RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 RNF187Q5TA31 235 aaPredicted RBP14.66□□□□□ -0.06
NPHP4-203ENST00000378169 UTP14CQ5TAP6 766 aaKnown RBP14.66□□□□□ -0.06
NPHP4-203ENST00000378169 TMTC3Q6ZXV5 915 aa14.66□□□□□ -0.06
NPHP4-203ENST00000378169 IFIH1Q9BYX4 1025 aaKnown RBP14.66□□□□□ -0.06
NPHP4-203ENST00000378169 PPLO60437 1756 aa14.66□□□□□ -0.06
NPHP4-203ENST00000378169 TESPA1A2RU30 521 aaPredicted RBP14.65□□□□□ -0.06
NPHP4-203ENST00000378169 SORBS3O60504 671 aa14.65□□□□□ -0.06
NPHP4-203ENST00000378169 NEBLO76041 1014 aa14.65□□□□□ -0.06
NPHP4-203ENST00000378169 BAG6P46379 1132 aa14.65□□□□□ -0.06
NPHP4-203ENST00000378169 PLCB3Q01970 1234 aa14.65□□□□□ -0.06
NPHP4-203ENST00000378169 PABPC4Q13310 644 aaKnown RBP eCLIP14.65□□□□□ -0.06
NPHP4-203ENST00000378169 GPATCH4Q5T3I0 446 aaKnown RBP14.65□□□□□ -0.06
NPHP4-203ENST00000378169 CCDC17Q96LX7 622 aa14.65□□□□□ -0.06
NPHP4-203ENST00000378169 FNBP1Q96RU3 617 aa14.65□□□□□ -0.06
NPHP4-203ENST00000378169 UBN2Q6ZU65 1347 aa14.65□□□□□ -0.06
NPHP4-203ENST00000378169 CSF1RP07333 972 aa14.65□□□□□ -0.06
NPHP4-203ENST00000378169 KRT5P13647 590 aa14.65□□□□□ -0.06
NPHP4-203ENST00000378169 CAPN2P17655 700 aa14.65□□□□□ -0.06
NPHP4-203ENST00000378169 GUCY1A2P33402 732 aa14.65□□□□□ -0.06
NPHP4-203ENST00000378169 SMTNP53814 917 aa14.65□□□□□ -0.06
NPHP4-203ENST00000378169 PPARDQ03181 441 aa14.65□□□□□ -0.06
NPHP4-203ENST00000378169 TLDC2A0PJX2 215 aa14.65□□□□□ -0.06
NPHP4-203ENST00000378169 KIF28PB7ZC32 967 aa14.65□□□□□ -0.06
NPHP4-203ENST00000378169 DNM2P50570 870 aa14.65□□□□□ -0.06
NPHP4-203ENST00000378169 CYP2J2P51589 502 aa14.65□□□□□ -0.06
NPHP4-203ENST00000378169 NFIXQ14938 502 aa14.65□□□□□ -0.06
NPHP4-203ENST00000378169 ASIC2Q16515 512 aa14.65□□□□□ -0.06
NPHP4-203ENST00000378169 UBE2SQ16763 222 aa14.65□□□□□ -0.06
NPHP4-203ENST00000378169 ARHGAP44Q17R89 818 aa14.65□□□□□ -0.06
NPHP4-203ENST00000378169 DGKHQ86XP1 1220 aa14.65□□□□□ -0.06
NPHP4-203ENST00000378169 AMNQ9BXJ7 453 aa14.65□□□□□ -0.06
NPHP4-203ENST00000378169 TMOD4Q9NZQ9 345 aa14.65□□□□□ -0.06
NPHP4-203ENST00000378169 SMIM23A6NLE4 172 aa14.65□□□□□ -0.07
NPHP4-203ENST00000378169 IKBKBO14920 756 aa14.65□□□□□ -0.07
NPHP4-203ENST00000378169 CALUO43852 315 aaPredicted RBP14.65□□□□□ -0.07
NPHP4-203ENST00000378169 TNFAIP3P21580 790 aa14.65□□□□□ -0.07
NPHP4-203ENST00000378169 COPB1P53618 953 aaKnown RBP14.65□□□□□ -0.07
NPHP4-203ENST00000378169 GJA10Q969M2 543 aa14.65□□□□□ -0.07
NPHP4-203ENST00000378169 DIP2BQ9P265 1576 aa14.64□□□□□ -0.07
NPHP4-203ENST00000378169 PTPREP23469 700 aa14.64□□□□□ -0.07
NPHP4-203ENST00000378169 ERCC5P28715 1186 aaPredicted RBP14.64□□□□□ -0.07
NPHP4-203ENST00000378169 ITPK1Q13572 414 aa14.64□□□□□ -0.07
NPHP4-203ENST00000378169 HINFPQ9BQA5 517 aa14.64□□□□□ -0.07
NPHP4-203ENST00000378169 ATP6V0A2Q9Y487 856 aa14.64□□□□□ -0.07
NPHP4-203ENST00000378169 MAP2K1Q02750 393 aaPredicted RBP14.64□□□□□ -0.07
NPHP4-203ENST00000378169 ASPRV1Q53RT3 343 aa14.64□□□□□ -0.07
NPHP4-203ENST00000378169 ZNF34Q8IZ26 560 aa14.64□□□□□ -0.07
NPHP4-203ENST00000378169 FMR1NBQ8N0W7 255 aaPredicted RBP14.64□□□□□ -0.07
NPHP4-203ENST00000378169 TMEM47Q9BQJ4 181 aa14.64□□□□□ -0.07
NPHP4-203ENST00000378169 TUBGCP2Q9BSJ2 902 aa14.64□□□□□ -0.07
NPHP4-203ENST00000378169 PANK4Q9NVE7 773 aa14.64□□□□□ -0.07
NPHP4-203ENST00000378169 AFF2P51816 1311 aa14.64□□□□□ -0.07
NPHP4-203ENST00000378169 B4DLN1 442 aa14.64□□□□□ -0.07
NPHP4-203ENST00000378169 CCDC50Q8IVM0 306 aa14.64□□□□□ -0.07
NPHP4-203ENST00000378169 LARP4BQ92615 738 aaKnown RBP14.64□□□□□ -0.07
NPHP4-203ENST00000378169 TSGA10Q9BZW7 698 aa14.64□□□□□ -0.07
NPHP4-203ENST00000378169 RPAP1Q9BWH6 1393 aaPredicted RBP14.64□□□□□ -0.07
NPHP4-203ENST00000378169 SPATA31D1Q6ZQQ2 1576 aa14.63□□□□□ -0.07
NPHP4-203ENST00000378169 ZBED4O75132 1171 aa14.63□□□□□ -0.07
NPHP4-203ENST00000378169 TICAM2Q86XR7 235 aa14.63□□□□□ -0.07
NPHP4-203ENST00000378169 NOX5Q96PH1 765 aa14.63□□□□□ -0.07
NPHP4-203ENST00000378169 CALCOCO1Q9P1Z2 691 aa14.63□□□□□ -0.07
NPHP4-203ENST00000378169 SNAP25P60880 206 aa14.63□□□□□ -0.07
NPHP4-203ENST00000378169 MIGA2Q7L4E1 593 aa14.63□□□□□ -0.07
NPHP4-203ENST00000378169 CCDC25Q86WR0 208 aa14.63□□□□□ -0.07
NPHP4-203ENST00000378169 PLA2G12BQ9BX93 195 aa14.63□□□□□ -0.07
NPHP4-203ENST00000378169 ZMYND15Q9H091 742 aa14.63□□□□□ -0.07
NPHP4-203ENST00000378169 KANSL2Q9H9L4 492 aa14.63□□□□□ -0.07
NPHP4-203ENST00000378169 SENP2Q9HC62 589 aa14.63□□□□□ -0.07
NPHP4-203ENST00000378169 ARMCX3Q9UH62 379 aaPredicted RBP14.63□□□□□ -0.07
NPHP4-203ENST00000378169 UTYO14607 1347 aa14.63□□□□□ -0.07
NPHP4-203ENST00000378169 RFX7Q2KHR2 1363 aa14.63□□□□□ -0.07
NPHP4-203ENST00000378169 CAMTA2O94983 1202 aa14.63□□□□□ -0.07
NPHP4-203ENST00000378169 TBC1D10BQ4KMP7 808 aaPredicted RBP14.63□□□□□ -0.07
NPHP4-203ENST00000378169 PLA2G4DQ86XP0 818 aa14.63□□□□□ -0.07
NPHP4-203ENST00000378169 TRIM31Q9BZY9 425 aa14.63□□□□□ -0.07
NPHP4-203ENST00000378169 OGFRQ9NZT2 677 aa14.63□□□□□ -0.07
NPHP4-203ENST00000378169 GCOM1H8Y6P7 765 aaPredicted RBP14.62□□□□□ -0.07
NPHP4-203ENST00000378169 FLOT1O75955 427 aa14.62□□□□□ -0.07
NPHP4-203ENST00000378169 MYZAPP0CAP1 466 aa14.62□□□□□ -0.07
NPHP4-203ENST00000378169 XRCC5P13010 732 aaKnown RBP14.62□□□□□ -0.07
NPHP4-203ENST00000378169 ALX1Q15699 326 aa14.62□□□□□ -0.07
NPHP4-203ENST00000378169 VWA3BQ502W6 1294 aa14.62□□□□□ -0.07
NPHP4-203ENST00000378169 SFMBT2Q5VUG0 894 aa14.62□□□□□ -0.07
NPHP4-203ENST00000378169 CC2D2BQ6DHV5 1058 aa14.62□□□□□ -0.07
NPHP4-203ENST00000378169 CNOT6LQ96LI5 555 aaKnown RBP14.62□□□□□ -0.07
NPHP4-203ENST00000378169 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.62□□□□□ -0.07
NPHP4-203ENST00000378169 KDM3AQ9Y4C1 1321 aa14.62□□□□□ -0.07
NPHP4-203ENST00000378169 ZEB2O60315 1214 aa14.62□□□□□ -0.07
NPHP4-203ENST00000378169 C8orf74Q6P047 294 aa14.62□□□□□ -0.07
NPHP4-203ENST00000378169 ATRIPQ8WXE1 791 aa14.62□□□□□ -0.07
NPHP4-203ENST00000378169 PAGE5Q96GU1 130 aa14.62□□□□□ -0.07
NPHP4-203ENST00000378169 LSM14BQ9BX40 385 aaKnown RBP14.62□□□□□ -0.07
NPHP4-203ENST00000378169 MEIS1O00470 390 aa14.62□□□□□ -0.07
NPHP4-203ENST00000378169 SPOPO43791 374 aa14.62□□□□□ -0.07
NPHP4-203ENST00000378169 STX10O60499 249 aa14.62□□□□□ -0.07
NPHP4-203ENST00000378169 POLR2MP0CAP2 368 aa14.62□□□□□ -0.07
NPHP4-203ENST00000378169 PLCG1P19174 1290 aa14.62□□□□□ -0.07
NPHP4-203ENST00000378169 PRPHP41219 470 aa14.62□□□□□ -0.07
NPHP4-203ENST00000378169 GDAQ9Y2T3 454 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms