RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 TTF2Q9UNY4 1162 aaKnown RBP13.68□□□□□ -0.22
RFC3-201ENST00000380071 MAST2Q6P0Q8 1798 aa13.67□□□□□ -0.22
RFC3-201ENST00000380071 TTC26A0AVF1 554 aa13.67□□□□□ -0.22
RFC3-201ENST00000380071 KLRF2D3W0D1 207 aa13.67□□□□□ -0.22
RFC3-201ENST00000380071 PPP4CP60510 307 aa13.67□□□□□ -0.22
RFC3-201ENST00000380071 MB21D1Q8N884 522 aa13.67□□□□□ -0.22
RFC3-201ENST00000380071 DAGLBQ8NCG7 672 aa13.67□□□□□ -0.22
RFC3-201ENST00000380071 CCSER1Q9C0I3 900 aa13.67□□□□□ -0.22
RFC3-201ENST00000380071 ROBO3Q96MS0 1386 aa13.67□□□□□ -0.22
RFC3-201ENST00000380071 CTAGE9A4FU28 777 aa13.66□□□□□ -0.22
RFC3-201ENST00000380071 PES1O00541 588 aaKnown RBP13.66□□□□□ -0.22
RFC3-201ENST00000380071 POLR3GO15318 223 aaPredicted RBP13.66□□□□□ -0.22
RFC3-201ENST00000380071 GRAPQ13588 217 aa13.66□□□□□ -0.22
RFC3-201ENST00000380071 KCNB1Q14721 858 aa13.66□□□□□ -0.22
RFC3-201ENST00000380071 TMED8Q6PL24 325 aaPredicted RBP13.66□□□□□ -0.22
RFC3-201ENST00000380071 USP17L2Q6R6M4 530 aa13.66□□□□□ -0.22
RFC3-201ENST00000380071 CCDC148Q8NFR7 591 aa13.66□□□□□ -0.22
RFC3-201ENST00000380071 GRAPLQ8TC17 118 aaPredicted RBP13.66□□□□□ -0.22
RFC3-201ENST00000380071 RTFDC1Q9BY42 306 aaPredicted RBP13.66□□□□□ -0.22
RFC3-201ENST00000380071 ZCCHC17Q9NP64 241 aaKnown RBP13.66□□□□□ -0.22
RFC3-201ENST00000380071 TRIM10Q9UDY6 481 aa13.66□□□□□ -0.22
RFC3-201ENST00000380071 LEMD3Q9Y2U8 911 aa13.66□□□□□ -0.22
RFC3-201ENST00000380071 COL24A1Q17RW2 1714 aa13.66□□□□□ -0.22
RFC3-201ENST00000380071 RHOBTB3O94955 611 aa13.66□□□□□ -0.22
RFC3-201ENST00000380071 PIP4K2BP78356 416 aa13.66□□□□□ -0.22
RFC3-201ENST00000380071 TXNRD1Q16881 649 aa13.66□□□□□ -0.22
RFC3-201ENST00000380071 LETM2Q2VYF4 491 aa13.66□□□□□ -0.22
RFC3-201ENST00000380071 AMOTL1Q8IY63 956 aa13.66□□□□□ -0.22
RFC3-201ENST00000380071 ZNF507Q8TCN5 953 aa13.66□□□□□ -0.22
RFC3-201ENST00000380071 ANKZF1Q9H8Y5 726 aa13.66□□□□□ -0.22
RFC3-201ENST00000380071 VAT1LQ9HCJ6 419 aa13.66□□□□□ -0.22
RFC3-201ENST00000380071 ARFGAP3Q9NP61 516 aa13.66□□□□□ -0.22
RFC3-201ENST00000380071 TFR2Q9UP52 801 aa13.66□□□□□ -0.22
RFC3-201ENST00000380071 REXO2Q9Y3B8 237 aaKnown RBP13.66□□□□□ -0.22
RFC3-201ENST00000380071 TNRC6CQ9HCJ0 1690 aaKnown RBP13.66□□□□□ -0.22
RFC3-201ENST00000380071 ATP8B1O43520 1251 aa13.65□□□□□ -0.22
RFC3-201ENST00000380071 CCNT1O60563 726 aaKnown RBP13.65□□□□□ -0.22
RFC3-201ENST00000380071 CDK8P49336 464 aa13.65□□□□□ -0.22
RFC3-201ENST00000380071 GSTO1P78417 241 aa13.65□□□□□ -0.22
RFC3-201ENST00000380071 TRIM14Q14142 442 aa13.65□□□□□ -0.22
RFC3-201ENST00000380071 CCDC178Q5BJE1 867 aa13.65□□□□□ -0.22
RFC3-201ENST00000380071 GALNT17Q6IS24 598 aa13.65□□□□□ -0.22
RFC3-201ENST00000380071 GIMAP8Q8ND71 665 aaPredicted RBP13.65□□□□□ -0.22
RFC3-201ENST00000380071 TRIM47Q96LD4 638 aa13.65□□□□□ -0.22
RFC3-201ENST00000380071 C8orf37Q96NL8 207 aa13.65□□□□□ -0.22
RFC3-201ENST00000380071 EPN1Q9Y6I3 576 aaPredicted RBP13.65□□□□□ -0.22
RFC3-201ENST00000380071 FLT1P17948 1338 aa13.65□□□□□ -0.22
RFC3-201ENST00000380071 SBF2Q86WG5 1849 aa13.65□□□□□ -0.22
RFC3-201ENST00000380071 SMCO2A6NFE2 343 aa13.65□□□□□ -0.22
RFC3-201ENST00000380071 PLCG1P19174 1290 aa13.65□□□□□ -0.22
RFC3-201ENST00000380071 BTDP43251 543 aa13.65□□□□□ -0.22
RFC3-201ENST00000380071 NAPAP54920 295 aa13.65□□□□□ -0.22
RFC3-201ENST00000380071 TTI2Q6NXR4 508 aa13.65□□□□□ -0.22
RFC3-201ENST00000380071 CABP7Q86V35 215 aa13.65□□□□□ -0.22
RFC3-201ENST00000380071 EYA3Q99504 573 aa13.65□□□□□ -0.22
RFC3-201ENST00000380071 DUSP9Q99956 384 aaKnown RBP13.65□□□□□ -0.22
RFC3-201ENST00000380071 FUT8Q9BYC5 575 aa13.65□□□□□ -0.22
RFC3-201ENST00000380071 UBXN6Q9BZV1 441 aa13.65□□□□□ -0.22
RFC3-201ENST00000380071 ZMYND12Q9H0C1 365 aa13.65□□□□□ -0.22
RFC3-201ENST00000380071 LGALS16A8MUM7 142 aa13.64□□□□□ -0.23
RFC3-201ENST00000380071 RFC4P35249 363 aa13.64□□□□□ -0.23
RFC3-201ENST00000380071 TECP42680 631 aa13.64□□□□□ -0.23
RFC3-201ENST00000380071 GPSM2P81274 684 aa13.64□□□□□ -0.23
RFC3-201ENST00000380071 CEP112Q8N8E3 955 aa13.64□□□□□ -0.23
RFC3-201ENST00000380071 OR8K1Q8NGG5 319 aa13.64□□□□□ -0.23
RFC3-201ENST00000380071 THAP9Q9H5L6 903 aa13.64□□□□□ -0.23
RFC3-201ENST00000380071 ERICH4A6NGS2 130 aa13.64□□□□□ -0.23
RFC3-201ENST00000380071 B4DLN1 442 aa13.64□□□□□ -0.23
RFC3-201ENST00000380071 PSMA7O14818 248 aa13.64□□□□□ -0.23
RFC3-201ENST00000380071 ZBTB22O15209 634 aa13.64□□□□□ -0.23
RFC3-201ENST00000380071 NKRFO15226 690 aaKnown RBP eCLIP13.64□□□□□ -0.23
RFC3-201ENST00000380071 NDUFA10O95299 355 aa13.64□□□□□ -0.23
RFC3-201ENST00000380071 PRPHP41219 470 aa13.64□□□□□ -0.23
RFC3-201ENST00000380071 KLK7P49862 253 aa13.64□□□□□ -0.23
RFC3-201ENST00000380071 STK4Q13043 487 aa13.64□□□□□ -0.23
RFC3-201ENST00000380071 LONRF2Q1L5Z9 754 aa13.64□□□□□ -0.23
RFC3-201ENST00000380071 WDR59Q6PJI9 974 aa13.64□□□□□ -0.23
RFC3-201ENST00000380071 ZNF804AQ7Z570 1209 aa13.64□□□□□ -0.23
RFC3-201ENST00000380071 NGLY1Q96IV0 654 aa13.64□□□□□ -0.23
RFC3-201ENST00000380071 PNKPQ96T60 521 aa13.64□□□□□ -0.23
RFC3-201ENST00000380071 NAPGQ99747 312 aaPredicted RBP13.64□□□□□ -0.23
RFC3-201ENST00000380071 GUCA1BQ9UMX6 200 aa13.64□□□□□ -0.23
RFC3-201ENST00000380071 LUC7L2Q9Y383 392 aaKnown RBP13.64□□□□□ -0.23
RFC3-201ENST00000380071 RASSF10A6NK89 507 aa13.63□□□□□ -0.23
RFC3-201ENST00000380071 LAD1O00515 517 aa13.63□□□□□ -0.23
RFC3-201ENST00000380071 LDHCP07864 332 aa13.63□□□□□ -0.23
RFC3-201ENST00000380071 OR52Z1P0C646 297 aa13.63□□□□□ -0.23
RFC3-201ENST00000380071 FCER1AP12319 257 aa13.63□□□□□ -0.23
RFC3-201ENST00000380071 EEF1GP26641 437 aaKnown RBP13.63□□□□□ -0.23
RFC3-201ENST00000380071 STIM1Q13586 685 aa13.63□□□□□ -0.23
RFC3-201ENST00000380071 SMC1AQ14683 1233 aaKnown RBP13.63□□□□□ -0.23
RFC3-201ENST00000380071 ANKRD40Q6AI12 368 aa13.63□□□□□ -0.23
RFC3-201ENST00000380071 HPS3Q969F9 1004 aa13.63□□□□□ -0.23
RFC3-201ENST00000380071 ZBTB9Q96C00 473 aa13.63□□□□□ -0.23
RFC3-201ENST00000380071 SPZ1Q9BXG8 430 aa13.63□□□□□ -0.23
RFC3-201ENST00000380071 UBA5Q9GZZ9 404 aa13.63□□□□□ -0.23
RFC3-201ENST00000380071 CD209Q9NNX6 404 aa13.63□□□□□ -0.23
RFC3-201ENST00000380071 AGPAT5Q9NUQ2 364 aa13.63□□□□□ -0.23
RFC3-201ENST00000380071 A0A1W2PQC6 194 aa13.63□□□□□ -0.23
RFC3-201ENST00000380071 MYL1P05976 194 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms