BZZ2 1709 aa21.04■□□□□ 0.96
SMARCD1-201ENST00000381513 GCKRQ14397 625 aa21.03■□□□□ 0.96
SMARCD1-201ENST00000381513 TRIM68Q6AZZ1 485 aa21.03■□□□□ 0.96
SMARCD1-201ENST00000381513 PIK3R5Q8WYR1 880 aa21.03■□□□□ 0.96
SMARCD1-201ENST00000381513 ZNF570Q96NI8 536 aa21.03■□□□□ 0.96
SMARCD1-201ENST00000381513 KRT12Q99456 494 aa21.03■□□□□ 0.96
SMARCD1-201ENST00000381513 MAGEC2Q9UBF1 373 aaPredicted RBP21.03■□□□□ 0.96
SMARCD1-201ENST00000381513 NOVA2Q9UNW9 492 aaKnown RBP21.03■□□□□ 0.96
SMARCD1-201ENST00000381513 TRIM49BA6NDI0 452 aa21.03■□□□□ 0.96
SMARCD1-201ENST00000381513 TRIM37O94972 964 aa21.03■□□□□ 0.96
SMARCD1-201ENST00000381513 GUCY1A2P33402 732 aa21.03■□□□□ 0.96
SMARCD1-201ENST00000381513 CCT6BQ92526 530 aa21.03■□□□□ 0.96
SMARCD1-201ENST00000381513 TSGA10Q9BZW7 698 aa21.03■□□□□ 0.96
SMARCD1-201ENST00000381513 CAPN11Q9UMQ6 739 aa21.03■□□□□ 0.96
SMARCD1-201ENST00000381513 CTNNA1P35221 906 aaKnown RBP21.02■□□□□ 0.96
SMARCD1-201ENST00000381513 ZC3H12AQ5D1E8 599 aaKnown RBP21.02■□□□□ 0.96
SMARCD1-201ENST00000381513 MAEAQ7L5Y9 396 aa21.02■□□□□ 0.96
SMARCD1-201ENST00000381513 CMTR1Q8N1G2 835 aaKnown RBP21.02■□□□□ 0.96
SMARCD1-201ENST00000381513 ANKS4BQ8N8V4 417 aa21.02■□□□□ 0.96
SMARCD1-201ENST00000381513 TSC22D3Q99576 134 aa21.02■□□□□ 0.96
SMARCD1-201ENST00000381513 PANK4Q9NVE7 773 aa21.02■□□□□ 0.96
SMARCD1-201ENST00000381513 NEURL1BA8MQ27 555 aa21.02■□□□□ 0.96
SMARCD1-201ENST00000381513 G3BP2Q9UN86 482 aaKnown RBP21.02■□□□□ 0.96
SMARCD1-201ENST00000381513 B4E1Z4 1266 aa21.02■□□□□ 0.95
SMARCD1-201ENST00000381513 ARID4AP29374 1257 aaPredicted RBP21.02■□□□□ 0.95
SMARCD1-201ENST00000381513 PRPHP41219 470 aa21.02■□□□□ 0.95
SMARCD1-201ENST00000381513 CDC37Q16543 378 aaPredicted RBP21.02■□□□□ 0.95
SMARCD1-201ENST00000381513 CFAP221Q4G0U5 840 aa21.02■□□□□ 0.95
SMARCD1-201ENST00000381513 TYW1BQ6NUM6 668 aa21.02■□□□□ 0.95
SMARCD1-201ENST00000381513 CCDC197Q8NCU1 140 aa21.02■□□□□ 0.95
SMARCD1-201ENST00000381513 TMBIM4Q9HC24 238 aa21.02■□□□□ 0.95
SMARCD1-201ENST00000381513 RWDD2AQ9UIY3 292 aa21.02■□□□□ 0.95
SMARCD1-201ENST00000381513 B4DLN1 442 aa21.01■□□□□ 0.95
SMARCD1-201ENST00000381513 LACTB2Q53H82 288 aaPredicted RBP21.01■□□□□ 0.95
SMARCD1-201ENST00000381513 ZNF579Q8NAF0 562 aaKnown RBP21.01■□□□□ 0.95
SMARCD1-201ENST00000381513 GDAQ9Y2T3 454 aa21.01■□□□□ 0.95
SMARCD1-201ENST00000381513 BUB1O43683 1085 aa21.01■□□□□ 0.95
SMARCD1-201ENST00000381513 AKR1B10O60218 316 aa21.01■□□□□ 0.95
SMARCD1-201ENST00000381513 KLK7P49862 253 aa21.01■□□□□ 0.95
SMARCD1-201ENST00000381513 ZNF530Q6P9A1 599 aaPredicted RBP21.01■□□□□ 0.95
SMARCD1-201ENST00000381513 KLHL7Q8IXQ5 586 aa21.01■□□□□ 0.95
SMARCD1-201ENST00000381513 TRIM22Q8IYM9 498 aa21.01■□□□□ 0.95
SMARCD1-201ENST00000381513 UBLCP1Q8WVY7 318 aaPredicted RBP21.01■□□□□ 0.95
SMARCD1-201ENST00000381513 ERICH2A1L162 156 aa21■□□□□ 0.95
SMARCD1-201ENST00000381513 CCT8L1PA6NM43 557 aa21■□□□□ 0.95
SMARCD1-201ENST00000381513 MMP1P03956 469 aa21■□□□□ 0.95
SMARCD1-201ENST00000381513 PLEKP08567 350 aaPredicted RBP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms