RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 FERMT2Q96AC1 680 aa22.11■■□□□ 1.13
SSU72-204ENST00000378726 MYOZ2Q9NPC6 264 aa22.11■■□□□ 1.13
SSU72-204ENST00000378726 CNTNAP1P78357 1384 aa22.1■■□□□ 1.13
SSU72-204ENST00000378726 WNT10BO00744 389 aa22.1■■□□□ 1.13
SSU72-204ENST00000378726 CAVIN2O95810 425 aa22.1■■□□□ 1.13
SSU72-204ENST00000378726 SLC16A2P36021 539 aa22.1■■□□□ 1.13
SSU72-204ENST00000378726 SLFN13Q68D06 897 aa22.1■■□□□ 1.13
SSU72-204ENST00000378726 ZBED3Q96IU2 234 aaPredicted RBP22.1■■□□□ 1.13
SSU72-204ENST00000378726 ANO10Q9NW15 660 aa22.1■■□□□ 1.13
SSU72-204ENST00000378726 GREB1LQ9C091 1923 aaPredicted RBP22.1■■□□□ 1.13
SSU72-204ENST00000378726 SHTN1A0MZ66 631 aa22.1■■□□□ 1.13
SSU72-204ENST00000378726 ATP2C1P98194 919 aaPredicted RBP22.1■■□□□ 1.13
SSU72-204ENST00000378726 FER1L6Q2WGJ9 1857 aa22.09■■□□□ 1.13
SSU72-204ENST00000378726 A0A087WWV3 80 aa22.09■■□□□ 1.13
SSU72-204ENST00000378726 SLC1A4P43007 532 aa22.09■■□□□ 1.13
SSU72-204ENST00000378726 USP49Q70CQ1 688 aa22.09■■□□□ 1.13
SSU72-204ENST00000378726 CNNM3Q8NE01 707 aa22.09■■□□□ 1.13
SSU72-204ENST00000378726 COA7Q96BR5 231 aa22.09■■□□□ 1.13
SSU72-204ENST00000378726 TMEM39BQ9GZU3 492 aa22.09■■□□□ 1.13
SSU72-204ENST00000378726 PRDM10Q9NQV6 1147 aa22.09■■□□□ 1.13
SSU72-204ENST00000378726 PNMA6FA0A0J9YX94 578 aa22.08■■□□□ 1.13
SSU72-204ENST00000378726 hCG_1984214I3L0E3 225 aa22.08■■□□□ 1.13
SSU72-204ENST00000378726 POLR2DO15514 142 aaKnown RBP22.08■■□□□ 1.13
SSU72-204ENST00000378726 KRBA2Q6ZNG9 492 aa22.08■■□□□ 1.13
SSU72-204ENST00000378726 FAM83AQ86UY5 434 aa22.08■■□□□ 1.13
SSU72-204ENST00000378726 ZNF713Q8N859 430 aaPredicted RBP22.08■■□□□ 1.13
SSU72-204ENST00000378726 DCAF4Q8WV16 495 aa22.08■■□□□ 1.13
SSU72-204ENST00000378726 F5H6K3 240 aa22.08■■□□□ 1.13
SSU72-204ENST00000378726 RASSF7Q02833 373 aa22.08■■□□□ 1.13
SSU72-204ENST00000378726 KLRC3Q07444 240 aa22.08■■□□□ 1.13
SSU72-204ENST00000378726 ZRSR1Q15695 479 aaKnown RBP22.08■■□□□ 1.13
SSU72-204ENST00000378726 INF2Q27J81 1249 aa22.08■■□□□ 1.13
SSU72-204ENST00000378726 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.08■■□□□ 1.13
SSU72-204ENST00000378726 NLGN2Q8NFZ4 835 aa22.08■■□□□ 1.13
SSU72-204ENST00000378726 BRCA1P38398 1863 aaKnown RBP22.08■■□□□ 1.12
SSU72-204ENST00000378726 USP17L10C9JJH3 530 aa22.07■■□□□ 1.12
SSU72-204ENST00000378726 LTBP3Q9NS15 1303 aa22.07■■□□□ 1.12
SSU72-204ENST00000378726 VWA3AA6NCI4 1184 aa22.07■■□□□ 1.12
SSU72-204ENST00000378726 C11orf57Q6ZUT1 292 aaPredicted RBP22.07■■□□□ 1.12
SSU72-204ENST00000378726 MYH4Q9Y623 1939 aa22.06■■□□□ 1.12
SSU72-204ENST00000378726 ESYT2A0FGR8 921 aa22.06■■□□□ 1.12
SSU72-204ENST00000378726 CTIFO43310 598 aaKnown RBP22.06■■□□□ 1.12
SSU72-204ENST00000378726 CCDC144BQ3MJ40 725 aa22.06■■□□□ 1.12
SSU72-204ENST00000378726 KRT25Q7Z3Z0 450 aa22.06■■□□□ 1.12
SSU72-204ENST00000378726 CDAN1Q8IWY9 1227 aa22.06■■□□□ 1.12
SSU72-204ENST00000378726 PDILTQ8N807 584 aa22.06■■□□□ 1.12
SSU72-204ENST00000378726 C4orf32Q8N8J7 132 aa22.06■■□□□ 1.12
SSU72-204ENST00000378726 EPSTI1Q96J88 318 aa22.06■■□□□ 1.12
SSU72-204ENST00000378726 RPS12P25398 132 aaKnown RBP22.06■■□□□ 1.12
SSU72-204ENST00000378726 MMP14P50281 582 aa22.06■■□□□ 1.12
SSU72-204ENST00000378726 PRELPP51888 382 aa22.06■■□□□ 1.12
SSU72-204ENST00000378726 MIGA2Q7L4E1 593 aa22.06■■□□□ 1.12
SSU72-204ENST00000378726 MTMR8Q96EF0 704 aa22.06■■□□□ 1.12
SSU72-204ENST00000378726 BIN2Q9UBW5 565 aaPredicted RBP22.06■■□□□ 1.12
SSU72-204ENST00000378726 ZBTB5O15062 677 aa22.05■■□□□ 1.12
SSU72-204ENST00000378726 TBC1D12O60347 775 aa22.05■■□□□ 1.12
SSU72-204ENST00000378726 ZNF280AP59817 542 aaPredicted RBP22.05■■□□□ 1.12
SSU72-204ENST00000378726 ELOA2Q8IYF1 753 aaPredicted RBP22.05■■□□□ 1.12
SSU72-204ENST00000378726 GMCL1P1Q8NEA9 526 aa22.05■■□□□ 1.12
SSU72-204ENST00000378726 CACTINQ8WUQ7 758 aaKnown RBP22.05■■□□□ 1.12
SSU72-204ENST00000378726 ANKRD7Q92527 254 aa22.05■■□□□ 1.12
SSU72-204ENST00000378726 C16orf45Q96MC5 204 aaPredicted RBP22.05■■□□□ 1.12
SSU72-204ENST00000378726 PPP1R11O60927 126 aaPredicted RBP22.04■■□□□ 1.12
SSU72-204ENST00000378726 PNOCQ13519 176 aa22.04■■□□□ 1.12
SSU72-204ENST00000378726 IQCB1Q15051 598 aa22.04■■□□□ 1.12
SSU72-204ENST00000378726 REXO1Q8N1G1 1221 aaKnown RBP22.04■■□□□ 1.12
SSU72-204ENST00000378726 SYMPKQ92797 1274 aaKnown RBP22.04■■□□□ 1.12
SSU72-204ENST00000378726 SERTAD1Q9UHV2 236 aa22.04■■□□□ 1.12
SSU72-204ENST00000378726 GJA3Q9Y6H8 435 aa22.04■■□□□ 1.12
SSU72-204ENST00000378726 UTRNP46939 3433 aa22.04■■□□□ 1.12
SSU72-204ENST00000378726 A0A1W2PRG0 241 aa22.04■■□□□ 1.12
SSU72-204ENST00000378726 FZD9O00144 591 aa22.04■■□□□ 1.12
SSU72-204ENST00000378726 BIN1O00499 593 aa22.04■■□□□ 1.12
SSU72-204ENST00000378726 CBX1P83916 185 aa22.04■■□□□ 1.12
SSU72-204ENST00000378726 NONOQ15233 471 aaKnown RBP eCLIP22.04■■□□□ 1.12
SSU72-204ENST00000378726 IL17AQ16552 155 aa22.04■■□□□ 1.12
SSU72-204ENST00000378726 JAKMIP3Q5VZ66 844 aa22.04■■□□□ 1.12
SSU72-204ENST00000378726 ARL6IP4Q66PJ3 421 aaKnown RBP22.04■■□□□ 1.12
SSU72-204ENST00000378726 HOOK1Q9UJC3 728 aaKnown RBP22.04■■□□□ 1.12
SSU72-204ENST00000378726 TUBE1Q9UJT0 475 aa22.04■■□□□ 1.12
SSU72-204ENST00000378726 NDUFB10O96000 172 aa22.03■■□□□ 1.12
SSU72-204ENST00000378726 EGFRP00533 1210 aa22.03■■□□□ 1.12
SSU72-204ENST00000378726 ADCY7P51828 1080 aa22.03■■□□□ 1.12
SSU72-204ENST00000378726 PDCL2Q8N4E4 241 aa22.03■■□□□ 1.12
SSU72-204ENST00000378726 GMCL1Q96IK5 515 aa22.03■■□□□ 1.12
SSU72-204ENST00000378726 PGAP2Q9UHJ9 254 aa22.03■■□□□ 1.12
SSU72-204ENST00000378726 SCAF8Q9UPN6 1271 aaKnown RBP22.03■■□□□ 1.12
SSU72-204ENST00000378726 TNNI2P48788 182 aa22.03■■□□□ 1.12
SSU72-204ENST00000378726 GMPSP49915 693 aaPredicted RBP22.03■■□□□ 1.12
SSU72-204ENST00000378726 NLRP12P59046 1061 aa22.03■■□□□ 1.12
SSU72-204ENST00000378726 MDM2Q00987 491 aaPredicted RBP22.03■■□□□ 1.12
SSU72-204ENST00000378726 DPF2Q92785 391 aa22.03■■□□□ 1.12
SSU72-204ENST00000378726 NUP88Q99567 741 aaPredicted RBP22.03■■□□□ 1.12
SSU72-204ENST00000378726 NAT10Q9H0A0 1025 aaKnown RBP22.03■■□□□ 1.12
SSU72-204ENST00000378726 TMEM260Q9NX78 707 aa22.03■■□□□ 1.12
SSU72-204ENST00000378726 FOXN1O15353 648 aa22.02■■□□□ 1.12
SSU72-204ENST00000378726 RASA3Q14644 834 aa22.02■■□□□ 1.12
SSU72-204ENST00000378726 CEP57L1Q8IYX8 460 aa22.02■■□□□ 1.12
SSU72-204ENST00000378726 CNOT7Q9UIV1 285 aaKnown RBP22.02■■□□□ 1.12
SSU72-204ENST00000378726 CDC25BP30305 580 aa22.02■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 363.8 ms