RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 K7ELQ4 463 aaPredicted RBP21.79■■□□□ 1.08
SMN2-202ENST00000380742 MAP2K1Q02750 393 aaPredicted RBP21.79■■□□□ 1.08
SMN2-202ENST00000380742 QRICH1Q2TAL8 776 aa21.79■■□□□ 1.08
SMN2-202ENST00000380742 CCDC174Q6PII3 467 aa21.79■■□□□ 1.08
SMN2-202ENST00000380742 HOMER1Q86YM7 354 aa21.79■■□□□ 1.08
SMN2-202ENST00000380742 ANKRD13CQ8N6S4 541 aa21.79■■□□□ 1.08
SMN2-202ENST00000380742 MB21D1Q8N884 522 aa21.79■■□□□ 1.08
SMN2-202ENST00000380742 GTF3C2Q8WUA4 911 aaPredicted RBP21.79■■□□□ 1.08
SMN2-202ENST00000380742 CFHR5Q9BXR6 569 aa21.79■■□□□ 1.08
SMN2-202ENST00000380742 CPA4Q9UI42 421 aa21.79■■□□□ 1.08
SMN2-202ENST00000380742 ZNF214Q9UL59 606 aaPredicted RBP21.79■■□□□ 1.08
SMN2-202ENST00000380742 RABGAP1Q9Y3P9 1069 aa21.79■■□□□ 1.08
SMN2-202ENST00000380742 TBC1D8O95759 1140 aa21.78■■□□□ 1.08
SMN2-202ENST00000380742 BCRP11274 1271 aa21.78■■□□□ 1.08
SMN2-202ENST00000380742 Q3C1V9 767 aa21.78■■□□□ 1.08
SMN2-202ENST00000380742 C17orf99Q6UX52 265 aa21.78■■□□□ 1.08
SMN2-202ENST00000380742 HSCBQ8IWL3 235 aa21.78■■□□□ 1.08
SMN2-202ENST00000380742 CPXCR1Q8N123 301 aa21.78■■□□□ 1.08
SMN2-202ENST00000380742 RRP36Q96EU6 259 aaKnown RBP21.78■■□□□ 1.08
SMN2-202ENST00000380742 RAVER2Q9HCJ3 691 aaKnown RBP21.78■■□□□ 1.08
SMN2-202ENST00000380742 V9GY48 417 aaPredicted RBP21.78■■□□□ 1.08
SMN2-202ENST00000380742 MGAMO43451 1857 aa21.78■■□□□ 1.08
SMN2-202ENST00000380742 ZBTB5O15062 677 aa21.77■■□□□ 1.08
SMN2-202ENST00000380742 PRPF3O43395 683 aaKnown RBP21.77■■□□□ 1.08
SMN2-202ENST00000380742 PPP1R11O60927 126 aaPredicted RBP21.77■■□□□ 1.08
SMN2-202ENST00000380742 CPLX2Q6PUV4 134 aaKnown RBP21.77■■□□□ 1.08
SMN2-202ENST00000380742 NSUN7Q8NE18 718 aaKnown RBP21.77■■□□□ 1.08
SMN2-202ENST00000380742 AGBL1Q96MI9 1066 aa21.77■■□□□ 1.08
SMN2-202ENST00000380742 SLC26A6Q9BXS9 759 aa21.77■■□□□ 1.08
SMN2-202ENST00000380742 MORF4L1Q9UBU8 362 aa21.77■■□□□ 1.08
SMN2-202ENST00000380742 CTDP1Q9Y5B0 961 aaPredicted RBP21.77■■□□□ 1.08
SMN2-202ENST00000380742 PNMA6FA0A0J9YX94 578 aa21.76■■□□□ 1.07
SMN2-202ENST00000380742 JAK2O60674 1132 aa21.76■■□□□ 1.07
SMN2-202ENST00000380742 FMNL1O95466 1100 aaPredicted RBP21.76■■□□□ 1.07
SMN2-202ENST00000380742 TAL1P17542 331 aaPredicted RBP21.76■■□□□ 1.07
SMN2-202ENST00000380742 ERVK-9P63128 1117 aa21.76■■□□□ 1.07
SMN2-202ENST00000380742 ERVK-24P63145 666 aa21.76■■□□□ 1.07
SMN2-202ENST00000380742 CUL4AQ13619 759 aa21.76■■□□□ 1.07
SMN2-202ENST00000380742 JMYQ8N9B5 988 aa21.76■■□□□ 1.07
SMN2-202ENST00000380742 RNF26Q9BY78 433 aaPredicted RBP21.76■■□□□ 1.07
SMN2-202ENST00000380742 WBP1LQ9NX94 342 aa21.76■■□□□ 1.07
SMN2-202ENST00000380742 SAGE1Q9NXZ1 904 aa21.76■■□□□ 1.07
SMN2-202ENST00000380742 ZSWIM8A7E2V4 1837 aa21.75■■□□□ 1.07
SMN2-202ENST00000380742 ATP2A1O14983 1001 aa21.75■■□□□ 1.07
SMN2-202ENST00000380742 CDKL5O76039 1030 aa21.75■■□□□ 1.07
SMN2-202ENST00000380742 ICAM1P05362 532 aa21.75■■□□□ 1.07
SMN2-202ENST00000380742 OAZ1P54368 228 aa21.75■■□□□ 1.07
SMN2-202ENST00000380742 SSRP1Q08945 709 aaKnown RBP21.75■■□□□ 1.07
SMN2-202ENST00000380742 PLS1Q14651 629 aa21.75■■□□□ 1.07
SMN2-202ENST00000380742 FAM110CQ1W6H9 321 aa21.75■■□□□ 1.07
SMN2-202ENST00000380742 GPRC5AQ8NFJ5 357 aa21.75■■□□□ 1.07
SMN2-202ENST00000380742 SPATC1LQ9H0A9 340 aa21.75■■□□□ 1.07
SMN2-202ENST00000380742 RIPK3Q9Y572 518 aa21.75■■□□□ 1.07
SMN2-202ENST00000380742 ZNFX1Q9P2E3 1918 aaKnown RBP21.75■■□□□ 1.07
SMN2-202ENST00000380742 PTPDC1A2A3K4 754 aa21.74■■□□□ 1.07
SMN2-202ENST00000380742 FDPSP14324 419 aaKnown RBP21.74■■□□□ 1.07
SMN2-202ENST00000380742 STAT3P40763 770 aa21.74■■□□□ 1.07
SMN2-202ENST00000380742 PKN1Q16512 942 aa21.74■■□□□ 1.07
SMN2-202ENST00000380742 SNRNP48Q6IEG0 339 aaKnown RBP21.74■■□□□ 1.07
SMN2-202ENST00000380742 SMARCC2Q8TAQ2 1214 aa21.74■■□□□ 1.07
SMN2-202ENST00000380742 LLPHQ9BRT6 129 aaKnown RBP21.74■■□□□ 1.07
SMN2-202ENST00000380742 TEX13BQ9BXU2 312 aa21.74■■□□□ 1.07
SMN2-202ENST00000380742 SEC63Q9UGP8 760 aaKnown RBP21.74■■□□□ 1.07
SMN2-202ENST00000380742 RBBP6Q7Z6E9 1792 aaKnown RBP21.74■■□□□ 1.07
SMN2-202ENST00000380742 STK36Q9NRP7 1315 aa21.74■■□□□ 1.07
SMN2-202ENST00000380742 SLC4A3P48751 1232 aa21.74■■□□□ 1.07
SMN2-202ENST00000380742 FBXO11Q86XK2 927 aa21.74■■□□□ 1.07
SMN2-202ENST00000380742 TRIM22Q8IYM9 498 aa21.74■■□□□ 1.07
SMN2-202ENST00000380742 DDX11Q96FC9 970 aa21.74■■□□□ 1.07
SMN2-202ENST00000380742 BEGAINQ9BUH8 593 aa21.74■■□□□ 1.07
SMN2-202ENST00000380742 AMNQ9BXJ7 453 aa21.74■■□□□ 1.07
SMN2-202ENST00000380742 MOV10L1Q9BXT6 1211 aaKnown RBP21.74■■□□□ 1.07
SMN2-202ENST00000380742 CCPG1Q9ULG6 757 aa21.74■■□□□ 1.07
SMN2-202ENST00000380742 PLXNB2O15031 1838 aa21.73■■□□□ 1.07
SMN2-202ENST00000380742 AKAP17AQ02040 695 aaKnown RBP21.73■■□□□ 1.07
SMN2-202ENST00000380742 PFKFB3Q16875 520 aaPredicted RBP21.73■■□□□ 1.07
SMN2-202ENST00000380742 USH1GQ495M9 461 aa21.73■■□□□ 1.07
SMN2-202ENST00000380742 RIOX2Q8IUF8 465 aa21.73■■□□□ 1.07
SMN2-202ENST00000380742 COA7Q96BR5 231 aa21.73■■□□□ 1.07
SMN2-202ENST00000380742 RBM27Q9P2N5 1060 aaKnown RBP21.73■■□□□ 1.07
SMN2-202ENST00000380742 ORC3Q9UBD5 711 aaPredicted RBP21.73■■□□□ 1.07
SMN2-202ENST00000380742 DOCK3Q8IZD9 2030 aa21.72■■□□□ 1.07
SMN2-202ENST00000380742 DEXIO95424 95 aa21.72■■□□□ 1.07
SMN2-202ENST00000380742 ALAS1P13196 640 aa21.72■■□□□ 1.07
SMN2-202ENST00000380742 SCG2P13521 617 aa21.72■■□□□ 1.07
SMN2-202ENST00000380742 GPKOWQ92917 476 aaPredicted RBP eCLIP21.72■■□□□ 1.07
SMN2-202ENST00000380742 AIFM3Q96NN9 605 aa21.72■■□□□ 1.07
SMN2-202ENST00000380742 PORCNQ9H237 461 aa21.72■■□□□ 1.07
SMN2-202ENST00000380742 TSKSQ9UJT2 592 aa21.72■■□□□ 1.07
SMN2-202ENST00000380742 RBM19Q9Y4C8 960 aaKnown RBP21.72■■□□□ 1.07
SMN2-202ENST00000380742 PCDHA1Q9Y5I3 950 aa21.72■■□□□ 1.07
SMN2-202ENST00000380742 WWC2Q6AWC2 1192 aa21.71■■□□□ 1.07
SMN2-202ENST00000380742 ERCC3P19447 782 aa21.7■■□□□ 1.06
SMN2-202ENST00000380742 CCNA1P78396 465 aa21.7■■□□□ 1.06
SMN2-202ENST00000380742 MUM1L1Q5H9M0 696 aa21.7■■□□□ 1.06
SMN2-202ENST00000380742 TYW1BQ6NUM6 668 aa21.7■■□□□ 1.06
SMN2-202ENST00000380742 HEATR3Q7Z4Q2 680 aa21.7■■□□□ 1.06
SMN2-202ENST00000380742 NCAPG2Q86XI2 1143 aa21.7■■□□□ 1.06
SMN2-202ENST00000380742 SHCBP1Q8NEM2 672 aa21.7■■□□□ 1.06
SMN2-202ENST00000380742 SHISA4Q96DD7 197 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms