RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 HNRNPH2P55795 449 aaKnown RBP7.25□□□□□ -1.25
SMC1A-202ENST00000375340 NAA25Q14CX7 972 aa7.25□□□□□ -1.25
SMC1A-202ENST00000375340 SHC4Q6S5L8 630 aa7.25□□□□□ -1.25
SMC1A-202ENST00000375340 MYCT1Q8N699 235 aa7.25□□□□□ -1.25
SMC1A-202ENST00000375340 CNBD1Q8NA66 436 aa7.25□□□□□ -1.25
SMC1A-202ENST00000375340 SYNCQ9H7C4 482 aa7.25□□□□□ -1.25
SMC1A-202ENST00000375340 USP42Q9H9J4 1324 aaKnown RBP7.25□□□□□ -1.25
SMC1A-202ENST00000375340 UBE3CQ15386 1083 aa7.25□□□□□ -1.25
SMC1A-202ENST00000375340 RPS6KA1Q15418 735 aa7.25□□□□□ -1.25
SMC1A-202ENST00000375340 PARP10Q53GL7 1025 aa7.25□□□□□ -1.25
SMC1A-202ENST00000375340 GPR108Q9NPR9 543 aa7.25□□□□□ -1.25
SMC1A-202ENST00000375340 HYOU1Q9Y4L1 999 aa7.25□□□□□ -1.25
SMC1A-202ENST00000375340 ANKRD65E5RJM6 399 aa7.25□□□□□ -1.25
SMC1A-202ENST00000375340 UAP1Q16222 522 aaPredicted RBP7.25□□□□□ -1.25
SMC1A-202ENST00000375340 PEX26Q7Z412 305 aa7.25□□□□□ -1.25
SMC1A-202ENST00000375340 USP31Q70CQ4 1352 aa7.24□□□□□ -1.25
SMC1A-202ENST00000375340 PNMA1Q8ND90 353 aa7.24□□□□□ -1.25
SMC1A-202ENST00000375340 TUBGCP2Q9BSJ2 902 aa7.24□□□□□ -1.25
SMC1A-202ENST00000375340 NPHP4O75161 1426 aaPredicted RBP7.24□□□□□ -1.25
SMC1A-202ENST00000375340 SNAP23O00161 211 aa7.24□□□□□ -1.25
SMC1A-202ENST00000375340 SPOPO43791 374 aa7.24□□□□□ -1.25
SMC1A-202ENST00000375340 CYP2D6P10635 497 aa7.24□□□□□ -1.25
SMC1A-202ENST00000375340 PLCG2P16885 1265 aa7.24□□□□□ -1.25
SMC1A-202ENST00000375340 CTNNA1P35221 906 aaKnown RBP7.24□□□□□ -1.25
SMC1A-202ENST00000375340 CYP2J2P51589 502 aa7.24□□□□□ -1.25
SMC1A-202ENST00000375340 GUCY2DQ02846 1103 aa7.24□□□□□ -1.25
SMC1A-202ENST00000375340 POTEDQ86YR6 584 aa7.24□□□□□ -1.25
SMC1A-202ENST00000375340 ANKRD7Q92527 254 aa7.24□□□□□ -1.25
SMC1A-202ENST00000375340 PANX2Q96RD6 677 aa7.24□□□□□ -1.25
SMC1A-202ENST00000375340 TRIM58Q8NG06 486 aa7.24□□□□□ -1.25
SMC1A-202ENST00000375340 ERBB3P21860 1342 aa7.24□□□□□ -1.25
SMC1A-202ENST00000375340 FTCDO95954 541 aa7.24□□□□□ -1.25
SMC1A-202ENST00000375340 CC2D1AQ6P1N0 951 aaPredicted RBP7.24□□□□□ -1.25
SMC1A-202ENST00000375340 TEX33O43247 280 aa7.24□□□□□ -1.25
SMC1A-202ENST00000375340 EZRP15311 586 aaKnown RBP7.24□□□□□ -1.25
SMC1A-202ENST00000375340 SCARF1Q14162 830 aa7.24□□□□□ -1.25
SMC1A-202ENST00000375340 UHMK1Q8TAS1 419 aaKnown RBP7.24□□□□□ -1.25
SMC1A-202ENST00000375340 GDAQ9Y2T3 454 aa7.24□□□□□ -1.25
SMC1A-202ENST00000375340 SRPRBQ9Y5M8 271 aaKnown RBP7.24□□□□□ -1.25
SMC1A-202ENST00000375340 USP17L8P0C7I0 530 aa7.24□□□□□ -1.25
SMC1A-202ENST00000375340 PRPHP41219 470 aa7.24□□□□□ -1.25
SMC1A-202ENST00000375340 ATG9AQ7Z3C6 839 aa7.24□□□□□ -1.25
SMC1A-202ENST00000375340 SENP2Q9HC62 589 aa7.24□□□□□ -1.25
SMC1A-202ENST00000375340 ZCCHC17Q9NP64 241 aaKnown RBP7.24□□□□□ -1.25
SMC1A-202ENST00000375340 ZBTB1Q9Y2K1 713 aa7.24□□□□□ -1.25
SMC1A-202ENST00000375340 USP17L3A6NCW0 530 aa7.24□□□□□ -1.25
SMC1A-202ENST00000375340 USP17L4A6NCW7 530 aa7.24□□□□□ -1.25
SMC1A-202ENST00000375340 CTDNEP1O95476 244 aa7.24□□□□□ -1.25
SMC1A-202ENST00000375340 TUBBP07437 444 aa7.24□□□□□ -1.25
SMC1A-202ENST00000375340 EHHADHQ08426 723 aa7.24□□□□□ -1.25
SMC1A-202ENST00000375340 NAA35Q5VZE5 725 aa7.24□□□□□ -1.25
SMC1A-202ENST00000375340 USP17L1Q7RTZ2 530 aa7.24□□□□□ -1.25
SMC1A-202ENST00000375340 KRIT1O00522 736 aa7.24□□□□□ -1.25
SMC1A-202ENST00000375340 METTL16Q86W50 562 aaKnown RBP7.24□□□□□ -1.25
SMC1A-202ENST00000375340 RDH13Q8NBN7 331 aa7.24□□□□□ -1.25
SMC1A-202ENST00000375340 MTRF1LQ9UGC7 380 aaKnown RBP7.24□□□□□ -1.25
SMC1A-202ENST00000375340 ATP6V0A2Q9Y487 856 aa7.24□□□□□ -1.25
SMC1A-202ENST00000375340 LONP1P36776 959 aaKnown RBP7.23□□□□□ -1.25
SMC1A-202ENST00000375340 MXRA7P84157 204 aa7.23□□□□□ -1.25
SMC1A-202ENST00000375340 ABCC12Q96J65 1359 aa7.23□□□□□ -1.25
SMC1A-202ENST00000375340 HARSP12081 509 aaKnown RBP7.23□□□□□ -1.25
SMC1A-202ENST00000375340 BTDP43251 543 aa7.23□□□□□ -1.25
SMC1A-202ENST00000375340 CYP27A1Q02318 531 aa7.23□□□□□ -1.25
SMC1A-202ENST00000375340 PPFIA1Q13136 1202 aa7.23□□□□□ -1.25
SMC1A-202ENST00000375340 FAM98CQ17RN3 349 aaKnown RBP7.23□□□□□ -1.25
SMC1A-202ENST00000375340 GGA1Q9UJY5 639 aa7.23□□□□□ -1.25
SMC1A-202ENST00000375340 PCDHA13Q9Y5I0 950 aa7.23□□□□□ -1.25
SMC1A-202ENST00000375340 IKBKGQ9Y6K9 419 aa7.23□□□□□ -1.25
SMC1A-202ENST00000375340 KNDC1Q76NI1 1749 aa7.23□□□□□ -1.25
SMC1A-202ENST00000375340 H7C1D1 291 aa7.23□□□□□ -1.25
SMC1A-202ENST00000375340 VWA3BQ502W6 1294 aa7.23□□□□□ -1.25
SMC1A-202ENST00000375340 TPH2Q8IWU9 490 aa7.23□□□□□ -1.25
SMC1A-202ENST00000375340 OSBPL5Q9H0X9 879 aaPredicted RBP7.23□□□□□ -1.25
SMC1A-202ENST00000375340 HOMER2Q9NSB8 354 aa7.23□□□□□ -1.25
SMC1A-202ENST00000375340 CTTNBP2NLQ9P2B4 639 aa7.23□□□□□ -1.25
SMC1A-202ENST00000375340 SWAP70Q9UH65 585 aa7.23□□□□□ -1.25
SMC1A-202ENST00000375340 CCNL1Q9UK58 526 aaPredicted RBP7.23□□□□□ -1.25
SMC1A-202ENST00000375340 STK38LQ9Y2H1 464 aa7.23□□□□□ -1.25
SMC1A-202ENST00000375340 PLCG1P19174 1290 aa7.23□□□□□ -1.25
SMC1A-202ENST00000375340 SCNN1DP51172 638 aa7.23□□□□□ -1.25
SMC1A-202ENST00000375340 FMR1Q06787 632 aaKnown RBP eCLIP7.23□□□□□ -1.258e-7■■■□□ 16.5
SMC1A-202ENST00000375340 TBC1D10BQ4KMP7 808 aaPredicted RBP7.23□□□□□ -1.25
SMC1A-202ENST00000375340 NLRP10Q86W26 655 aa7.23□□□□□ -1.25
SMC1A-202ENST00000375340 MRFAP1Q9Y605 127 aa7.23□□□□□ -1.25
SMC1A-202ENST00000375340 MORC2Q9Y6X9 1032 aaPredicted RBP7.23□□□□□ -1.25
SMC1A-202ENST00000375340 H7C1W4 665 aa7.23□□□□□ -1.25
SMC1A-202ENST00000375340 CYP27B1O15528 508 aa7.23□□□□□ -1.25
SMC1A-202ENST00000375340 DNM2P50570 870 aa7.23□□□□□ -1.25
SMC1A-202ENST00000375340 CASP8Q14790 479 aa7.23□□□□□ -1.25
SMC1A-202ENST00000375340 PRR16Q569H4 304 aa7.23□□□□□ -1.25
SMC1A-202ENST00000375340 NCK2O43639 380 aa7.23□□□□□ -1.25
SMC1A-202ENST00000375340 SNAP25P60880 206 aa7.23□□□□□ -1.25
SMC1A-202ENST00000375340 IQCB1Q15051 598 aa7.23□□□□□ -1.25
SMC1A-202ENST00000375340 E4F1Q66K89 784 aaPredicted RBP7.23□□□□□ -1.25
SMC1A-202ENST00000375340 UBL4BQ8N7F7 174 aa7.23□□□□□ -1.25
SMC1A-202ENST00000375340 ABHD10Q9NUJ1 306 aa7.23□□□□□ -1.25
SMC1A-202ENST00000375340 USTQ9Y2C2 406 aa7.23□□□□□ -1.25
SMC1A-202ENST00000375340 NEURL4Q96JN8 1562 aa7.23□□□□□ -1.25
SMC1A-202ENST00000375340 CLNS1AP54105 237 aaKnown RBP7.23□□□□□ -1.25
SMC1A-202ENST00000375340 TRAPPC3LQ5T215 181 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms