RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 PP2D1A8MPX8 630 aa17.69■□□□□ 0.42
CKAP4-201ENST00000378026 NKRFO15226 690 aaKnown RBP eCLIP17.69■□□□□ 0.42
CKAP4-201ENST00000378026 EPHB4P54760 987 aa17.69■□□□□ 0.42
CKAP4-201ENST00000378026 ACTN3Q08043 901 aaPredicted RBP17.69■□□□□ 0.42
CKAP4-201ENST00000378026 IFT88Q13099 833 aa17.69■□□□□ 0.42
CKAP4-201ENST00000378026 SDR42E1Q8WUS8 393 aa17.69■□□□□ 0.42
CKAP4-201ENST00000378026 NFU1Q9UMS0 254 aa17.69■□□□□ 0.42
CKAP4-201ENST00000378026 ANO9A1A5B4 782 aa17.69■□□□□ 0.42
CKAP4-201ENST00000378026 TACC1O75410 805 aa17.69■□□□□ 0.42
CKAP4-201ENST00000378026 FAM153BP0C7A2 387 aa17.69■□□□□ 0.42
CKAP4-201ENST00000378026 CHRM1P11229 460 aaPredicted RBP17.69■□□□□ 0.42
CKAP4-201ENST00000378026 RDXP35241 583 aaKnown RBP17.69■□□□□ 0.42
CKAP4-201ENST00000378026 FNTAP49354 379 aa17.69■□□□□ 0.42
CKAP4-201ENST00000378026 FAM153CQ494X1 144 aa17.69■□□□□ 0.42
CKAP4-201ENST00000378026 C8orf74Q6P047 294 aa17.69■□□□□ 0.42
CKAP4-201ENST00000378026 MMGT1Q8N4V1 131 aa17.69■□□□□ 0.42
CKAP4-201ENST00000378026 GIMAP7Q8NHV1 300 aa17.69■□□□□ 0.42
CKAP4-201ENST00000378026 DDX17Q92841 729 aaKnown RBP17.69■□□□□ 0.42
CKAP4-201ENST00000378026 OSBPL9Q96SU4 736 aa17.69■□□□□ 0.42
CKAP4-201ENST00000378026 RNF26Q9BY78 433 aaPredicted RBP17.69■□□□□ 0.42
CKAP4-201ENST00000378026 STIM2Q9P246 746 aa17.69■□□□□ 0.42
CKAP4-201ENST00000378026 FAM153AQ9UHL3 310 aa17.69■□□□□ 0.42
CKAP4-201ENST00000378026 ARHGAP23Q9P227 1491 aa17.69■□□□□ 0.42
CKAP4-201ENST00000378026 NUTM2BA6NNL0 878 aaPredicted RBP17.68■□□□□ 0.42
CKAP4-201ENST00000378026 NUTM2EB1AL46 878 aaPredicted RBP17.68■□□□□ 0.42
CKAP4-201ENST00000378026 HPDP32754 393 aaPredicted RBP17.68■□□□□ 0.42
CKAP4-201ENST00000378026 LSP1P33241 339 aa17.68■□□□□ 0.42
CKAP4-201ENST00000378026 MAP3K12Q12852 859 aa17.68■□□□□ 0.42
CKAP4-201ENST00000378026 NAA35Q5VZE5 725 aa17.68■□□□□ 0.42
CKAP4-201ENST00000378026 BANK1Q8NDB2 785 aa17.68■□□□□ 0.42
CKAP4-201ENST00000378026 IFIH1Q9BYX4 1025 aaKnown RBP17.68■□□□□ 0.42
CKAP4-201ENST00000378026 EXOC1Q9NV70 894 aa17.68■□□□□ 0.42
CKAP4-201ENST00000378026 RMND1Q9NWS8 449 aa17.68■□□□□ 0.42
CKAP4-201ENST00000378026 CEP83Q9Y592 693 aa17.68■□□□□ 0.42
CKAP4-201ENST00000378026 SLIT3O75094 1523 aa17.68■□□□□ 0.42
CKAP4-201ENST00000378026 RASSF10A6NK89 507 aa17.68■□□□□ 0.42
CKAP4-201ENST00000378026 MTIF2P46199 727 aaKnown RBP17.68■□□□□ 0.42
CKAP4-201ENST00000378026 CARSP49589 748 aaKnown RBP17.68■□□□□ 0.42
CKAP4-201ENST00000378026 VAV2P52735 878 aa17.68■□□□□ 0.42
CKAP4-201ENST00000378026 ATP2C1P98194 919 aaPredicted RBP17.68■□□□□ 0.42
CKAP4-201ENST00000378026 CFAP58Q5T655 872 aa17.68■□□□□ 0.42
CKAP4-201ENST00000378026 HAUS3Q68CZ6 603 aa17.68■□□□□ 0.42
CKAP4-201ENST00000378026 ADSSL1Q8N142 457 aa17.68■□□□□ 0.42
CKAP4-201ENST00000378026 CSGALNACT2Q8N6G5 542 aa17.68■□□□□ 0.42
CKAP4-201ENST00000378026 NACAP1Q9BZK3 213 aa17.68■□□□□ 0.42
CKAP4-201ENST00000378026 RBM12Q9NTZ6 932 aaKnown RBP17.68■□□□□ 0.42
CKAP4-201ENST00000378026 BUB1O43683 1085 aa17.68■□□□□ 0.42
CKAP4-201ENST00000378026 MYCNP04198 464 aaPredicted RBP17.68■□□□□ 0.42
CKAP4-201ENST00000378026 VEGFAP15692 232 aaPredicted RBP17.68■□□□□ 0.42
CKAP4-201ENST00000378026 DNM2P50570 870 aa17.68■□□□□ 0.42
CKAP4-201ENST00000378026 ALX1Q15699 326 aa17.68■□□□□ 0.42
CKAP4-201ENST00000378026 C2CD5Q86YS7 1000 aa17.68■□□□□ 0.42
CKAP4-201ENST00000378026 IQSEC3Q9UPP2 1182 aaPredicted RBP17.68■□□□□ 0.42
CKAP4-201ENST00000378026 HDLBPQ00341 1268 aaKnown RBP17.67■□□□□ 0.42
CKAP4-201ENST00000378026 SPATA5Q8NB90 893 aa17.67■□□□□ 0.42
CKAP4-201ENST00000378026 ISCA1Q9BUE6 129 aa17.67■□□□□ 0.42
CKAP4-201ENST00000378026 PPANQ9NQ55 473 aaKnown RBP17.67■□□□□ 0.42
CKAP4-201ENST00000378026 RIC1Q4ADV7 1423 aa17.67■□□□□ 0.42
CKAP4-201ENST00000378026 A0A1W2PQC6 194 aa17.67■□□□□ 0.42
CKAP4-201ENST00000378026 USO1O60763 962 aaKnown RBP17.67■□□□□ 0.42
CKAP4-201ENST00000378026 ECM2O94769 699 aaPredicted RBP17.67■□□□□ 0.42
CKAP4-201ENST00000378026 NLRP5P59047 1200 aa17.67■□□□□ 0.42
CKAP4-201ENST00000378026 SF3B2Q13435 895 aaKnown RBP17.67■□□□□ 0.42
CKAP4-201ENST00000378026 MEA1Q16626 185 aa17.67■□□□□ 0.42
CKAP4-201ENST00000378026 TMTC2Q8N394 836 aa17.67■□□□□ 0.42
CKAP4-201ENST00000378026 TRIM58Q8NG06 486 aa17.67■□□□□ 0.42
CKAP4-201ENST00000378026 STAG1Q8WVM7 1258 aa17.67■□□□□ 0.42
CKAP4-201ENST00000378026 SPATA31A3Q5VYP0 1347 aa17.67■□□□□ 0.42
CKAP4-201ENST00000378026 TMEM94Q12767 1356 aa17.67■□□□□ 0.42
CKAP4-201ENST00000378026 CYP2D7A0A087X1C5 515 aa17.66■□□□□ 0.42
CKAP4-201ENST00000378026 ANKRD18BA2A2Z9 1011 aa17.66■□□□□ 0.42
CKAP4-201ENST00000378026 E7EVH7 732 aa17.66■□□□□ 0.42
CKAP4-201ENST00000378026 ATP2C2O75185 946 aa17.66■□□□□ 0.42
CKAP4-201ENST00000378026 PDE8BO95263 885 aa17.66■□□□□ 0.42
CKAP4-201ENST00000378026 PAFAH1B1P43034 410 aa17.66■□□□□ 0.42
CKAP4-201ENST00000378026 SKOR1P84550 965 aa17.66■□□□□ 0.42
CKAP4-201ENST00000378026 CEP57Q86XR8 500 aa17.66■□□□□ 0.42
CKAP4-201ENST00000378026 DHX37Q8IY37 1157 aaKnown RBP17.66■□□□□ 0.42
CKAP4-201ENST00000378026 ZNF473Q8WTR7 871 aaKnown RBP17.66■□□□□ 0.42
CKAP4-201ENST00000378026 PDS5AQ29RF7 1337 aaKnown RBP17.66■□□□□ 0.42
CKAP4-201ENST00000378026 RGPD5Q99666 1765 aa17.66■□□□□ 0.42
CKAP4-201ENST00000378026 MYH10P35580 1976 aa17.66■□□□□ 0.42
CKAP4-201ENST00000378026 MMP14P50281 582 aa17.66■□□□□ 0.42
CKAP4-201ENST00000378026 GUCY2DQ02846 1103 aa17.66■□□□□ 0.42
CKAP4-201ENST00000378026 ALS2CLQ60I27 953 aa17.66■□□□□ 0.42
CKAP4-201ENST00000378026 FNBP4Q8N3X1 1017 aaPredicted RBP17.66■□□□□ 0.42
CKAP4-201ENST00000378026 EPB41L5Q9HCM4 733 aa17.66■□□□□ 0.42
CKAP4-201ENST00000378026 FAM207AQ9NSI2 230 aaPredicted RBP17.66■□□□□ 0.42
CKAP4-201ENST00000378026 SOS2Q07890 1332 aaPredicted RBP17.66■□□□□ 0.42
CKAP4-201ENST00000378026 ZNF233A6NK53 670 aa17.66■□□□□ 0.42
CKAP4-201ENST00000378026 PSMA7O14818 248 aa17.66■□□□□ 0.42
CKAP4-201ENST00000378026 BMP15O95972 392 aa17.66■□□□□ 0.42
CKAP4-201ENST00000378026 PCCAP05165 728 aaPredicted RBP17.66■□□□□ 0.42
CKAP4-201ENST00000378026 GLI1P08151 1106 aa17.66■□□□□ 0.42
CKAP4-201ENST00000378026 SRGNP10124 158 aa17.66■□□□□ 0.42
CKAP4-201ENST00000378026 EEF1GP26641 437 aaKnown RBP17.66■□□□□ 0.42
CKAP4-201ENST00000378026 ZBED6P86452 979 aa17.66■□□□□ 0.42
CKAP4-201ENST00000378026 RASGRF1Q13972 1273 aa17.66■□□□□ 0.42
CKAP4-201ENST00000378026 EMBQ6PCB8 327 aa17.66■□□□□ 0.42
CKAP4-201ENST00000378026 ZKSCAN4Q969J2 545 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms