RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 NUP88Q99567 741 aaPredicted RBP20.29■□□□□ 0.84
PFDN6-201ENST00000374606 HTATIP2Q9BUP3 242 aa20.29■□□□□ 0.84
PFDN6-201ENST00000374606 SLC26A6Q9BXS9 759 aa20.29■□□□□ 0.84
PFDN6-201ENST00000374606 RNF26Q9BY78 433 aaPredicted RBP20.29■□□□□ 0.84
PFDN6-201ENST00000374606 ORC3Q9UBD5 711 aaPredicted RBP20.29■□□□□ 0.84
PFDN6-201ENST00000374606 CPA4Q9UI42 421 aa20.29■□□□□ 0.84
PFDN6-201ENST00000374606 KIF3AQ9Y496 699 aa20.29■□□□□ 0.84
PFDN6-201ENST00000374606 LOC285556D6RIA3 1793 aa20.29■□□□□ 0.84
PFDN6-201ENST00000374606 C19orf81C9J6K1 198 aa20.28■□□□□ 0.84
PFDN6-201ENST00000374606 FMNL1O95466 1100 aaPredicted RBP20.28■□□□□ 0.84
PFDN6-201ENST00000374606 CTGFP29279 349 aa20.28■□□□□ 0.84
PFDN6-201ENST00000374606 AKAP17AQ02040 695 aaKnown RBP20.28■□□□□ 0.84
PFDN6-201ENST00000374606 KIAA1755Q5JYT7 1200 aa20.28■□□□□ 0.84
PFDN6-201ENST00000374606 ANKRD23Q86SG2 305 aa20.28■□□□□ 0.84
PFDN6-201ENST00000374606 TRIM47Q96LD4 638 aa20.28■□□□□ 0.84
PFDN6-201ENST00000374606 WDR46O15213 610 aaKnown RBP20.27■□□□□ 0.84
PFDN6-201ENST00000374606 OSBPP22059 807 aa20.27■□□□□ 0.84
PFDN6-201ENST00000374606 GJA8P48165 433 aa20.27■□□□□ 0.84
PFDN6-201ENST00000374606 HMGCS2P54868 508 aa20.27■□□□□ 0.84
PFDN6-201ENST00000374606 FUT2Q10981 343 aa20.27■□□□□ 0.84
PFDN6-201ENST00000374606 FAM83BQ5T0W9 1011 aa20.27■□□□□ 0.84
PFDN6-201ENST00000374606 C12orf42Q96LP6 360 aa20.27■□□□□ 0.84
PFDN6-201ENST00000374606 SPZ1Q9BXG8 430 aa20.27■□□□□ 0.84
PFDN6-201ENST00000374606 EMILIN3Q9NT22 766 aa20.27■□□□□ 0.84
PFDN6-201ENST00000374606 TMOD4Q9NZQ9 345 aa20.27■□□□□ 0.84
PFDN6-201ENST00000374606 MYPNQ86TC9 1320 aa20.27■□□□□ 0.83
PFDN6-201ENST00000374606 PDHXO00330 501 aa20.26■□□□□ 0.83
PFDN6-201ENST00000374606 GJB1P08034 283 aa20.26■□□□□ 0.83
PFDN6-201ENST00000374606 VCAM1P19320 739 aa20.26■□□□□ 0.83
PFDN6-201ENST00000374606 SMARCA1P28370 1054 aa20.26■□□□□ 0.83
PFDN6-201ENST00000374606 IKQ13123 557 aaPredicted RBP20.26■□□□□ 0.83
PFDN6-201ENST00000374606 UBA5Q9GZZ9 404 aa20.26■□□□□ 0.83
PFDN6-201ENST00000374606 CPVLQ9H3G5 476 aa20.26■□□□□ 0.83
PFDN6-201ENST00000374606 ADGRA2Q96PE1 1338 aa20.26■□□□□ 0.83
PFDN6-201ENST00000374606 CXCL11O14625 94 aa20.25■□□□□ 0.83
PFDN6-201ENST00000374606 DEXIO95424 95 aa20.25■□□□□ 0.83
PFDN6-201ENST00000374606 CCL5P13501 91 aa20.25■□□□□ 0.83
PFDN6-201ENST00000374606 UBXN2AP68543 259 aa20.25■□□□□ 0.83
PFDN6-201ENST00000374606 SH3D19Q5HYK7 790 aa20.25■□□□□ 0.83
PFDN6-201ENST00000374606 TTBK2Q6IQ55 1244 aa20.25■□□□□ 0.83
PFDN6-201ENST00000374606 UBE2Q1Q7Z7E8 422 aa20.25■□□□□ 0.83
PFDN6-201ENST00000374606 WASF1Q92558 559 aa20.25■□□□□ 0.83
PFDN6-201ENST00000374606 KCNH4Q9UQ05 1017 aa20.25■□□□□ 0.83
PFDN6-201ENST00000374606 NR2E3Q9Y5X4 410 aa20.25■□□□□ 0.83
PFDN6-201ENST00000374606 RANBP2P49792 3224 aaKnown RBP20.25■□□□□ 0.83
PFDN6-201ENST00000374606 TMEM232C9JQI7 657 aa20.24■□□□□ 0.83
PFDN6-201ENST00000374606 PRPF3O43395 683 aaKnown RBP20.24■□□□□ 0.83
PFDN6-201ENST00000374606 CYTH3O43739 400 aa20.24■□□□□ 0.83
PFDN6-201ENST00000374606 FDPSP14324 419 aaKnown RBP20.24■□□□□ 0.83
PFDN6-201ENST00000374606 PDCP20941 246 aa20.24■□□□□ 0.83
PFDN6-201ENST00000374606 SLC16A2P36021 539 aa20.24■□□□□ 0.83
PFDN6-201ENST00000374606 STAT2P52630 851 aa20.24■□□□□ 0.83
PFDN6-201ENST00000374606 SLC35G1Q2M3R5 365 aa20.24■□□□□ 0.83
PFDN6-201ENST00000374606 FAM160B2Q86V87 743 aa20.24■□□□□ 0.83
PFDN6-201ENST00000374606 RRP36Q96EU6 259 aaKnown RBP20.24■□□□□ 0.83
PFDN6-201ENST00000374606 TANGO6Q9C0B7 1094 aa20.24■□□□□ 0.83
PFDN6-201ENST00000374606 RNF208Q9H0X6 261 aa20.24■□□□□ 0.83
PFDN6-201ENST00000374606 BIN2Q9UBW5 565 aaPredicted RBP20.24■□□□□ 0.83
PFDN6-201ENST00000374606 SEC63Q9UGP8 760 aaKnown RBP20.24■□□□□ 0.83
PFDN6-201ENST00000374606 A0A0G2JLL6 359 aaPredicted RBP20.23■□□□□ 0.83
PFDN6-201ENST00000374606 SYDE2Q5VT97 1194 aa20.23■□□□□ 0.83
PFDN6-201ENST00000374606 BTNL9Q6UXG8 535 aa20.23■□□□□ 0.83
PFDN6-201ENST00000374606 PRRT2Q7Z6L0 340 aaPredicted RBP20.23■□□□□ 0.83
PFDN6-201ENST00000374606 CHURC1Q8WUH1 139 aa20.23■□□□□ 0.83
PFDN6-201ENST00000374606 PIBF1Q8WXW3 757 aa20.23■□□□□ 0.83
PFDN6-201ENST00000374606 PARK7Q99497 189 aaKnown RBP20.23■□□□□ 0.83
PFDN6-201ENST00000374606 PRO3102Q9H379 93 aa20.23■□□□□ 0.83
PFDN6-201ENST00000374606 RPAP3Q9H6T3 665 aaPredicted RBP20.23■□□□□ 0.83
PFDN6-201ENST00000374606 RIOX1Q9H6W3 641 aa20.23■□□□□ 0.83
PFDN6-201ENST00000374606 FEM1BQ9UK73 627 aa20.23■□□□□ 0.83
PFDN6-201ENST00000374606 V9GY48 417 aaPredicted RBP20.23■□□□□ 0.83
PFDN6-201ENST00000374606 PARP14Q460N5 1801 aa20.23■□□□□ 0.83
PFDN6-201ENST00000374606 hCG_1642624A0A1W2PR95 340 aa20.22■□□□□ 0.83
PFDN6-201ENST00000374606 FARP2O94887 1054 aaPredicted RBP20.22■□□□□ 0.83
PFDN6-201ENST00000374606 DDIT3P35638 169 aa20.22■□□□□ 0.83
PFDN6-201ENST00000374606 FCGRTP55899 365 aa20.22■□□□□ 0.83
PFDN6-201ENST00000374606 HOMER1Q86YM7 354 aa20.22■□□□□ 0.83
PFDN6-201ENST00000374606 ADGRF4Q8IZF3 695 aa20.22■□□□□ 0.83
PFDN6-201ENST00000374606 ALG1Q9BT22 464 aa20.22■□□□□ 0.83
PFDN6-201ENST00000374606 VAT1LQ9HCJ6 419 aa20.22■□□□□ 0.83
PFDN6-201ENST00000374606 CIZ1Q9ULV3 898 aaPredicted RBP20.22■□□□□ 0.83
PFDN6-201ENST00000374606 PLA2G6O60733 806 aa20.21■□□□□ 0.83
PFDN6-201ENST00000374606 SCG2P13521 617 aa20.21■□□□□ 0.83
PFDN6-201ENST00000374606 FOSBP53539 338 aa20.21■□□□□ 0.83
PFDN6-201ENST00000374606 PRKCZQ05513 592 aa20.21■□□□□ 0.83
PFDN6-201ENST00000374606 LARP1BQ659C4 914 aaKnown RBP20.21■□□□□ 0.83
PFDN6-201ENST00000374606 GADL1Q6ZQY3 521 aa20.21■□□□□ 0.83
PFDN6-201ENST00000374606 PROCA1Q8NCQ7 364 aaPredicted RBP20.21■□□□□ 0.83
PFDN6-201ENST00000374606 SLAIN1Q8ND83 568 aa20.21■□□□□ 0.83
PFDN6-201ENST00000374606 U2AF1L4Q8WU68 220 aaKnown RBP20.21■□□□□ 0.83
PFDN6-201ENST00000374606 PIGSQ96S52 555 aa20.21■□□□□ 0.83
PFDN6-201ENST00000374606 MGAMO43451 1857 aa20.2■□□□□ 0.82
PFDN6-201ENST00000374606 BAZ2BQ9UIF8 2168 aaKnown RBP20.2■□□□□ 0.82
PFDN6-201ENST00000374606 BCRP11274 1271 aa20.2■□□□□ 0.82
PFDN6-201ENST00000374606 SYT1P21579 422 aa20.2■□□□□ 0.82
PFDN6-201ENST00000374606 MOGSQ13724 837 aa20.2■□□□□ 0.82
PFDN6-201ENST00000374606 TRIM29Q14134 588 aa20.2■□□□□ 0.82
PFDN6-201ENST00000374606 PFKFB3Q16875 520 aaPredicted RBP20.2■□□□□ 0.82
PFDN6-201ENST00000374606 C8orf76Q96K31 380 aa20.2■□□□□ 0.82
PFDN6-201ENST00000374606 AIFM3Q96NN9 605 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms