RNA–Protein interactions for RNA: ENST00000380692.6

MSL3-205, Transcript of MSL complex subunit 3, human

TSL 3

Gene MSL3, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSL3-205	ENST00000380692	WDR78	Q5VTH9	848 aa		10.64	□□□□□ -0.71
MSL3-205	ENST00000380692	CCDC174	Q6PII3	467 aa		10.64	□□□□□ -0.71
MSL3-205	ENST00000380692	MICU3	Q86XE3	530 aa		10.64	□□□□□ -0.71
MSL3-205	ENST00000380692	RAB11FIP4	Q86YS3	637 aa		10.64	□□□□□ -0.71
MSL3-205	ENST00000380692	ADGRF4	Q8IZF3	695 aa		10.64	□□□□□ -0.71
MSL3-205	ENST00000380692	LARP6	Q9BRS8	491 aa	Known RBP	10.64	□□□□□ -0.71
MSL3-205	ENST00000380692	MOV10L1	Q9BXT6	1211 aa	Known RBP	10.64	□□□□□ -0.71
MSL3-205	ENST00000380692	AGXT2	Q9BYV1	514 aa		10.64	□□□□□ -0.71
MSL3-205	ENST00000380692	ARHGAP39	Q9C0H5	1083 aa		10.64	□□□□□ -0.71
MSL3-205	ENST00000380692	CPVL	Q9H3G5	476 aa		10.64	□□□□□ -0.71
MSL3-205	ENST00000380692	EFCC1	Q9HA90	598 aa		10.64	□□□□□ -0.71
MSL3-205	ENST00000380692	LOC285556	D6RIA3	1793 aa		10.63	□□□□□ -0.71
MSL3-205	ENST00000380692	ATP2A1	O14983	1001 aa		10.63	□□□□□ -0.71
MSL3-205	ENST00000380692	SLC25A27	O95847	323 aa		10.63	□□□□□ -0.71
MSL3-205	ENST00000380692	GNRH1	P01148	92 aa		10.63	□□□□□ -0.71
MSL3-205	ENST00000380692	ERCC3	P19447	782 aa		10.63	□□□□□ -0.71
MSL3-205	ENST00000380692	CTGF	P29279	349 aa		10.63	□□□□□ -0.71
MSL3-205	ENST00000380692	OAZ1	P54368	228 aa		10.63	□□□□□ -0.71
MSL3-205	ENST00000380692	TOB2	Q14106	344 aa	Predicted RBP	10.63	□□□□□ -0.71
MSL3-205	ENST00000380692	PPP2R5B	Q15173	497 aa		10.63	□□□□□ -0.71
MSL3-205	ENST00000380692	ANKRD1	Q15327	319 aa		10.63	□□□□□ -0.71
MSL3-205	ENST00000380692	SNRNP48	Q6IEG0	339 aa	Known RBP	10.63	□□□□□ -0.71
MSL3-205	ENST00000380692	NCAPG2	Q86XI2	1143 aa		10.63	□□□□□ -0.71
MSL3-205	ENST00000380692	RIOX2	Q8IUF8	465 aa		10.63	□□□□□ -0.71
MSL3-205	ENST00000380692	REPS2	Q8NFH8	660 aa		10.63	□□□□□ -0.71
MSL3-205	ENST00000380692	COA7	Q96BR5	231 aa		10.63	□□□□□ -0.71
MSL3-205	ENST00000380692	TRIM47	Q96LD4	638 aa		10.63	□□□□□ -0.71
MSL3-205	ENST00000380692	LZTS2	Q9BRK4	669 aa		10.63	□□□□□ -0.71
MSL3-205	ENST00000380692	TEX13B	Q9BXU2	312 aa		10.63	□□□□□ -0.71
MSL3-205	ENST00000380692	PORCN	Q9H237	461 aa		10.63	□□□□□ -0.71
MSL3-205	ENST00000380692	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	10.63	□□□□□ -0.71
MSL3-205	ENST00000380692	MROH8	Q9H579	483 aa		10.63	□□□□□ -0.71
MSL3-205	ENST00000380692	ZNF214	Q9UL59	606 aa	Predicted RBP	10.63	□□□□□ -0.71
MSL3-205	ENST00000380692	TRIM17	Q9Y577	477 aa		10.63	□□□□□ -0.71
MSL3-205	ENST00000380692	PTPRF	P10586	1907 aa		10.62	□□□□□ -0.71
MSL3-205	ENST00000380692	CCDC196	A0A1B0GTZ2	297 aa		10.62	□□□□□ -0.71
MSL3-205	ENST00000380692	GOLGA8A	A7E2F4	631 aa		10.62	□□□□□ -0.71
MSL3-205	ENST00000380692	GOLGA8B	A8MQT2	603 aa		10.62	□□□□□ -0.71
MSL3-205	ENST00000380692	ICAM1	P05362	532 aa		10.62	□□□□□ -0.71
MSL3-205	ENST00000380692	SMARCA1	P28370	1054 aa		10.62	□□□□□ -0.71
MSL3-205	ENST00000380692	PDIA3	P30101	505 aa	Known RBP	10.62	□□□□□ -0.71
MSL3-205	ENST00000380692	COPB2	P35606	906 aa		10.62	□□□□□ -0.71
MSL3-205	ENST00000380692	METAP2	P50579	478 aa	Known RBP eCLIP	10.62	□□□□□ -0.71
MSL3-205	ENST00000380692	RCAN1	P53805	252 aa		10.62	□□□□□ -0.71
MSL3-205	ENST00000380692	AK2	P54819	239 aa		10.62	□□□□□ -0.71
MSL3-205	ENST00000380692	EVC	P57679	992 aa		10.62	□□□□□ -0.71
MSL3-205	ENST00000380692	RTN1	Q16799	776 aa		10.62	□□□□□ -0.71
MSL3-205	ENST00000380692	OTOP1	Q7RTM1	612 aa		10.62	□□□□□ -0.71
MSL3-205	ENST00000380692	PLEKHH3	Q7Z736	793 aa		10.62	□□□□□ -0.71
MSL3-205	ENST00000380692	CTU1	Q7Z7A3	348 aa	Known RBP	10.62	□□□□□ -0.71
MSL3-205	ENST00000380692	NBPF11	Q86T75	865 aa		10.62	□□□□□ -0.71
MSL3-205	ENST00000380692	CMTR1	Q8N1G2	835 aa	Known RBP	10.62	□□□□□ -0.71
MSL3-205	ENST00000380692	CCDC82	Q8N4S0	544 aa		10.62	□□□□□ -0.71
MSL3-205	ENST00000380692	SHCBP1	Q8NEM2	672 aa		10.62	□□□□□ -0.71
MSL3-205	ENST00000380692	AGBL1	Q96MI9	1066 aa		10.62	□□□□□ -0.71
MSL3-205	ENST00000380692	TBC1D32	Q96NH3	1257 aa		10.62	□□□□□ -0.71
MSL3-205	ENST00000380692	KIF2C	Q99661	725 aa		10.62	□□□□□ -0.71
MSL3-205	ENST00000380692	RANBP17	Q9H2T7	1088 aa	Known RBP	10.62	□□□□□ -0.71
MSL3-205	ENST00000380692	RIOX1	Q9H6W3	641 aa		10.62	□□□□□ -0.71
MSL3-205	ENST00000380692	JMJD4	Q9H9V9	463 aa		10.62	□□□□□ -0.71
MSL3-205	ENST00000380692	RBM28	Q9NW13	759 aa	Known RBP	10.62	□□□□□ -0.71
MSL3-205	ENST00000380692	PNMA2	Q9UL42	364 aa		10.62	□□□□□ -0.71
MSL3-205	ENST00000380692	RIPK3	Q9Y572	518 aa		10.62	□□□□□ -0.71
MSL3-205	ENST00000380692	IVNS1ABP	Q9Y6Y0	642 aa		10.62	□□□□□ -0.71
MSL3-205	ENST00000380692	ZNF536	O15090	1300 aa		10.61	□□□□□ -0.71
MSL3-205	ENST00000380692	CYTH3	O43739	400 aa		10.61	□□□□□ -0.71
MSL3-205	ENST00000380692	STRN	O43815	780 aa		10.61	□□□□□ -0.71
MSL3-205	ENST00000380692	FCER1A	P12319	257 aa		10.61	□□□□□ -0.71
MSL3-205	ENST00000380692	ALAS1	P13196	640 aa		10.61	□□□□□ -0.71
MSL3-205	ENST00000380692	ADD1	P35611	737 aa	Known RBP	10.61	□□□□□ -0.71
MSL3-205	ENST00000380692	CCT2	P78371	535 aa	Known RBP	10.61	□□□□□ -0.71
MSL3-205	ENST00000380692	CAP1	Q01518	475 aa		10.61	□□□□□ -0.71
MSL3-205	ENST00000380692	CDC37	Q16543	378 aa	Predicted RBP	10.61	□□□□□ -0.71
MSL3-205	ENST00000380692	GPR142	Q7Z601	462 aa		10.61	□□□□□ -0.71
MSL3-205	ENST00000380692	HOMER1	Q86YM7	354 aa		10.61	□□□□□ -0.71
MSL3-205	ENST00000380692	SRBD1	Q8N5C6	995 aa	Known RBP	10.61	□□□□□ -0.71
MSL3-205	ENST00000380692	PIBF1	Q8WXW3	757 aa		10.61	□□□□□ -0.71
MSL3-205	ENST00000380692	ZNF274	Q96GC6	653 aa	Predicted RBP	10.61	□□□□□ -0.71
MSL3-205	ENST00000380692	HOMER2	Q9NSB8	354 aa		10.61	□□□□□ -0.71
MSL3-205	ENST00000380692	SRRD	Q9UH36	339 aa		10.61	□□□□□ -0.71
MSL3-205	ENST00000380692	CCPG1	Q9ULG6	757 aa		10.61	□□□□□ -0.71
MSL3-205	ENST00000380692	HPS5	Q9UPZ3	1129 aa		10.61	□□□□□ -0.71
MSL3-205	ENST00000380692	MYH4	Q9Y623	1939 aa		10.6	□□□□□ -0.71
MSL3-205	ENST00000380692	PNMA6F	A0A0J9YX94	578 aa		10.6	□□□□□ -0.71
MSL3-205	ENST00000380692	ZBTB5	O15062	677 aa		10.6	□□□□□ -0.71
MSL3-205	ENST00000380692	PLEKHA8P1	O95397	391 aa		10.6	□□□□□ -0.71
MSL3-205	ENST00000380692	PTPRE	P23469	700 aa		10.6	□□□□□ -0.71
MSL3-205	ENST00000380692	CDC27	P30260	824 aa		10.6	□□□□□ -0.71
MSL3-205	ENST00000380692	FLT3LG	P49771	235 aa		10.6	□□□□□ -0.71
MSL3-205	ENST00000380692	PRMT2	P55345	433 aa		10.6	□□□□□ -0.71
MSL3-205	ENST00000380692	STK3	Q13188	491 aa		10.6	□□□□□ -0.71
MSL3-205	ENST00000380692	KCTD2	Q14681	263 aa		10.6	□□□□□ -0.71
MSL3-205	ENST00000380692	RABEP1	Q15276	862 aa		10.6	□□□□□ -0.71
MSL3-205	ENST00000380692	PKN2	Q16513	984 aa	Known RBP	10.6	□□□□□ -0.71
MSL3-205	ENST00000380692	QRICH1	Q2TAL8	776 aa		10.6	□□□□□ -0.71
MSL3-205	ENST00000380692	TKFC	Q3LXA3	575 aa		10.6	□□□□□ -0.71
MSL3-205	ENST00000380692	TMTC3	Q6ZXV5	915 aa		10.6	□□□□□ -0.71
MSL3-205	ENST00000380692	NOL8	Q76FK4	1167 aa	Known RBP	10.6	□□□□□ -0.71
MSL3-205	ENST00000380692	FBXO11	Q86XK2	927 aa		10.6	□□□□□ -0.71
MSL3-205	ENST00000380692	CHST13	Q8NET6	341 aa		10.6	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms