RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 TRIM10Q9UDY6 481 aa13.09□□□□□ -0.31
DDR1-227ENST00000376570 SRPRBQ9Y5M8 271 aaKnown RBP13.09□□□□□ -0.31
DDR1-227ENST00000376570 CD44P16070 742 aaKnown RBP13.08□□□□□ -0.32
DDR1-227ENST00000376570 PRAMEF18Q5VWM3 479 aa13.08□□□□□ -0.32
DDR1-227ENST00000376570 E4F1Q66K89 784 aaPredicted RBP13.08□□□□□ -0.32
DDR1-227ENST00000376570 POTEDQ86YR6 584 aa13.08□□□□□ -0.32
DDR1-227ENST00000376570 GJD4Q96KN9 370 aaPredicted RBP13.08□□□□□ -0.32
DDR1-227ENST00000376570 GNA11P29992 359 aa13.08□□□□□ -0.32
DDR1-227ENST00000376570 TROAPQ12815 778 aa13.08□□□□□ -0.32
DDR1-227ENST00000376570 PABPC4Q13310 644 aaKnown RBP eCLIP13.08□□□□□ -0.323e-6■□□□□ 9
DDR1-227ENST00000376570 SF3B2Q13435 895 aaKnown RBP13.08□□□□□ -0.32
DDR1-227ENST00000376570 TXNRD1Q16881 649 aa13.08□□□□□ -0.32
DDR1-227ENST00000376570 LARGE2Q8N3Y3 721 aa13.08□□□□□ -0.32
DDR1-227ENST00000376570 GOLGA6L1Q8N7Z2 621 aa13.08□□□□□ -0.32
DDR1-227ENST00000376570 SRGAP2O75044 1071 aa13.08□□□□□ -0.32
DDR1-227ENST00000376570 KLK7P49862 253 aa13.08□□□□□ -0.32
DDR1-227ENST00000376570 ADCY7P51828 1080 aa13.08□□□□□ -0.32
DDR1-227ENST00000376570 FBXO38Q6PIJ6 1188 aa13.08□□□□□ -0.32
DDR1-227ENST00000376570 KRT27Q7Z3Y8 459 aa13.08□□□□□ -0.32
DDR1-227ENST00000376570 SLF2Q8IX21 1173 aa13.08□□□□□ -0.32
DDR1-227ENST00000376570 WDR24Q96S15 920 aa13.08□□□□□ -0.32
DDR1-227ENST00000376570 POLLQ9UGP5 575 aa13.08□□□□□ -0.32
DDR1-227ENST00000376570 PCDHA1Q9Y5I3 950 aa13.08□□□□□ -0.32
DDR1-227ENST00000376570 PRCPP42785 496 aa13.07□□□□□ -0.32
DDR1-227ENST00000376570 CCZ1BP86790 482 aa13.07□□□□□ -0.32
DDR1-227ENST00000376570 CCZ1P86791 482 aaPredicted RBP13.07□□□□□ -0.32
DDR1-227ENST00000376570 PPP2R3AQ06190 1150 aa13.07□□□□□ -0.32
DDR1-227ENST00000376570 AOC3Q16853 763 aa13.07□□□□□ -0.32
DDR1-227ENST00000376570 CLEC4GQ6UXB4 293 aa13.07□□□□□ -0.32
DDR1-227ENST00000376570 DNAAF5Q86Y56 855 aa13.07□□□□□ -0.32
DDR1-227ENST00000376570 FMN2Q9NZ56 1722 aa13.07□□□□□ -0.32
DDR1-227ENST00000376570 PRPF3O43395 683 aaKnown RBP13.07□□□□□ -0.32
DDR1-227ENST00000376570 BUB1O43683 1085 aa13.07□□□□□ -0.32
DDR1-227ENST00000376570 SLFN14P0C7P3 912 aa13.07□□□□□ -0.32
DDR1-227ENST00000376570 ATF5Q9Y2D1 282 aaPredicted RBP13.07□□□□□ -0.32
DDR1-227ENST00000376570 TNS2Q63HR2 1409 aa13.07□□□□□ -0.32
DDR1-227ENST00000376570 SPDYE3A6NKU9 549 aa13.07□□□□□ -0.32
DDR1-227ENST00000376570 SEPT2Q15019 361 aa13.07□□□□□ -0.32
DDR1-227ENST00000376570 SYCP1Q15431 976 aa13.07□□□□□ -0.32
DDR1-227ENST00000376570 HSP90B2PQ58FF3 399 aa13.07□□□□□ -0.32
DDR1-227ENST00000376570 ZCCHC17Q9NP64 241 aaKnown RBP13.07□□□□□ -0.32
DDR1-227ENST00000376570 NPHP3-ACAD11A0A0J9YXS1 232 aa13.06□□□□□ -0.32
DDR1-227ENST00000376570 BMP6P22004 513 aa13.06□□□□□ -0.32
DDR1-227ENST00000376570 BMS1Q14692 1282 aaKnown RBP13.06□□□□□ -0.32
DDR1-227ENST00000376570 SV2BQ7L1I2 683 aa13.06□□□□□ -0.32
DDR1-227ENST00000376570 OGFOD1Q8N543 542 aa13.06□□□□□ -0.32
DDR1-227ENST00000376570 TEKT1Q969V4 418 aa13.06□□□□□ -0.32
DDR1-227ENST00000376570 CCDC42Q96M95 316 aa13.06□□□□□ -0.32
DDR1-227ENST00000376570 TIGD1Q96MW7 591 aa13.06□□□□□ -0.32
DDR1-227ENST00000376570 ALDH8A1Q9H2A2 487 aaPredicted RBP13.06□□□□□ -0.32
DDR1-227ENST00000376570 KIAA1024Q9UPX6 916 aa13.06□□□□□ -0.32
DDR1-227ENST00000376570 KIF20AO95235 890 aa13.06□□□□□ -0.32
DDR1-227ENST00000376570 ETF1P62495 437 aaKnown RBP13.06□□□□□ -0.32
DDR1-227ENST00000376570 KMT5BQ4FZB7 885 aa13.06□□□□□ -0.32
DDR1-227ENST00000376570 RRAGAQ7L523 313 aa13.06□□□□□ -0.32
DDR1-227ENST00000376570 KSR1Q8IVT5 923 aa13.06□□□□□ -0.32
DDR1-227ENST00000376570 PSTPIP2Q9H939 334 aa13.06□□□□□ -0.32
DDR1-227ENST00000376570 SERPINB13Q9UIV8 391 aa13.06□□□□□ -0.32
DDR1-227ENST00000376570 PCDHB13Q9Y5F0 798 aa13.06□□□□□ -0.32
DDR1-227ENST00000376570 OR52Z1P0C646 297 aa13.06□□□□□ -0.32
DDR1-227ENST00000376570 KRT31Q15323 416 aa13.06□□□□□ -0.32
DDR1-227ENST00000376570 TPH2Q8IWU9 490 aa13.06□□□□□ -0.32
DDR1-227ENST00000376570 CCDC155Q8N6L0 562 aa13.06□□□□□ -0.32
DDR1-227ENST00000376570 ZNF384Q8TF68 577 aa13.06□□□□□ -0.32
DDR1-227ENST00000376570 CCP110O43303 1012 aa13.05□□□□□ -0.32
DDR1-227ENST00000376570 PKN1Q16512 942 aa13.05□□□□□ -0.32
DDR1-227ENST00000376570 CERKLQ49MI3 558 aaPredicted RBP13.05□□□□□ -0.32
DDR1-227ENST00000376570 ADAT2Q7Z6V5 191 aaKnown RBP13.05□□□□□ -0.32
DDR1-227ENST00000376570 NEK8Q86SG6 692 aa13.05□□□□□ -0.32
DDR1-227ENST00000376570 SLC35F6Q8N357 371 aa13.05□□□□□ -0.32
DDR1-227ENST00000376570 MAP3K14Q99558 947 aa13.05□□□□□ -0.32
DDR1-227ENST00000376570 PCDHA4Q9UN74 947 aa13.05□□□□□ -0.32
DDR1-227ENST00000376570 H0YIN7 160 aa13.05□□□□□ -0.32
DDR1-227ENST00000376570 MYCLP12524 364 aaPredicted RBP13.05□□□□□ -0.32
DDR1-227ENST00000376570 C12orf60Q5U649 245 aa13.05□□□□□ -0.32
DDR1-227ENST00000376570 FBXO33Q7Z6M2 555 aa13.05□□□□□ -0.32
DDR1-227ENST00000376570 C10orf67Q8IYJ2 551 aa13.05□□□□□ -0.32
DDR1-227ENST00000376570 SYCP3Q8IZU3 236 aa13.05□□□□□ -0.32
DDR1-227ENST00000376570 TBC1D16Q8TBP0 767 aa13.05□□□□□ -0.32
DDR1-227ENST00000376570 FERMT2Q96AC1 680 aa13.05□□□□□ -0.32
DDR1-227ENST00000376570 SPAG5Q96R06 1193 aa13.05□□□□□ -0.32
DDR1-227ENST00000376570 CHP1Q99653 195 aa13.05□□□□□ -0.32
DDR1-227ENST00000376570 FAM107BQ9H098 131 aa13.05□□□□□ -0.32
DDR1-227ENST00000376570 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.05□□□□□ -0.32
DDR1-227ENST00000376570 TMEM110-MUSTN1A8MSY1 372 aa13.05□□□□□ -0.32
DDR1-227ENST00000376570 SF3B3Q15393 1217 aaKnown RBP13.05□□□□□ -0.32
DDR1-227ENST00000376570 ZFPM1Q8IX07 1006 aa13.05□□□□□ -0.32
DDR1-227ENST00000376570 PROCA1Q8NCQ7 364 aaPredicted RBP13.05□□□□□ -0.32
DDR1-227ENST00000376570 RAB34Q9BZG1 259 aa13.05□□□□□ -0.32
DDR1-227ENST00000376570 HDAC6Q9UBN7 1215 aa13.05□□□□□ -0.32
DDR1-227ENST00000376570 CLIC2O15247 247 aa13.04□□□□□ -0.32
DDR1-227ENST00000376570 COPB1P53618 953 aaKnown RBP13.04□□□□□ -0.32
DDR1-227ENST00000376570 SPATA1Q5VX52 437 aa13.04□□□□□ -0.32
DDR1-227ENST00000376570 SLFN13Q68D06 897 aa13.04□□□□□ -0.32
DDR1-227ENST00000376570 NSMFQ6X4W1 530 aa13.04□□□□□ -0.32
DDR1-227ENST00000376570 KRT26Q7Z3Y9 468 aa13.04□□□□□ -0.32
DDR1-227ENST00000376570 VSTM4Q8IW00 320 aa13.04□□□□□ -0.32
DDR1-227ENST00000376570 CSRNP1Q96S65 589 aa13.04□□□□□ -0.32
DDR1-227ENST00000376570 BRIP1Q9BX63 1249 aa13.04□□□□□ -0.32
DDR1-227ENST00000376570 AGXT2Q9BYV1 514 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms