RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 TFAP4Q01664 338 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 UPF3AQ9H1J1 476 aaKnown RBP7.22□□□□□ -1.25
UBR4-204ENST00000375254 CCDC134Q9H6E4 229 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 NFE2L3Q9Y4A8 694 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 AXIN1O15169 862 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 ZBTB43O43298 467 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 ANP32DO95626 131 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 EPB41P11171 864 aaKnown RBP7.22□□□□□ -1.25
UBR4-204ENST00000375254 FKBP4Q02790 459 aaKnown RBP eCLIP7.22□□□□□ -1.25
UBR4-204ENST00000375254 TMEM154Q6P9G4 183 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 PKD2L2Q9NZM6 624 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 PAK1Q13153 545 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 OSBPL5Q9H0X9 879 aaPredicted RBP7.22□□□□□ -1.25
UBR4-204ENST00000375254 ANLNQ9NQW6 1124 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 CAB39Q9Y376 341 aaPredicted RBP7.22□□□□□ -1.25
UBR4-204ENST00000375254 P4HA2O15460 535 aa7.21□□□□□ -1.25
UBR4-204ENST00000375254 FAM107AO95990 144 aa7.21□□□□□ -1.25
UBR4-204ENST00000375254 ADCY8P40145 1251 aa7.21□□□□□ -1.25
UBR4-204ENST00000375254 MAP3K10Q02779 954 aa7.21□□□□□ -1.25
UBR4-204ENST00000375254 CYTH1Q15438 398 aa7.21□□□□□ -1.25
UBR4-204ENST00000375254 NLRP14Q86W24 1093 aa7.21□□□□□ -1.25
UBR4-204ENST00000375254 EGFL6Q8IUX8 553 aa7.21□□□□□ -1.25
UBR4-204ENST00000375254 RASSF5Q8WWW0 418 aa7.21□□□□□ -1.25
UBR4-204ENST00000375254 TRIM8Q9BZR9 551 aa7.21□□□□□ -1.25
UBR4-204ENST00000375254 IFT122Q9HBG6 1241 aa7.21□□□□□ -1.25
UBR4-204ENST00000375254 WDR37Q9Y2I8 494 aa7.21□□□□□ -1.25
UBR4-204ENST00000375254 ZNF330Q9Y3S2 320 aaPredicted RBP7.21□□□□□ -1.25
UBR4-204ENST00000375254 B4DLN1 442 aa7.21□□□□□ -1.25
UBR4-204ENST00000375254 MAFGO15525 162 aa7.21□□□□□ -1.25
UBR4-204ENST00000375254 FMNL1O95466 1100 aaPredicted RBP7.21□□□□□ -1.25
UBR4-204ENST00000375254 MRPL12P52815 198 aaKnown RBP7.21□□□□□ -1.25
UBR4-204ENST00000375254 CNGA3Q16281 694 aa7.21□□□□□ -1.25
UBR4-204ENST00000375254 MMEL1Q495T6 779 aa7.21□□□□□ -1.25
UBR4-204ENST00000375254 PPP1R2P3Q6NXS1 205 aa7.21□□□□□ -1.25
UBR4-204ENST00000375254 DISC1Q9NRI5 854 aa7.21□□□□□ -1.25
UBR4-204ENST00000375254 CAAP1Q9H8G2 361 aa7.21□□□□□ -1.25
UBR4-204ENST00000375254 DNAJC12Q9UKB3 198 aa7.21□□□□□ -1.25
UBR4-204ENST00000375254 NKTRP30414 1462 aaKnown RBP7.21□□□□□ -1.26
UBR4-204ENST00000375254 GNAT2P19087 354 aa7.21□□□□□ -1.26
UBR4-204ENST00000375254 PSMA4P25789 261 aaKnown RBP7.21□□□□□ -1.26
UBR4-204ENST00000375254 CRNKL1Q9BZJ0 848 aaKnown RBP7.21□□□□□ -1.26
UBR4-204ENST00000375254 BLOC1S6Q9UL45 172 aa7.21□□□□□ -1.26
UBR4-204ENST00000375254 CCDC144BQ3MJ40 725 aa7.21□□□□□ -1.26
UBR4-204ENST00000375254 RBM20Q5T481 1227 aaKnown RBP7.21□□□□□ -1.26
UBR4-204ENST00000375254 KIRREL3Q8IZU9 778 aa7.21□□□□□ -1.26
UBR4-204ENST00000375254 A1CFQ9NQ94 594 aaKnown RBP7.21□□□□□ -1.26
UBR4-204ENST00000375254 OLFML3Q9NRN5 406 aa7.21□□□□□ -1.26
UBR4-204ENST00000375254 NANOGNBQ7Z5D8 188 aa7.21□□□□□ -1.26
UBR4-204ENST00000375254 CARD9Q9H257 536 aa7.21□□□□□ -1.26
UBR4-204ENST00000375254 KRT76Q01546 638 aa7.21□□□□□ -1.26
UBR4-204ENST00000375254 SV2BQ7L1I2 683 aa7.21□□□□□ -1.26
UBR4-204ENST00000375254 GLT8D2Q9H1C3 349 aa7.21□□□□□ -1.26
UBR4-204ENST00000375254 DDX28Q9NUL7 540 aaKnown RBP7.21□□□□□ -1.26
UBR4-204ENST00000375254 CCT8L1PA6NM43 557 aa7.21□□□□□ -1.26
UBR4-204ENST00000375254 RPS6KA5O75582 802 aa7.21□□□□□ -1.26
UBR4-204ENST00000375254 GSNP06396 782 aa7.21□□□□□ -1.26
UBR4-204ENST00000375254 DNAL1Q4LDG9 190 aa7.21□□□□□ -1.26
UBR4-204ENST00000375254 COG1Q8WTW3 980 aa7.21□□□□□ -1.26
UBR4-204ENST00000375254 XPO4Q9C0E2 1151 aaKnown RBP7.21□□□□□ -1.26
UBR4-204ENST00000375254 TRMT44Q8IYL2 757 aaKnown RBP7.21□□□□□ -1.26
UBR4-204ENST00000375254 MCM7P33993 719 aa7.21□□□□□ -1.26
UBR4-204ENST00000375254 CTCFP49711 727 aaPredicted RBP7.21□□□□□ -1.26
UBR4-204ENST00000375254 NCAPG2Q86XI2 1143 aa7.21□□□□□ -1.26
UBR4-204ENST00000375254 GINS4Q9BRT9 223 aa7.21□□□□□ -1.26
UBR4-204ENST00000375254 SEMA3EO15041 775 aa7.21□□□□□ -1.26
UBR4-204ENST00000375254 RASSF9O75901 435 aa7.21□□□□□ -1.26
UBR4-204ENST00000375254 MFSD6Q6ZSS7 791 aa7.21□□□□□ -1.26
UBR4-204ENST00000375254 MARK3P27448 753 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 TBL3Q12788 808 aaKnown RBP7.2□□□□□ -1.26
UBR4-204ENST00000375254 CECR2Q9BXF3 1484 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 CARMIL1Q5VZK9 1371 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 PASKQ96RG2 1323 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 NVLO15381 856 aaKnown RBP7.2□□□□□ -1.26
UBR4-204ENST00000375254 MSH2P43246 934 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 CCT2P78371 535 aaKnown RBP7.2□□□□□ -1.26
UBR4-204ENST00000375254 SCRN1Q12765 414 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 OLFML1Q6UWY5 402 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 ASIC3Q9UHC3 531 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 KDM2BQ8NHM5 1336 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 OLR1P78380 273 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 IRAK1P51617 712 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 POSTNQ15063 836 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.2□□□□□ -1.261e-8■■□□□ 12.4
UBR4-204ENST00000375254 PARVGQ9HBI0 331 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 HAUS2Q9NVX0 235 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 MYL1P05976 194 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 DACT3Q96B18 629 aaPredicted RBP7.2□□□□□ -1.26
UBR4-204ENST00000375254 GNA11P29992 359 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 GGCXP38435 758 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 GUCY2FP51841 1108 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 KLHL30Q0D2K2 578 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 LRIG3Q6UXM1 1119 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 UBE2Q1Q7Z7E8 422 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 PLEKHM2Q8IWE5 1019 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 CCDC127Q96BQ5 260 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 CAND2O75155 1236 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 KCNA2P16389 499 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 NSMCE1Q8WV22 266 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 NAPBQ9H115 298 aa7.2□□□□□ -1.26
UBR4-204ENST00000375254 ITGB3BPQ13352 177 aaPredicted RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms