RNA–Protein interactions for RNA: ENST00000375887.8

TNFSF13B-201, Transcript of TNF superfamily member 13b, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-201ENST00000375887 TTI2Q6NXR4 508 aa13.94□□□□□ -0.18
TNFSF13B-201ENST00000375887 ANKRD20A12PQ8NF67 263 aa13.94□□□□□ -0.18
TNFSF13B-201ENST00000375887 TRERF1Q96PN7 1200 aa13.94□□□□□ -0.18
TNFSF13B-201ENST00000375887 AGPAT5Q9NUQ2 364 aa13.94□□□□□ -0.18
TNFSF13B-201ENST00000375887 KBTBD4Q9NVX7 518 aa13.94□□□□□ -0.18
TNFSF13B-201ENST00000375887 MYO6Q9UM54 1294 aa13.94□□□□□ -0.18
TNFSF13B-201ENST00000375887 RREB1Q92766 1687 aa13.93□□□□□ -0.18
TNFSF13B-201ENST00000375887 CTAGE15A4D2H0 777 aa13.93□□□□□ -0.18
TNFSF13B-201ENST00000375887 CTAGE8P0CG41 777 aa13.93□□□□□ -0.18
TNFSF13B-201ENST00000375887 GOLGA8HP0CJ92 632 aa13.93□□□□□ -0.18
TNFSF13B-201ENST00000375887 TRIM14Q14142 442 aa13.93□□□□□ -0.18
TNFSF13B-201ENST00000375887 CTAGE6Q86UF2 777 aa13.93□□□□□ -0.18
TNFSF13B-201ENST00000375887 DGKHQ86XP1 1220 aa13.93□□□□□ -0.18
TNFSF13B-201ENST00000375887 CTAGE4Q8IX94 777 aa13.93□□□□□ -0.18
TNFSF13B-201ENST00000375887 DNAJC7Q99615 494 aa13.93□□□□□ -0.18
TNFSF13B-201ENST00000375887 DUSP9Q99956 384 aaKnown RBP13.93□□□□□ -0.18
TNFSF13B-201ENST00000375887 CCDC194A0A1B0GVG4 234 aa13.93□□□□□ -0.18
TNFSF13B-201ENST00000375887 B4DLN1 442 aa13.93□□□□□ -0.18
TNFSF13B-201ENST00000375887 SRGAP2O75044 1071 aa13.93□□□□□ -0.18
TNFSF13B-201ENST00000375887 TUBB2AQ13885 445 aa13.93□□□□□ -0.18
TNFSF13B-201ENST00000375887 HEATR3Q7Z4Q2 680 aa13.93□□□□□ -0.18
TNFSF13B-201ENST00000375887 RASSF8Q8NHQ8 419 aa13.93□□□□□ -0.18
TNFSF13B-201ENST00000375887 SH3RF3Q8TEJ3 882 aaPredicted RBP13.93□□□□□ -0.18
TNFSF13B-201ENST00000375887 TUBB2BQ9BVA1 445 aa13.93□□□□□ -0.18
TNFSF13B-201ENST00000375887 SH3GLB2Q9NR46 395 aa13.93□□□□□ -0.18
TNFSF13B-201ENST00000375887 RNF216Q9NWF9 866 aaPredicted RBP13.93□□□□□ -0.18
TNFSF13B-201ENST00000375887 LUC7L2Q9Y383 392 aaKnown RBP13.93□□□□□ -0.18
TNFSF13B-201ENST00000375887 RCCD1A6NED2 376 aa13.92□□□□□ -0.18
TNFSF13B-201ENST00000375887 RHOBTB3O94955 611 aa13.92□□□□□ -0.18
TNFSF13B-201ENST00000375887 UBA7P41226 1012 aa13.92□□□□□ -0.18
TNFSF13B-201ENST00000375887 GRM4Q14833 912 aa13.92□□□□□ -0.18
TNFSF13B-201ENST00000375887 DIXDC1Q155Q3 683 aa13.92□□□□□ -0.18
TNFSF13B-201ENST00000375887 WHAMMP3Q1A5X7 153 aa13.92□□□□□ -0.18
TNFSF13B-201ENST00000375887 GIMAP8Q8ND71 665 aaPredicted RBP13.92□□□□□ -0.18
TNFSF13B-201ENST00000375887 IPO4Q8TEX9 1081 aaKnown RBP13.92□□□□□ -0.18
TNFSF13B-201ENST00000375887 CDCA7Q9BWT1 371 aaPredicted RBP13.92□□□□□ -0.18
TNFSF13B-201ENST00000375887 CALCOCO1Q9P1Z2 691 aa13.92□□□□□ -0.18
TNFSF13B-201ENST00000375887 MYO1AQ9UBC5 1043 aa13.92□□□□□ -0.18
TNFSF13B-201ENST00000375887 CAPN11Q9UMQ6 739 aa13.92□□□□□ -0.18
TNFSF13B-201ENST00000375887 STXBP3O00186 592 aa13.92□□□□□ -0.18
TNFSF13B-201ENST00000375887 KCNB1Q14721 858 aa13.92□□□□□ -0.18
TNFSF13B-201ENST00000375887 HDXQ7Z353 690 aa13.92□□□□□ -0.18
TNFSF13B-201ENST00000375887 TRIM47Q96LD4 638 aa13.92□□□□□ -0.18
TNFSF13B-201ENST00000375887 LACRTQ9GZZ8 138 aa13.92□□□□□ -0.18
TNFSF13B-201ENST00000375887 VGLL3A8MV65 326 aa13.91□□□□□ -0.18
TNFSF13B-201ENST00000375887 ATP1A1P05023 1023 aaKnown RBP13.91□□□□□ -0.18
TNFSF13B-201ENST00000375887 TM4SF1P30408 202 aa13.91□□□□□ -0.18
TNFSF13B-201ENST00000375887 TRAPPC11Q7Z392 1133 aa13.91□□□□□ -0.18
TNFSF13B-201ENST00000375887 AMIGO3Q86WK7 504 aa13.91□□□□□ -0.18
TNFSF13B-201ENST00000375887 DZIP1Q86YF9 867 aaKnown RBP13.91□□□□□ -0.18
TNFSF13B-201ENST00000375887 ANKS1AQ92625 1134 aa13.91□□□□□ -0.18
TNFSF13B-201ENST00000375887 HINFPQ9BQA5 517 aa13.91□□□□□ -0.18
TNFSF13B-201ENST00000375887 CCSER1Q9C0I3 900 aa13.91□□□□□ -0.18
TNFSF13B-201ENST00000375887 SAP30BPQ9UHR5 308 aaKnown RBP13.91□□□□□ -0.18
TNFSF13B-201ENST00000375887 DUSP10Q9Y6W6 482 aa13.91□□□□□ -0.18
TNFSF13B-201ENST00000375887 PDS5AQ29RF7 1337 aaKnown RBP13.91□□□□□ -0.18
TNFSF13B-201ENST00000375887 IRS2Q9Y4H2 1338 aa13.91□□□□□ -0.18
TNFSF13B-201ENST00000375887 KIAA1551Q9HCM1 1747 aa13.91□□□□□ -0.18
TNFSF13B-201ENST00000375887 A0A1W2PQC6 194 aa13.91□□□□□ -0.18
TNFSF13B-201ENST00000375887 PLCG1P19174 1290 aa13.91□□□□□ -0.18
TNFSF13B-201ENST00000375887 ERCC3P19447 782 aa13.91□□□□□ -0.18
TNFSF13B-201ENST00000375887 EEF1GP26641 437 aaKnown RBP13.91□□□□□ -0.18
TNFSF13B-201ENST00000375887 PIP4K2BP78356 416 aa13.91□□□□□ -0.18
TNFSF13B-201ENST00000375887 IRX5P78411 483 aaPredicted RBP13.91□□□□□ -0.18
TNFSF13B-201ENST00000375887 STK4Q13043 487 aa13.91□□□□□ -0.18
TNFSF13B-201ENST00000375887 TXNRD1Q16881 649 aa13.91□□□□□ -0.18
TNFSF13B-201ENST00000375887 ANKRD40Q6AI12 368 aa13.91□□□□□ -0.18
TNFSF13B-201ENST00000375887 HPS3Q969F9 1004 aa13.91□□□□□ -0.18
TNFSF13B-201ENST00000375887 NLRP3Q96P20 1036 aa13.91□□□□□ -0.18
TNFSF13B-201ENST00000375887 TTYH3Q9C0H2 523 aa13.91□□□□□ -0.18
TNFSF13B-201ENST00000375887 THAP9Q9H5L6 903 aa13.91□□□□□ -0.18
TNFSF13B-201ENST00000375887 BARHL2Q9NY43 387 aa13.91□□□□□ -0.18
TNFSF13B-201ENST00000375887 COL22A1Q8NFW1 1626 aaPredicted RBP13.91□□□□□ -0.18
TNFSF13B-201ENST00000375887 FLT1P17948 1338 aa13.91□□□□□ -0.18
TNFSF13B-201ENST00000375887 POTEB2H3BUK9 544 aa13.9□□□□□ -0.18
TNFSF13B-201ENST00000375887 PSMD14O00487 310 aa13.9□□□□□ -0.18
TNFSF13B-201ENST00000375887 FCER1AP12319 257 aa13.9□□□□□ -0.18
TNFSF13B-201ENST00000375887 MMS19Q96T76 1030 aa13.9□□□□□ -0.18
TNFSF13B-201ENST00000375887 TMEM47Q9BQJ4 181 aa13.9□□□□□ -0.18
TNFSF13B-201ENST00000375887 TUBGCP2Q9BSJ2 902 aa13.9□□□□□ -0.18
TNFSF13B-201ENST00000375887 MKNK2Q9HBH9 465 aa13.9□□□□□ -0.18
TNFSF13B-201ENST00000375887 STX8Q9UNK0 236 aa13.9□□□□□ -0.18
TNFSF13B-201ENST00000375887 PALM3A6NDB9 673 aaPredicted RBP13.9□□□□□ -0.18
TNFSF13B-201ENST00000375887 LRRIQ3A6PVS8 624 aaPredicted RBP13.9□□□□□ -0.18
TNFSF13B-201ENST00000375887 PSMA7O14818 248 aa13.9□□□□□ -0.18
TNFSF13B-201ENST00000375887 SRGNP10124 158 aa13.9□□□□□ -0.18
TNFSF13B-201ENST00000375887 CASP8Q14790 479 aa13.9□□□□□ -0.18
TNFSF13B-201ENST00000375887 CCDC122Q5T0U0 273 aa13.9□□□□□ -0.18
TNFSF13B-201ENST00000375887 CSGALNACT2Q8N6G5 542 aa13.9□□□□□ -0.18
TNFSF13B-201ENST00000375887 TGFBRAP1Q8WUH2 860 aa13.9□□□□□ -0.18
TNFSF13B-201ENST00000375887 VPS18Q9P253 973 aa13.9□□□□□ -0.18
TNFSF13B-201ENST00000375887 LMAN1P49257 510 aa13.89□□□□□ -0.19
TNFSF13B-201ENST00000375887 MEA1Q16626 185 aa13.89□□□□□ -0.19
TNFSF13B-201ENST00000375887 NBPF5PQ86XG9 351 aaPredicted RBP13.89□□□□□ -0.19
TNFSF13B-201ENST00000375887 DAGLBQ8NCG7 672 aa13.89□□□□□ -0.19
TNFSF13B-201ENST00000375887 SMARCC1Q92922 1105 aaPredicted RBP13.89□□□□□ -0.19
TNFSF13B-201ENST00000375887 TRIM9Q9C026 710 aa13.89□□□□□ -0.19
TNFSF13B-201ENST00000375887 HAUS4Q9H6D7 363 aa13.89□□□□□ -0.19
TNFSF13B-201ENST00000375887 THRAP3Q9Y2W1 955 aaKnown RBP13.89□□□□□ -0.19
TNFSF13B-201ENST00000375887 TSPY3P0CV98 308 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms