RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 MYO10Q9HD67 2058 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 SYNRGQ9UMZ2 1314 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 O00370 1275 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 CAMK4Q16566 473 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 CNNM4Q6P4Q7 775 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 NEK10Q6ZWH5 1172 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 CCDC42Q96M95 316 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 SLAIN2Q9P270 581 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 GOLGA8AA7E2F4 631 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 GOLGA8BA8MQT2 603 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 ATP5J2-PTCD1G3V325 749 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 I3L4J1 428 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 TBCAO75347 108 aaKnown RBP5.36□□□□□ -1.55
PTPRD-203ENST00000381196 PDE6CP51160 858 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 CEBPZQ03701 1054 aaKnown RBP5.36□□□□□ -1.55
PTPRD-203ENST00000381196 TRPC4APQ8TEL6 797 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 UIMC1Q96RL1 719 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 HAUS2Q9NVX0 235 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 CCDC162PA2VCL2 907 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 ACADSP16219 412 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 TNFRSF8P28908 595 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 HEATR3Q7Z4Q2 680 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 PRPF31Q8WWY3 499 aaKnown RBP5.36□□□□□ -1.55
PTPRD-203ENST00000381196 IFT81Q8WYA0 676 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 SPDL1Q96EA4 605 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 TSC22D3Q99576 134 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 QTRT2Q9H974 415 aaKnown RBP5.36□□□□□ -1.55
PTPRD-203ENST00000381196 MYH7P12883 1935 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 MAST3O60307 1309 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 ATP8B3O60423 1300 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 BIRC5O15392 142 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 GGPS1O95749 300 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 CPA3P15088 417 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 RPL13P26373 211 aaKnown RBP5.36□□□□□ -1.55
PTPRD-203ENST00000381196 PDE1AP54750 535 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 USH1GQ495M9 461 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 NCAPH2Q6IBW4 605 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 CAPRIN2Q6IMN6 1127 aaKnown RBP5.36□□□□□ -1.55
PTPRD-203ENST00000381196 TRMT1LQ7Z2T5 733 aaKnown RBP5.36□□□□□ -1.55
PTPRD-203ENST00000381196 SMCR8Q8TEV9 937 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-203ENST00000381196 IL1RAPL2Q9NP60 686 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 JADE2Q9NQC1 790 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 SEPT3Q9UH03 358 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 WDR17Q8IZU2 1322 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 TSPY3P0CV98 308 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 TSPY8P0CW00 308 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 PHBP35232 272 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 TSPY1Q01534 308 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 ADCY2Q08462 1091 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 TCP11L1Q9NUJ3 509 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 TPCN1Q9ULQ1 816 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 KDRP35968 1356 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 ERBB4Q15303 1308 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 H7C1D1 291 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 MIER3Q7Z3K6 550 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 CROCCP3Q8IVE0 287 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 PBKQ96KB5 322 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 GOLGA8TH3BQL2 631 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 GOLGA8HP0CJ92 632 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 ADKP55263 362 aaKnown RBP5.36□□□□□ -1.55
PTPRD-203ENST00000381196 NOP14P78316 857 aaKnown RBP5.36□□□□□ -1.55
PTPRD-203ENST00000381196 RAD51AP2Q09MP3 1159 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 INAQ16352 499 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 ZNF449Q6P9G9 518 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 NCOA7Q8NI08 942 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 ALKQ9UM73 1620 aa5.36□□□□□ -1.55
PTPRD-203ENST00000381196 ANKRD20A4Q4UJ75 823 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 ANKRD20A8PQ5CZ79 823 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 ANKRD20A2Q5SQ80 823 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 ANKRD20A1Q5TYW2 823 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 DENND2CQ68D51 928 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 CALML4Q96GE6 196 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 TMEM87BQ96K49 555 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 KDM6AO15550 1401 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-203ENST00000381196 PPIP5K2O43314 1243 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 MXRA7P84157 204 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 SLC30A9Q6PML9 568 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 KRT27Q7Z3Y8 459 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 SECISBP2LQ93073 1101 aaKnown RBP5.35□□□□□ -1.55
PTPRD-203ENST00000381196 LRRIQ3A6PVS8 624 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-203ENST00000381196 STRNO43815 780 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 CLTAP09496 248 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 CUL3Q13618 768 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 ELF2Q15723 593 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.35□□□□□ -1.55
PTPRD-203ENST00000381196 SPAG5Q96R06 1193 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 ITIH6Q6UXX5 1313 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 FLT4P35916 1363 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 ZSCAN20P17040 1043 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-203ENST00000381196 SERPINB10P48595 397 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 ESRRGP62508 458 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 PFDN4Q9NQP4 134 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 AFDNP55196 1824 aaKnown RBP5.35□□□□□ -1.55
PTPRD-203ENST00000381196 TNFAIP1Q13829 316 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 ANKRD13DQ6ZTN6 518 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 MCUR1Q96AQ8 359 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 IQCA1LA6NCM1 817 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 AHCYL1O43865 530 aa5.35□□□□□ -1.55
PTPRD-203ENST00000381196 SSRP1Q08945 709 aaKnown RBP5.35□□□□□ -1.55
PTPRD-203ENST00000381196 WDR93Q6P2C0 686 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms